Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq6 262 5e-65 seq7 167 3e-36 seq3 113 6e-20 >seq6 Length=915354 Score = 262 bits (290), Expect = 5e-65 Identities = 1414/2240 (63%), Gaps = 51/2240 (2%) Strand=Plus/Plus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 || || ||||| | | || ||||||| || | | |||||||| || || || ||| Sbjct 272531 GTGAATTGAATAGCTGCAGAAGCGGCTTGTGTTCTCAAGTAGTACATACCAGTCTTGAGA 272590 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919 || |||| ||||| || |||||||| |||| ||| || | || || || Sbjct 272591 CCCTTCTTCCAACCGTAGAAGTGCATACTTGTTAATTTACCCATTGTGGGGGCACGC-AT 272649 Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979 ||| ||||||| || ||| |||||| ||||| | | | || |||||||| | || Sbjct 272650 GTGGATATTCAAGGAATGAGATTGATCAATGAACACAGCACGATCAGCAGCCATGTCTA- 272708 Query 70980 GATCGTCT-TTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 71037 || | | | |||| | ||||||||| | || || || || || || || |||| |||| Sbjct 272709 GAACATGTCTTTGAGAAATTTCCCACACCGTCTTGTACAAATCT-TTGATTTCTTGTGGA 272767 Query 71038 AGGTTTGTA---TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCA 71094 | |||| | ||||||||||| ||| ||| | ||| || | ||| || |||| Sbjct 272768 ATATTTGGAATGTTCTGAATGGAACCATTATCAGTAATGATTTGTTGTTTCATACTTTCA 272827 Query 71095 TTCCATAATTTTCTCTCGGTTAAAAC-TCTAAGGAGATGAGGATTAACTACTTGAAATTC 71153 | ||| | | || ||| | | ||| || | |||||||| | ||| ||||| Sbjct 272828 TCCCAAATACCTAAATCTACCAAATCCTTTAACAAG-TATGGATTAACAATTTGGAATTC 272886 Query 71154 TCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATT 71213 ||||| || || | ||||| ||| || ||| || || ||||| | | || || | Sbjct 272887 ACCAGATAAAACACGACGAGAGTACATGTTAGATGTGTAAGGTTCGAAACATTCGTTGTA 272946 Query 71214 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAG 71273 ||||| ||||| | ||||| ||||| |||||||| ||||| |||| ||||| | Sbjct 272947 ACCCAAGATTTGTGATGTTGAAGCAGTGGGCATAGGGGCCACTAATAATGAGTTTCTTAC 273006 Query 71274 ACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGG-TACAA 71332 ||||||| | || | | | | | |||||||| ||| | || || || | | Sbjct 273007 ACCATGTTCTTTAATGCCTTGTCTCAATGGTTCCCAATCCCATAATTCTGAAGGATTCTT 273066 Query 71333 CNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATG--ATCCTGCATATGTATC 71390 | | | | || || || | | ||| |||| ||| Sbjct 273067 CTCCCAAAGATCAAATTGTAA--AAGACCTTGGGAGA-TAGGGGAACCTTCATAGGTAGA 273123 Query 71391 GTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGT 71450 || | || | | | ||| | ||||||| || || || || | ||||| || Sbjct 273124 ATAAGTACCGTGAATCTTGGCCAATTCACAAGATTGTTCCAAGGCACCGTGGTAAATAGT 273183 Query 71451 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAG 71510 ||| ||||| | | || | || ||| || || |||||||| | || | Sbjct 273184 TTCAAAAATTTGTTGGTTCAATATTTTTGCCTCAGGAGATTCAAATGGCAGACGCAACAT 273243 Query 71511 AATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGA 71570 ||||| | ||||||||| || | ||| |||| | |||||||| |||||| |||| || Sbjct 273244 CATAAAAGTGTCTGCTAACCCATTAACACCAAGTGCAATAGGTCTATGTCTCATATTGGA 273303 Query 71571 AATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGAC 71630 | | ||||| |||| || || || ||| ||| || | || || | ||| | | Sbjct 273304 TCTCTTGGCTTCAGGAACTGGGTAGTAGTTACGATCAATGACCTTGTTCAAATTAC-GTG 273362 Query 71631 TATTA-CTTTGACCACATCCTTTAGTTTGAGAAAATCAAATC---------TCCCATCTA 71680 || || |||| | || || | || |||| |||| | | | |||||| Sbjct 273363 TAATAGCTTTAGCGACTTCATGTAATTTGGCAAAACTGTACCATTGTTCCTTACCATCTG 273422 Query 71681 -------TTACAAACACGTTC--AAGGCAACAGATGCCAGATTACAAACGGCTACCTCAT 71731 || || ||| | | || || | ||| || | ||||||||| || |||| Sbjct 273423 CCGATACTTCCACACAAGATGGTAATGCGATAGAAGCTAAATTACAAACTGCAGTTTCAT 273482 Query 71732 TAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 71791 || | |||| | |||||| || | ||| | | || || || | | Sbjct 273483 CCTTGTCAGAGTATTCCACGATTTCACAACATAAATTGGAAGATTTAATCACACCAAGGT 273542 Query 71792 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTT 71851 | | ||| |||||||||| ||||| ||||||||||| || || || || |||||||||| Sbjct 273543 TCTTTTGGTTACTCTTTTCATTACATGCATCCTTATAGAGCATGAAAGGTGTACCAGTTT 273602 Query 71852 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATC 71911 || | || | ||||| ||| || | ||| | | |||| | ||| | || | || | Sbjct 273603 CAGTTTGTGCTTCTAAAATGGCATACCACAACTTTTGAGCTCTAATTGTCTT--TCTACC 273660 Query 71912 TCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTC 71969 | |||| ||| || || || ||| ||| || || || || | ||| | Sbjct 273661 ACGGCCTTCTTGTTCATAACGTTCGTACAATTTTTCAAATTCTTCACCATATACATCTGC 273720 Query 71970 TAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTT--ACTCGT 72027 ||| |||||| |||| | ||| | | | || ||| ||| ||| || ||| || ||| Sbjct 273721 TAAACCAGGAGCTTCACTTGGAGAGAAAAGTGTCCATTCTTCAT--TCTTTTCGACACGT 273778 Query 72028 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCG 72087 ||||| || | |||||||||||| | ||| |||| |||||| | | | || || Sbjct 273779 TTCATGAACAAATCAGGAATCCATAATGCTGGGAATAAATCTCTTGCACGAATTTCTTCT 273838 Query 72088 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 72147 || || |||||| | | ||| | ||| | | ||||| || ||||| |||||||| Sbjct 273839 TTACCATGGTTCTTTCTGATATCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAA 273898 Query 72148 TATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 72207 || | ||| | |||| || | || || || || ||||| | || | || ||||| Sbjct 273899 TAAAGGGCGAATGCTCCAGGTCTCTTATTGCCACCTTGATCCACATAACGTGCAGTGTTG 273958 Query 72208 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 72267 ||| |||| | | |||||| || | ||||||||| | |||||| || || | || || Sbjct 273959 TTAAAAACACGAACCATTGGGATTAAACCATTGGAAGTACCATTAGTACCTGCAATGTAA 274018 Query 72268 CTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 72327 || | | |||||| || ||| | || || || || || | || || || Sbjct 274019 GAACCCGTAGAACGAATGTTATGAATATGCAACCCAATACCACCAGCAGTCTTGGAAATC 274078 Query 72328 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 72387 | || ||| |||||| | |||||| || || || || ||| || |||| | Sbjct 274079 ATGGCACATTCTTTTAATGAATCATAAATACCTTCAATGGAATCGTCTTTCATCGCCACA 274138 Query 72388 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 72447 || ||||| | |||||| || | ||| || ||||| || | || |||||||| Sbjct 274139 AGGAAACAAGATGCCATTTGTGGATGTGGAGTACCTGCATTGAAAAGAGTTGGAGAAGCA 274198 Query 72448 TGCGTAAACCATTTTTCA--GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCC 72505 || | || || ||| |||| | |||||| || || || || |||| ||||| Sbjct 274199 TGGATGAA--ATACCTCAATGACATCAAATTGTAAGTTTCGATCGCAGATTTGATATCTT 274256 Query 72506 ATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGT 72565 ||| || || | || | ||||| | ||| || ||||| ||| | || Sbjct 274257 CACCATGAATACCCAAACTAACTCTCATTATTAGATGTTGTGGTCTCTCAGCAGTCAACC 274316 Query 72566 TATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 72625 ||| || | |||||||| || ||| ||||| || ||||| ||||| ||| || | Sbjct 274317 CATTGATCCTTAACAAGTAAGAACGTTCTAAAGTCTTGAAACCGAAATAATTGAATTGGA 274376 Query 72626 AGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCA 72685 | |||| ||||| | |||| | || || | || |||||| | | |||| || | | Sbjct 274377 AATCTCTGTCGTAGACAATAGCTGAGTTCAATTCATCCTTGTTGGTCATAACGATGTTGA 274436 Query 72686 TGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATA 72745 | | ||||| || || ||||| || || ||||| ||||| | | | | Sbjct 274437 AAATCTCATCAGAAATCATAGGGGAATGGACACCGTTAGCTGGATTCACATAATGGTACA 274496 Query 72746 AATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTA 72805 ||| || |||| ||| | || | |||| |||||| |||||||| || || | Sbjct 274497 GATCAGAGATTACTTGTGAGAATTGCTTCGTGGTTTGCTTGTGAAGATTTGAAACAGCAA 274556 Query 72806 TTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCT 72864 |||| |||||||| | || ||||| ||||| || || || || || | |||| Sbjct 274557 TTCTAGCGGCTAGTGTAGCGTAATCAGGATGAACAGTGGT-CATGTAAGCACATGTTTCA 274615 Query 72865 GCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTC 72924 ||||||| | | || ||||| || || || || || | || | || |||| | Sbjct 274616 GCTGCCAAATTATCTAATTCCACTGTAGTAACACCTTCGTAGACACCAGAAATAATACGC 274675 Query 72925 ATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATA 72984 || || || | || ||||||||| || | ||| ||||| ||||| || ||| Sbjct 274676 TGAGTAATCTTGACAGCGTCTATATGAGAAGGATCTAACCCATAGCATAACTTCGATATA 274735 Query 72985 CGAGACGTGATTTTATCAAA 73004 || | || || ||||| || Sbjct 274736 CGTGCTGTAATCTTATCGAA 274755 >seq7 Length=888749 Score = 167 bits (184), Expect = 3e-36 Identities = 394/593 (66%), Gaps = 8/593 (1%) Strand=Plus/Plus Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123 ||| || || ||| |||| ||| || ||||| | ||| |||||||| || || || || Sbjct 211019 ACAGGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTTAG 211078 Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183 || ||||| || || ||| || | |||||| || | || || || || || ||||| Sbjct 211079 ACCTGGCATCAGACCCTTCTTCTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAAGAA 211138 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT-- 42241 ||| ||||| ||||| ||||| || | | ||| || ||||| ||| |||| | Sbjct 211139 GATACCTTCAACTGCGGCAAATGCGACTAATCTTTCAGCATAAAGGGCTTCTTCATCTTG 211198 Query 42242 -ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 |||||| | ||||| || ||||| | | | | || || |||| |||||||| Sbjct 211199 AATCCACCTAATGGCCCATTCTGCCTTTTCTCTGATTGGTGGGATGTTTTCAATGGCATT 211258 Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360 ||| | | | || || || || || ||||| ||||| | | ||| | Sbjct 211259 AAATAAGAAATCAGCCTCCTTGGAGTCCCTACTGTAGGTATCAATCAACAAAGAGTACGT 211318 Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420 ||| || || |||||||| || || || || |||||||| || |||| || | || Sbjct 211319 TTCAGAGTGGATGTTTTCCATCATGATTTGGAACCCGTAGAAGCACTTGGCTTCAGGAAT 211378 Query 42421 CTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGC 42480 || ||||| | | | || || | ||||| || ||||| || ||||| || || Sbjct 211379 TTGCACTTCGGCAGAGAAGTTCTCGACCAAATTCTCATTCACAATACCGTCGGATGCAGC 211438 Query 42481 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATTCC 42536 || ||||| | || | || ||| || |||| || ||| || || |||| Sbjct 211439 GAAGAACGCTAGAACTCTTGAAATGAAAAATCTTTCACCCTC-GTTCATCTTGTTGTTCC 211497 Query 42537 AATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCT 42596 | |||| | ||| | | ||| | ||||||| | ||||| |||||||||||||| Sbjct 211498 AGTCATCCAAATCCTGCTGCAAATCGATTTCTTCTGCTGTCCAGAATGATGCTTCTGCTC 211557 Query 42597 TTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTA 42649 | || || | |||||| || || |||||||| ||||||| |||||||||| Sbjct 211558 TCTTGTAGGCTTGCCAGATTTCGTGGTATTGAATAGGGAAAAGAACAAATCTA 211610 >seq3 Length=1313108 Score = 113 bits (124), Expect = 6e-20 Identities = 376/573 (66%), Gaps = 23/573 (4%) Strand=Plus/Plus Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCGGCATATTGTATAATTT 71755 || || || |||||||| || || ||| ||||| | | | | ||| | || ||| | Sbjct 878676 GCGACCGAAGCCAGATTGCACACTGCTGTCTCATCTTTGGAACT--ATACTCTACAATCT 878733 Query 71756 CAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTAC 71815 || ||| | |||| | | || ||||| || ||||||| |||||| || ||||| Sbjct 878734 CACAGCATAAATTAGAAGATTTAATGGTACCCAAATTTTTTTGATTTGATTTAAAGTTAC 878793 Query 71816 ACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTT 71875 | | |||||| ||||| ||||||||| || ||||| | || | || || ||| Sbjct 878794 ATGAATCCTTGTAAAGCATAAACGGACCGCCTGTTTCTACTTGGGCTTGTAGAAT----- 878848 Query 71876 TCCAGACGAC----TC-GAGCCTTTATTATATTCTT--GTATCTCTTTTCTCTTTCGTAT 71928 | ||||| || || |||| || | ||| | ||| || | ||| ||| Sbjct 878849 TTCAGACCACAGCTTCTGAGCTTTGACACGTTTCATTGGTAATTCCGTGGA--TTCATAT 878906 Query 71929 TGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTC 71988 ||| ||||| |||||||| | || | ||| || || || ||||| Sbjct 878907 TGTTCATATAGCTCCTCGAACTCTTTGCCGTAGACATCACTTAGGCCCGGTGCTTCATCT 878966 Query 71989 GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATC 72048 |||| | | ||||| ||||| | | | ||| |||||||| || | ||| || ||| Sbjct 878967 GGACTGAAAAGAGACCAATCTCCGTTAGACTGTACGCGTTTCATGAACAAATCTGGTATC 879026 Query 72049 CAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC-TGTATTCTTTTTAAG 72107 || || || || |||| |||||||| ||| || || || || || || || |||| Sbjct 879027 CATAGTGCAATGAATAAATCTCTGGCTCTCAATTCATCCTTACCATGGTTTTTTCTTAAT 879086 Query 72108 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA-CTCCCG 72166 | | || | | || ||| |||||||| ||||||| ||||| | || | || | Sbjct 879087 TGCAAAAAAT-CAAAAACATCTGAATGCCAGGGTTCCAGATATATA-CAGTATGCACCTG 879144 Query 72167 GCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTG 72226 | || |||||||||||||| |||| |||||||| || ||||| |||| | | ||| | Sbjct 879145 GACGCTTGTTTCCTCCCTGGTCTACATATCTAGCCGTATTATTGAAAACACGAAGCATGG 879204 Query 72227 GAATAATACCATTGGATGCACCATT-GGTCCCG 72258 | || | ||| | || |||||| | ||||| Sbjct 879205 GGATTAGTCCACTAGAAATACCATTAGATCCCG 879237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138763759520