Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq7 113 4e-20 seq6 95.1 1e-14 >seq7 Length=888749 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 18827 CTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCG 18886 |||| |||| ||||| ||||| ||||| || ||||||||||| | | |||| || | Sbjct 735497 CTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGTGTTCTGCCA 735438 Query 18887 TCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTG 18946 || |||||||| ||||| ||| |||| |||||||| || || || | || || ||| Sbjct 735437 TCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACCTTCCTTG 735378 Query 18947 TCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATG 19006 || ||| || || || | | ||| || ||| || ||| ||| | || || Sbjct 735377 TCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGATA 735318 Query 19007 GTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 |||||||| |||| ||| ||||| ||||||||||| Sbjct 735317 GTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 735283 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18814 TCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGC 18873 ||| |||| | ||||| |||| ||||| |||||||| || || || |||||||| | Sbjct 736422 TCCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGA 736363 Query 18874 CATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGG 18933 || ||| | |||| |||| || ||||| ||| |||| | |||||| || || || Sbjct 736362 CAGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGG 736303 Query 18934 CACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGT 18993 | || || ||||| |||||| ||| || | ||| |||||| || ||| Sbjct 736302 AATACCTTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCAC 736243 Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 ||| | || ||||||||||| || || ||||| ||||| |||||||| Sbjct 736242 TTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 736195 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| || || || |||| ||||| ||||| ||||| ||||| |||||||| | | Sbjct 735965 CCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 735906 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | |||| || | |||||||| ||| |||| |||||||| || || ||| Sbjct 735905 AGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGA 735846 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || || ||||| || || || || | | ||| ||||| || ||| | Sbjct 735845 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACT 735786 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | || || || ||||| |||| ||| || || ||||||||||| Sbjct 735785 TCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 735739 >seq6 Length=915354 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||| |||| |||| |||||| || || |||||||| || ||||| || | | Sbjct 604728 CCACCTCTCAATCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 604787 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | | || |||| || ||||| ||| | || | ||| || || || || Sbjct 604788 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 604847 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | ||||| ||||| ||| || || || | | | | ||| || || || | Sbjct 604848 ATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 604907 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 || | ||||||||| ||||| || ||||| ||||||||||| ||||| || Sbjct 604908 TCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 604957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572537264488