Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08]
52 sequences; 10,081,862 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq7 113 4e-20
seq6 95.1 1e-14
>seq7
Length=888749
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 18827 CTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCG 18886
|||| |||| ||||| ||||| ||||| || ||||||||||| | | |||| || |
Sbjct 735497 CTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGTGTTCTGCCA 735438
Query 18887 TCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTG 18946
|| |||||||| ||||| ||| |||| |||||||| || || || | || || |||
Sbjct 735437 TCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACCTTCCTTG 735378
Query 18947 TCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATG 19006
|| ||| || || || | | ||| || ||| || ||| ||| | || ||
Sbjct 735377 TCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGATA 735318
Query 19007 GTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|||||||| |||| ||| ||||| |||||||||||
Sbjct 735317 GTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 735283
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 18814 TCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGC 18873
||| |||| | ||||| |||| ||||| |||||||| || || || |||||||| |
Sbjct 736422 TCCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGA 736363
Query 18874 CATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGG 18933
|| ||| | |||| |||| || ||||| ||| |||| | |||||| || || ||
Sbjct 736362 CAGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGG 736303
Query 18934 CACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGT 18993
| || || ||||| |||||| ||| || | ||| |||||| || |||
Sbjct 736302 AATACCTTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCAC 736243
Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
||| | || ||||||||||| || || ||||| ||||| ||||||||
Sbjct 736242 TTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 736195
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| || || || |||| ||||| ||||| ||||| ||||| |||||||| | |
Sbjct 735965 CCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 735906
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| | |||| || | |||||||| ||| |||| |||||||| || || |||
Sbjct 735905 AGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGA 735846
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| || || ||||| || || || || | | ||| ||||| || ||| |
Sbjct 735845 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACT 735786
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | || || || ||||| |||| ||| || || |||||||||||
Sbjct 735785 TCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 735739
>seq6
Length=915354
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| ||| |||| |||| |||||| || || |||||||| || ||||| || | |
Sbjct 604728 CCACCTCTCAATCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 604787
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| | | || |||| || ||||| ||| | || | ||| || || || ||
Sbjct 604788 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 604847
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| ||||| ||||| ||| || || || | | | | ||| || || || |
Sbjct 604848 ATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 604907
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044
|| | ||||||||| ||||| || ||||| ||||||||||| ||||| ||
Sbjct 604908 TCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 604957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414572537264488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |