Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq7 125 6e-24 >seq7 Length=888749 Score = 125 bits (138), Expect = 6e-24 Identities = 481/746 (64%), Gaps = 12/746 (2%) Strand=Plus/Plus Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901 |||||||| ||| ||||| || ||| ||||| || ||||| || || || || Sbjct 210711 TTTGACATGACACCAGCCTTTTGGTAATCGGAGACTCTCTTCTCAAAGAAATTGGTCTTA 210770 Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTA 12961 || ||| || || ||||||||||| ||||| |||||| | | ||||| |||| Sbjct 210771 CCCGCTAGAGAGATGTTTTCCATAAAGTCGAATGGATTTGTGACATTGTAGTACTTTTCG 210830 Query 12962 CACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCA 13021 || | | | || | |||||| ||||| || || | ||| || ||||||| | Sbjct 210831 TTACCAAGAGCCACTAGAAGTCTGTCGGCAACGAATTCGACGTATTGGTTCATTAGCGCG 210890 Query 13022 CAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCA 13081 |||||| || | | || || | ||| ||| || | | ||||| || | Sbjct 210891 GCGTTCATGCCCAGCAGAGCCACGGGGAGAGCATCTTCAAAGTATCTCTTTTCAATTGAA 210950 Query 13082 ACTGCTTCGATAACTATGTCT--CTTATTACGTTCTCTAATGGAGGATTTGATAGA--TG 13137 || ||||| ||| || | | | | || ||| | | | | | |||| | || Sbjct 210951 ACAGCTTCAGTAATAATCTTTTCCACAATA---TCTGGACTTG-GTCTGTGATTCAAGTG 211006 Query 13138 CTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTT 13197 || | | ||| ||||| || ||||| ||||| ||||| | || | ||||| Sbjct 211007 AGCGAATAATAGACAGGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGTT 211066 Query 13198 TGAAAATGTTAGACCCGGCATAAG-CCCTCGTTTTTTAATCCAAAATATAGCAGCAAACG 13256 || || |||||||| ||||| || |||| || || || |||||| || ||||| || | Sbjct 211067 AGAGAAGGTTAGACCTGGCATCAGACCCTTCTTCTTCAA-CCAAAAGATGGCAGCGAAAG 211125 Query 13257 AACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCAT-ACGTA 13315 | || || || || || ||||||||||| ||||| || | || |||||| ||| | | Sbjct 211126 ACCCTGAGAAGAAGATACCTTCAACTGCGGCAAATGCGACTAATCTTTCAGCATAAAGGG 211185 Query 13316 CTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATA 13375 || | || | | |||||| | ||||||| | ||| |||| | | | || Sbjct 211186 CT-TCTTCATCTTGAATCCACCTAATGGCCCATTCTGCCTTTTCTCTGATTGGTGGGATG 211244 Query 13376 TTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATC 13435 ||||| || || |||||||| ||| ||||| ||| | | || ||||| ||| Sbjct 211245 TTTTCAATGGCATTAAATAAGAAATCAGCCTCCTTGGAGTCCCTACTGTAGGTATCAATC 211304 Query 13436 AATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACAT 13495 || || ||| |||| || || || ||||||||| |||||||| || || || || Sbjct 211305 AACAAAGAGTACGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAACCCGTAGAAGCAC 211364 Query 13496 CTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATC 13555 | || || | | || ||||||| | || | || | || || || || || || Sbjct 211365 TTGGCTTCAGGAATTTGCACTTCGGCAGAGAAGTTCTCGACCAAATTCTCATTCACAATA 211424 Query 13556 CCGTCACTAGCAGCaaaaaaaGCAAG 13581 ||||| ||||| || || || || Sbjct 211425 CCGTCGGATGCAGCGAAGAACGCTAG 211450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982126864904