Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq7 145 7e-30 seq6 116 3e-21 >seq7 Length=888749 Score = 145 bits (160), Expect = 7e-30 Identities = 173/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || ||||| |||| | |||| ||||| |||||||||||| || | ||| | Sbjct 736201 TTTGCATACCACCTCTTAATCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGT 736142 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 |||| || || || |||||| || || || || ||||||||| |||||| || | Sbjct 736141 AATCAGACAGGGTTCTGCCATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGT 736082 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 ||||||||||||| || || || | ||| |||| ||||||| | ||| ||||| | Sbjct 736081 CTGGAGGAATACCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAG 736022 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || | ||||| ||||| ||||| ||||| || || ||||| ||||| Sbjct 736021 ACTCGACTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCAT 735967 Score = 136 bits (150), Expect = 4e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| | |||||||||||||||||||||||||| | ||| || || | Sbjct 849269 CCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 849328 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | ||| |||| || || || | |||||||||||||| || || || || Sbjct 849329 AACGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGG 849388 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| ||||| | ||| |||| ||||||| | | | ||||||| | ||||| Sbjct 849389 ATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACC 849448 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 || | |||||||| || ||||| | ||| || ||||| Sbjct 849449 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 849486 Score = 129 bits (142), Expect = 5e-25 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | |||||||||| |||||||||||| || | || ||||| Sbjct 735509 CCACCTCTTAGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAG-- 735452 Query 94841 ATAGTGTT--GGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 |||||||| | ||| |||||||| || || |||| || | ||| || || || || | Sbjct 735451 ATAGTGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTG 735392 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||||||||| ||||| | ||| |||| ||||||| | ||| ||||| | |||| Sbjct 735391 GAATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGA 735332 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | ||||| ||||| ||||| ||||| || || || || ||||| Sbjct 735331 CTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 735283 Score = 125 bits (138), Expect = 6e-24 Identities = 171/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || ||||| |||| ||| |||||||| | ||| |||||||| || | | Sbjct 735293 AAAATTTGCATACCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATG 735234 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || ||||| || ||| | || ||||| || ||||| |||| || ||||| || Sbjct 735233 TTGTAATCAGACAAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGT 735174 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 ||||| |||||||||||||| ||||| | || |||| ||| ||| | ||| || ||| Sbjct 735173 TGATCCGGAGGAATACCTTCGTTGTCTTGGATCTTTGACTTAACGTTGTCGATGGTATCA 735114 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | || || || || ||||| | ||| || || || |||||||| Sbjct 735113 GAAGATTCAACCTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 735055 Score = 125 bits (138), Expect = 6e-24 Identities = 171/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || ||||| | || | |||||||| | |||||||||||| || | | Sbjct 735749 AAAATTTGCATACCACCTCTTAGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATG 735690 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || ||||| | ||| || |||||| || || || || |||| || ||||| || Sbjct 735689 TTGTAATCAGATAAAGTTCTGCCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGT 735630 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || ||||||||||| ||||||||||| | || || | |||||| | ||| ||| ||| Sbjct 735629 TGGTCTGGAGGAATGCCTTCTTTGTCCTGGATCTTAGATTTGACGTTGTCGATAGTATCA 735570 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | |||||||| || || || ||||| || || || |||||||| Sbjct 735569 GAAGATTCCACTTCCAAAGTGATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCAT 735511 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94779 CTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGC 94838 |||| ||||| | || || |||||||||| |||||| || || || | ||| ||||| Sbjct 736423 CTCCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAG 736364 Query 94839 TCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 || ||| | || |||| || || || |||| || ||||| || || || |||| Sbjct 736363 ACAGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAG 736304 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||||||||| ||||| | |||||| | || || ||| ||| |||| || | Sbjct 736303 GAATACCTTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCA 736244 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | ||||||||||| ||||| | |||||||||||||| ||||| Sbjct 736243 CTTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 736195 Score = 118 bits (130), Expect = 1e-21 Identities = 167/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || ||||| |||| ||| |||||||||| |||||||||||| || | ||| | Sbjct 735973 TTTGCATACCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGT 735914 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 |||| || ||| | || || | ||||| || |||| |||| ||| || || | Sbjct 735913 AATCAGACAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGT 735854 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 |||| ||||||||||| ||||| | || || | ||||||| | ||| || |||| Sbjct 735853 CTGGGGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAG 735794 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | ||||| || || || || ||||| || || || || ||||| Sbjct 735793 ATTCCACTTCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 735739 >seq6 Length=915354 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| | ||||||||||| || ||||||||||| | ||| || ||| | Sbjct 604728 CCACCTCTCAATCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 604787 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | ||| |||| || || || ||||||| |||||||| || || || || Sbjct 604788 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 604847 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| || ||||| | ||| || | |||||| | | | |||||||| || || Sbjct 604848 ATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 604907 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || ||||| || || || | ||| || ||||| |||||||| Sbjct 604908 TCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 604954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290908610720