Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq6 295 8e-75 seq3 113 6e-20 >seq6 Length=915354 Score = 295 bits (326), Expect = 8e-75 Identities = 1446/2271 (64%), Gaps = 75/2271 (3%) Strand=Plus/Plus Query 61982 ATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACAT 62041 || ||| || | ||||||||||| | || || |||| || || | | |||||||| Sbjct 272518 ATTCTTATCGATGGTGAATTGAATAGCTGCAGAAGCGGCTTGTGTTCTCAAGTAGTACAT 272577 Query 62042 TCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACT 62101 || || || ||||| |||| ||||| || |||||||| |||| ||| | Sbjct 272578 ACCAGTCTTGAGACCCTTCTTCCAACCGTAGAAGTGCATACTTGTTAATTTACCCATTGT 272637 Query 62102 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 62161 || | || |||||||||| || ||| |||||| ||||| | | | || || Sbjct 272638 GGGGGCACGCATGTGGATATTCAAGGAATGAGATTGATCAATGAACACAGCACGATCAGC 272697 Query 62162 AGCCATTTTTATGATCGTCT-TTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTA 62219 |||||| | || || | | | |||| | ||||||||| | || || || || || || Sbjct 272698 AGCCATGTCTA-GAACATGTCTTTGAGAAATTTCCCACACCGTCTTGTACAAATCT-TTG 272755 Query 62220 ATATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTC 62276 || |||| ||||| |||| | ||||||||||| ||| ||| | || || || Sbjct 272756 ATTTCTTGTGGAATATTTGGAATGTTCTGAATGGAACCATTATCAGTAATGAT----TTG 272811 Query 62277 TTGATCTCATCATTCCAT---AATTTTCTC--TCGGTTAAAAC-TCTAAGGAGATGCGGA 62330 ||| | |||| || ||| || | || || ||| | | ||| || | ||| Sbjct 272812 TTGTT-TCATACTTTCATCCCAAATACCTAAATCTACCAAATCCTTTAACAAG-TATGGA 272869 Query 62331 TTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGT 62390 ||||| | ||| ||||| ||||| || || | |||| ||| || ||| || || ||| Sbjct 272870 TTAACAATTTGGAATTCACCAGATAAAACACGACGAGAGTACATGTTAGATGTGTAAGGT 272929 Query 62391 TCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 62450 || | | || || | ||||| ||||| | ||||| ||||| |||||||| ||||| Sbjct 272930 TCGAAACATTCGTTGTAACCCAAGATTTGTGATGTTGAAGCAGTGGGCATAGGGGCCACT 272989 Query 62451 AATAAACTATTTCTAAGACCGTATGTTCTGATTTTAT--CTTTT---AGAGGTTCCCAAT 62505 ||||| ||||| | ||| ||||||| || || ||| | | |||||||||| Sbjct 272990 AATAATGAGTTTCTTACACC--ATGTTCT---TTAATGCCTTGTCTCAATGGTTCCCAAT 273044 Query 62506 TCCAAAGATCCGACGG-TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCG 62564 ||| | || || || | | | ||||| || ||| | || | Sbjct 273045 CCCATAATTCTGAAGGATTCTTCTCCCAAAGATCAAA-TTGTAAAAGACCTTG---GGAG 273100 Query 62565 -TACG--ATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCC 62621 || | | ||| |||| ||| || | || | ||| || | ||||||| Sbjct 273101 ATAGGGGAACCTTCATAGGTAGAATAAGTACCGTGAATCTTGGCCAATTCACAAGATTGT 273160 Query 62622 TCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGT-GCTTCCAG 62680 || || ||||||| ||||| ||||| || || || || || || || | || || || Sbjct 273161 TCCAAGGCACCGTGGTAAATAGTTTCAAAAAT-TTGTTGGTTCAATATTTTTGCCTC-AG 273218 Query 62681 GCTAT-CAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATAC 62739 | || ||||||| | || | ||||| | ||| ||||| || | |||||||| Sbjct 273219 GAGATTCAAATGGCAGACGCAACATCATAAAAGTGTCTGCTAACCCATTAACACCAAGTG 273278 Query 62740 CGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATAT 62799 | ||||||||||||||| |||| || | | ||||| |||| || || || ||| || Sbjct 273279 CAATAGGTCTATGTCTCATATTGGATCTCTTGGCTTCAGGAACTGGGTAGTAGTTACGAT 273338 Query 62800 CTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAA- 62858 | || | || || | ||| | ||| |||| | || || | | |||| |||| Sbjct 273339 CAATGACCTTGTTCAAATTACGTGTAATAGCTTTAGCGACTTCATGTAATTTGGCAAAAC 273398 Query 62859 --TCAAATCGC------CCATCTA-------TTACAAACATGTTC--AAGGCAACAGATG 62901 | || | |||||| || || ||| | | || || | ||| | Sbjct 273399 TGTACCATTGTTCCTTACCATCTGCCGATACTTCCACACAAGATGGTAATGCGATAGAAG 273458 Query 62902 CCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGAT 62961 | | ||||||||| || |||| || | |||| | || ||| || | || Sbjct 273459 CTAAATTACAAACTGCAGTTTCATCCTTGTCAGAGTATTCCACGATTTCACAACATAAAT 273518 Query 62962 TACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 63021 | | | || || || | || | ||| |||||||||| ||||| |||||||||| Sbjct 273519 TGGAAGATTTAATCACACCAAGGTTCTTTTGGTTACTCTTTTCATTACATGCATCCTTAT 273578 Query 63022 AAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 63081 | || ||||| || |||||||||||| | || | ||||| ||| || | ||| | | Sbjct 273579 AGAGCATGAAAGGTGTACCAGTTTCAGTTTGTGCTTCTAAAATGGCATACCACAACTTTT 273638 Query 63082 GAGCCTTTATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTC 63139 |||| | ||| | ||| || | | | |||| ||| || || |||||| ||| Sbjct 273639 GAGCTCTAATTGTC--TTTCTACCACGGCCTTCTTGTTCATAACGTTCGTACAATTTTTC 273696 Query 63140 GAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCA 63199 || || || || | |||| | || |||||| |||| ||| | | | | ||| Sbjct 273697 AAATTCTTCACCATATACATCTGCTAAACCAGGAGCTTCACTTGGAGAGAAAAGTGTCCA 273756 Query 63200 CTCTCCGTCATCCTTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63256 ||| |||| ||| || |||||||| || | |||||||||||| | ||| || Sbjct 273757 TTCT---TCATTCTTTTCGACACGTTTCATGAACAAATCAGGAATCCATAATGCTGGGAA 273813 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316 || |||||| | | | ||| || || || |||||| | | ||| | ||| | | Sbjct 273814 TAAATCTCTTGCACGAATTTCTTCTTTACCATGGTTCTTTCTGATATCAATGAAATCAAA 273873 Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376 ||||| || ||||| |||||||| || | ||| | ||||||| | || || || || Sbjct 273874 GATATCTGAGTGCCATGGTTCCAAATAAAGGGCGAATGCTCCAGGTCTCTTATTGCCACC 273933 Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436 ||||| | || | || ||||| ||| |||| | | |||||| || | ||| || || Sbjct 273934 TTGATCCACATAACGTGCAGTGTTGTTAAAAACACGAACCATTGGGATTAAACCATTGGA 273993 Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63496 ||||||| ||||| | || || || | | |||||| ||| ||| | || Sbjct 273994 AGTACCATTAGTACCTGCAATGTAAGAACCCGTAGAACGAATGTTATGAATATGCAACCC 274053 Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTC 63556 || || || || | || || || | || ||| |||||| | ||||| ||||| || Sbjct 274054 AATACCACCAGCAGTCTTGGAAATCATGGCACATTCTTTTAATGAATCATAAATACCTTC 274113 Query 63557 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63616 ||| ||| || |||| | || ||||| | |||||| || | ||| || Sbjct 274114 AATGGAATCGTCTTTCATCGCCACAAGGAAACAAGATGCCATTTGTGGATGTGGAGTACC 274173 Query 63617 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA--GAAAGTAGATTGTAC 63674 ||||| || | || |||||||| || | || || ||| || | | |||||| Sbjct 274174 TGCATTGAAAAGAGTTGGAGAAGCATGGATGAA--ATACCTCAATGACATCAAATTGTAA 274231 Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734 || || || || || | ||||| |||||| || | || | ||||| | Sbjct 274232 GTTTCGATCGCAGATTTGATATCTTCACCATGAATACCCAAACTAACTCTCATTATTAGA 274291 Query 63735 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63794 || || ||||| ||| | || || || | |||||||| || ||| ||||| Sbjct 274292 TGTTGTGGTCTCTCAGCAGTCAACCCATTGATCCTTAACAAGTAAGAACGTTCTAAAGTC 274351 Query 63795 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 63854 || ||||| ||||| ||| || || |||| ||||| | |||| | ||||| | || | Sbjct 274352 TTGAAACCGAAATAATTGAATTGGAAATCTCTGTCGTAGACAATAGCTGAGTTCAATTCA 274411 Query 63855 TCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCA 63914 ||||| | | |||| || | | | | ||||| || || ||||| || Sbjct 274412 TCCTTGTTGGTCATAACGATGTTGAAAATCTCATCAGAAATCATAGGGGAATGGACACCG 274471 Query 63915 TTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTT 63974 || ||||| ||||| | | | | ||| || |||| ||| | || | ||| Sbjct 274472 TTAGCTGGATTCACATAATGGTACAGATCAGAGATTACTTGTGAGAATTGCTTCGTGGTT 274531 Query 63975 TCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGT 64034 | |||||| |||||||| || || ||||| |||||||| | || ||||| ||||| Sbjct 274532 TGCTTGTGAAGATTTGAAACAGCAATTCTAGCGGCTAGTGTAGCGTAATCAGGATGAACA 274591 Query 64035 GTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 64093 || || || || || | |||| ||||||| | | || ||||| || || || || || Sbjct 274592 GTGGT-CATGTAAGCACATGTTTCAGCTGCCAAATTATCTAATTCCACTGTAGTAACACC 274650 Query 64094 ATTATATATTCCTTGAATAACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTT 64153 | || | || ||||| | || || || | || ||||||||| | | Sbjct 274651 TTCGTAGACACCAGAAATAATACGCTGAGTAATCTTGACAGCGTCTATATGAGAAGGATC 274710 Query 64154 TAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCAAACATGAC 64204 ||| ||||| ||||| || ||||| | || || ||||| || |||| Sbjct 274711 TAACCCATAGCATAACTTCGATATACGTGCTGTAATCTTATCGAATCTGAC 274761 >seq3 Length=1313108 Score = 113 bits (124), Expect = 6e-20 Identities = 382/584 (65%), Gaps = 22/584 (4%) Strand=Plus/Plus Query 62873 TATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCAT--TAGCA 62930 || || |||| || || || || || |||||||| || || ||| ||||| | | | Sbjct 878657 TACTATAAACGTGGGCAGTGCGACCGAAGCCAGATTGCACACTGCTGTCTCATCTTTGGA 878716 Query 62931 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGT 62990 | ||| | || |||||| ||| | |||| | | || || || || ||||||| | Sbjct 878717 ACT--ATACTCTACAATCTCACAGCATAAATTAGAAGATTTAATGGTACCCAAATTTTTT 878774 Query 62991 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63050 ||||| || |||||| | |||||| ||||| || || ||| || ||||| | Sbjct 878775 TGATTTGATTTAAAGTTACATGAATCCTTGTAAAGCATAAACGGACCGCCTGTTTCTACT 878834 Query 63051 TGAGATTCTATAATCGCTTTCCAGACGAC----TC-GAGCCTTTATTA--TAGATTTGTA 63103 || | || || ||| | ||||| || || |||| || | | ||| ||| Sbjct 878835 TGGGCTTGTAGAAT-----TTCAGACCACAGCTTCTGAGCTTTGACACGTTTCATTGGTA 878889 Query 63104 TCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63163 ||| | ||| ||| || ||| | |||||||| | || | |||| Sbjct 878890 ATTCCGTGGA--TTCATATTGTTCATATAGCTCCTCGAACTCTTTGCCGTAGACATCACT 878947 Query 63164 CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63223 | || || |||||| |||| | | ||||| ||||||| | || || ||||| Sbjct 878948 TAGGCCCGGTGCTTCATCTGGACTGAAAAGAGACCAATCTCCGTTAGACTGTACGCGTTT 879007 Query 63224 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63283 ||| || | ||| || ||||| || || || |||| |||||||| ||| ||| || || Sbjct 879008 CATGAACAAATCTGGTATCCATAGTGCAATGAATAAATCTCTGGCTCTCAATTCATCCTT 879067 Query 63284 TCC-TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63342 || || || || |||| | | || | | || ||| |||||||| ||||||| | Sbjct 879068 ACCATGGTTTTTTCTTAATTGCAAAAAAT-CAAAAACATCTGAATGCCAGGGTTCCAGAT 879126 Query 63343 ATATGGCCATAA-CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63401 |||| | || | || || || |||||||||||||| |||| |||||||| || ||| Sbjct 879127 ATATA-CAGTATGCACCTGGACGCTTGTTTCCTCCCTGGTCTACATATCTAGCCGTATTA 879185 Query 63402 TTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63445 || |||| | | ||| || || | || | || |||||||| Sbjct 879186 TTGAAAACACGAAGCATGGGGATTAGTCCACTAGAAATACCATT 879229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946795084320