Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08]
52 sequences; 10,081,862 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq6 179 1e-39
seq1 127 5e-24
>seq6
Length=915354
Score = 179 bits (198), Expect = 1e-39
Identities = 937/1482 (63%), Gaps = 44/1482 (3%)
Strand=Plus/Minus
Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621
||||| | | |||||| || |||| ||||||| ||| | ||||| || ||| |
Sbjct 274191 CCAACTCTTTTCAATGCAGGTACTCCACATCCACAAATGGCATCTTGTTTCCTTGTGGCG 274132
Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681
||||| ||||||||||| || ||||| | ||| || | || | ||||| | ||||||
Sbjct 274131 ATGAAAGACGATTCCATTGAAGGTATTTATGATTCATTAAAAGAATGTGCCATGATTTCC 274072
Query 363682 AAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTGCACAGAACAGTTACA 363739
|||| ||| || || ||||| || || || || || ||||| | | |||||
Sbjct 274071 AAGACTGCTGGTGGTATTGGGTTGCAT--ATTCATAACATTCGTTCTACGGGTTCTTACA 274014
Query 363740 TTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798
|| || || || ||| || ||||| | | || ||| ||||||| ||| ||||
Sbjct 274013 TTGCAGGTACTAATGG-TACTTCCAATGGTTTAATCCCAATGGTTCGTGTTTTTAACAAC 273955
Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858
||||| | || || || || ||||| ||| | || || || || | ||| |
Sbjct 273954 ACTGCACGTTATGTGGATCAAGGTGGCAATAAGAGACCTGGAGCATTCGCCCTTTATTTG 273895
Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAG 363918
|| || || | ||||| ||||| || |||| || | || ||| || |||||
Sbjct 273894 GAACCATGGCACTCAGATATCTTTGATTTCATTGATATCAGAAAGAACCATGGTAAAGAA 273835
Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978
||| | |||||| | ||| | ||| ||| | ||| || |||| || ||||| ||
Sbjct 273834 GAAATTCGTGCAAGAGATTTATTCCCAGCATTATGGATTCCTGATTTGTTCATGAAACGT 273775
Query 363979 GTGG--AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCG 364036
|| | | | | | ||||| ||| |||| || | ||| ||| ||| ||| | | |
Sbjct 273774 GTCGAAAAGAATG-AAGAA-TGGACACTTTTCTCTCCAAGTGAAGCTCCTGGTTTAGCAG 273717
Query 364037 ATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTC 364096
|||||| ||||| || | || | |||||| |||||| || || | |
Sbjct 273716 ATGTATATGGTGAAGAATTTGAAAAATTGTACGAACGTTATGAACAAGAAGGCCGTGGTA 273657
Query 364097 GTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAG 364156
| ||||||||| || || ||| | |||| |||||| | || | || | ||| || |
Sbjct 273656 GAAAGACAATTAGAGCTCAAAAGTTGTGGTATGCCATTTTAGAAGCACAAACTGAAACTG 273597
Query 364157 GAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTG 364216
| ||||| | ||| | || || ||| | || || ||| ||||| || ||||||
Sbjct 273596 GTACACCTTTCATGCTCTATAAGGATGCATGTAATGAAAAGAGTAACCAAAAGAACCTTG 273537
Query 364217 GTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGA 364276
|| ||| | ||| ||||| || || | |||||| | | || || |
Sbjct 273536 GTGTGATTAAATCTTCCAATTTATGTTGTGAAATCGTGGAATACTCTGACAAGGATGAAA 273477
Query 364277 CTGCCGTATGTAACCTTGCGTCGATCGC-------GCTT-----------CCGGC-GTTT 364317
|||| || ||||| | || || ||||| ||| |||| | |
Sbjct 273476 CTGCAGTTTGTAATTTAGCTTCTATCGCATTACCATCTTGTGTGGAAGTATCGGCAGATG 273417
Query 364318 GTA---AAAGATGGTAC--TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTA 364372
||| || ||||||| ||||| ||| | | |||| || | | | ||
Sbjct 273416 GTAAGGAACAATGGTACAGTTTTG-CCA-----AATTACATGAAGTCGCTAAAGCTATTA 273363
Query 364373 CTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTT 364432
| | ||| | ||||||| || || || || || ||| ||||||||||| || | |
Sbjct 273362 CACGTAATTTGAACAAGGTCATTGATCGTAACTACTACCCAGTTCCTGAAGCCAAGAGAT 273303
Query 364433 CTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGA 364492
| |||||| | ||| | || |||| |||||||| | || | || ||| ||||||||
Sbjct 273302 CCAATATGAGACATAGACCTATTGCACTTGGTGTTAATGGGTTAGCAGACACTTTTATGA 273243
Query 364493 TGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAA 364552
|| | || ||||||| || ||||| || | | || | | || |||||||
Sbjct 273242 TGTTGCGTCTGCCATTTGAATCTCCTGAGGCAAAAATATTGAACCAACAAATTTTTGAAA 273183
Query 364553 CAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACT 364612
| || || | || || || ||||| ||||| || | | || | || |
Sbjct 273182 CTATTTACCACGGTGCCTTGGAACAATCTTGTGAATTGGCCAAGATTCACGGTACTTATT 273123
Query 364613 CTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCA 364672
|||| ||||| || |||||| | || || || || || |||||||| ||| | |
Sbjct 273122 CTACCTATGAAGGTTCCCCTATCTCCCAAGGTCTTTTACAATTTGATCTTTGGGAGAAGA 273063
Query 364673 CGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAA--CGTTAAGAAGCATGGTAC 364730
|| || | |||| | ||||| || | | ||| | |||| | ||||||
Sbjct 273062 ATCCTTCAGAATTATGGGATTGGGA-AC-CATTGAGACAAGGCATTAAAGAACATGGTGT 273005
Query 364731 TCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAA 364790
| ||||| | | || || |||||||| ||||| || |||| ||| | || |
Sbjct 273004 AAGAAACTCATTATTAGTGGCCCCTATGCCCACTGCTTCAACATCACAAATCTTGGGTTA 272945
Query 364791 CAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGA 364850
|||||| || |||||||| | ||| || | || || || || ||| | || || ||
Sbjct 272944 CAACGAATGTTTCGAACCTTACACATCTAACATGTACTCTCGTCGTGTTTTATCTGGTGA 272885
Query 364851 ATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA 364910
||| | | |||||| ||| | | |||||| | || || | |||| |||
Sbjct 272884 ATTCCAAATTGTTAATCCATACTTGTTAAAGGATTTGGTAGATTTAGGTATTTGGGATGA 272825
Query 364911 CAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCC 364970
|| ||||| | | ||||| | | ||||||||| | |||||||||||| ||||
Sbjct 272824 AAGTATGAAACAACAAATCATTACTGATAATGGTTCCATTCAGAACATTCCAAATATTCC 272765
Query 364971 AGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC 365012
| |||| | || | | ||||| || || |||||||||||
Sbjct 272764 ACAAGAAATCAAAGATTTGTACAAGACGGTGTGGGAAATTTC 272723
>seq1
Length=1544349
Score = 127 bits (140), Expect = 5e-24
Identities = 351/533 (66%), Gaps = 19/533 (4%)
Strand=Plus/Minus
Query 111420 GTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGAC 111479
|| ||||||||||| || |||||||| | || | ||| ||| | | || | ||||
Sbjct 1390423 GTTAAAATTTGGGAAGGCAATGGATCCAGAGAGTATCTGGATAAAATCGGATTGCACGAC 1390364
Query 111480 A-ACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGA 111538
| ||| |||||||| || || || || ||||| || |||||| | || |||||||| |
Sbjct 1390363 AGACGT-GAAGGTGACCTTGGTCCTGTCTACGGTTTCCAATGGAGACATTTTGGTGCCAA 1390305
Query 111539 CTACAAAACCATGCACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCAT 111598
|||| |||| ||||| ||| | ||| || |||||||| || | || ||
Sbjct 1390304 ATACAGAACCTGTGACGACGATTATACTGGACAAGGGTTCGATCAATTGAAGGAGGTGAT 1390245
Query 111599 TGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAA 111658
|||| || | || || |||||| | ||| | |||||||||||||| ||||| ||
Sbjct 1390244 TGATAAATTAAAAAATAACCCATATGATCGGAGAATTATTATGAGTGCGTGGAATCCGCC 1390185
Query 111659 TGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGC-CAGTTTTATGT--AC- 111714
| || | ||||||| | ||||||||||| | ||| | | || ||||| || ||
Sbjct 1390184 AGACTTTCCACTAATGGCATTACCACCATGTCA-CGTATTTTCACAATTTTACGTTAACT 1390126
Query 111715 ------ACGACGGGATGC------TTTCATGCCAAATGTATCAGCGATCTGCTGATATTG 111762
| || || | || | ||||| | | |||||||| |||| |||||| |
Sbjct 1390125 TCCCCAAGGAGGGCAAGCCTAAATTGTCATGTCTACTGTATCAGAGATCCTGTGATATGG 1390066
Query 111763 GTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATT 111822
| | || ||||| || || |||||| |||||||| | || | || || |||
Sbjct 1390065 GGTTGGGAGTTCCATTCAACATTGCATCCTACGCACTTTTGACCAAGATGATTGCACATG 1390006
Query 111823 TTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGCGCATGTTTACACAA 111882
| || | |||| |||||||||| || || || ||||| || | ||||
Sbjct 1390005 TGTGCGATATGGAACCTAGTGAATTCATCCATACAATGGGTGATGCTCACATCTACAAGG 1389946
Query 111883 ACCACATTGATGCACTTAAAACACAGTTGAAGCGCAAACCATACGATTTCCCA 111935
| || | ||||| || ||| ||| |||| | | ||| |||||||||
Sbjct 1389945 ATCATGTGGATGCTCTGAAAGAACAATTGAGTAGGACTCCAACTGATTTCCCA 1389893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352731640664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |