Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq6 179 1e-39 seq1 127 5e-24 >seq6 Length=915354 Score = 179 bits (198), Expect = 1e-39 Identities = 937/1482 (63%), Gaps = 44/1482 (3%) Strand=Plus/Minus Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621 ||||| | | |||||| || |||| ||||||| ||| | ||||| || ||| | Sbjct 274191 CCAACTCTTTTCAATGCAGGTACTCCACATCCACAAATGGCATCTTGTTTCCTTGTGGCG 274132 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| ||||||||||| || ||||| | ||| || | || | ||||| | |||||| Sbjct 274131 ATGAAAGACGATTCCATTGAAGGTATTTATGATTCATTAAAAGAATGTGCCATGATTTCC 274072 Query 363682 AAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTGCACAGAACAGTTACA 363739 |||| ||| || || ||||| || || || || || ||||| | | ||||| Sbjct 274071 AAGACTGCTGGTGGTATTGGGTTGCAT--ATTCATAACATTCGTTCTACGGGTTCTTACA 274014 Query 363740 TTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798 || || || || ||| || ||||| | | || ||| ||||||| ||| |||| Sbjct 274013 TTGCAGGTACTAATGG-TACTTCCAATGGTTTAATCCCAATGGTTCGTGTTTTTAACAAC 273955 Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858 ||||| | || || || || ||||| ||| | || || || || | ||| | Sbjct 273954 ACTGCACGTTATGTGGATCAAGGTGGCAATAAGAGACCTGGAGCATTCGCCCTTTATTTG 273895 Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAG 363918 || || || | ||||| ||||| || |||| || | || ||| || ||||| Sbjct 273894 GAACCATGGCACTCAGATATCTTTGATTTCATTGATATCAGAAAGAACCATGGTAAAGAA 273835 Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978 ||| | |||||| | ||| | ||| ||| | ||| || |||| || ||||| || Sbjct 273834 GAAATTCGTGCAAGAGATTTATTCCCAGCATTATGGATTCCTGATTTGTTCATGAAACGT 273775 Query 363979 GTGG--AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCG 364036 || | | | | | ||||| ||| |||| || | ||| ||| ||| ||| | | | Sbjct 273774 GTCGAAAAGAATG-AAGAA-TGGACACTTTTCTCTCCAAGTGAAGCTCCTGGTTTAGCAG 273717 Query 364037 ATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTC 364096 |||||| ||||| || | || | |||||| |||||| || || | | Sbjct 273716 ATGTATATGGTGAAGAATTTGAAAAATTGTACGAACGTTATGAACAAGAAGGCCGTGGTA 273657 Query 364097 GTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAG 364156 | ||||||||| || || ||| | |||| |||||| | || | || | ||| || | Sbjct 273656 GAAAGACAATTAGAGCTCAAAAGTTGTGGTATGCCATTTTAGAAGCACAAACTGAAACTG 273597 Query 364157 GAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTG 364216 | ||||| | ||| | || || ||| | || || ||| ||||| || |||||| Sbjct 273596 GTACACCTTTCATGCTCTATAAGGATGCATGTAATGAAAAGAGTAACCAAAAGAACCTTG 273537 Query 364217 GTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGA 364276 || ||| | ||| ||||| || || | |||||| | | || || | Sbjct 273536 GTGTGATTAAATCTTCCAATTTATGTTGTGAAATCGTGGAATACTCTGACAAGGATGAAA 273477 Query 364277 CTGCCGTATGTAACCTTGCGTCGATCGC-------GCTT-----------CCGGC-GTTT 364317 |||| || ||||| | || || ||||| ||| |||| | | Sbjct 273476 CTGCAGTTTGTAATTTAGCTTCTATCGCATTACCATCTTGTGTGGAAGTATCGGCAGATG 273417 Query 364318 GTA---AAAGATGGTAC--TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTA 364372 ||| || ||||||| ||||| ||| | | |||| || | | | || Sbjct 273416 GTAAGGAACAATGGTACAGTTTTG-CCA-----AATTACATGAAGTCGCTAAAGCTATTA 273363 Query 364373 CTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTT 364432 | | ||| | ||||||| || || || || || ||| ||||||||||| || | | Sbjct 273362 CACGTAATTTGAACAAGGTCATTGATCGTAACTACTACCCAGTTCCTGAAGCCAAGAGAT 273303 Query 364433 CTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGA 364492 | |||||| | ||| | || |||| |||||||| | || | || ||| |||||||| Sbjct 273302 CCAATATGAGACATAGACCTATTGCACTTGGTGTTAATGGGTTAGCAGACACTTTTATGA 273243 Query 364493 TGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAA 364552 || | || ||||||| || ||||| || | | || | | || ||||||| Sbjct 273242 TGTTGCGTCTGCCATTTGAATCTCCTGAGGCAAAAATATTGAACCAACAAATTTTTGAAA 273183 Query 364553 CAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACT 364612 | || || | || || || ||||| ||||| || | | || | || | Sbjct 273182 CTATTTACCACGGTGCCTTGGAACAATCTTGTGAATTGGCCAAGATTCACGGTACTTATT 273123 Query 364613 CTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCA 364672 |||| ||||| || |||||| | || || || || || |||||||| ||| | | Sbjct 273122 CTACCTATGAAGGTTCCCCTATCTCCCAAGGTCTTTTACAATTTGATCTTTGGGAGAAGA 273063 Query 364673 CGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAA--CGTTAAGAAGCATGGTAC 364730 || || | |||| | ||||| || | | ||| | |||| | |||||| Sbjct 273062 ATCCTTCAGAATTATGGGATTGGGA-AC-CATTGAGACAAGGCATTAAAGAACATGGTGT 273005 Query 364731 TCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAA 364790 | ||||| | | || || |||||||| ||||| || |||| ||| | || | Sbjct 273004 AAGAAACTCATTATTAGTGGCCCCTATGCCCACTGCTTCAACATCACAAATCTTGGGTTA 272945 Query 364791 CAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGA 364850 |||||| || |||||||| | ||| || | || || || || ||| | || || || Sbjct 272944 CAACGAATGTTTCGAACCTTACACATCTAACATGTACTCTCGTCGTGTTTTATCTGGTGA 272885 Query 364851 ATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA 364910 ||| | | |||||| ||| | | |||||| | || || | |||| ||| Sbjct 272884 ATTCCAAATTGTTAATCCATACTTGTTAAAGGATTTGGTAGATTTAGGTATTTGGGATGA 272825 Query 364911 CAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCC 364970 || ||||| | | ||||| | | ||||||||| | |||||||||||| |||| Sbjct 272824 AAGTATGAAACAACAAATCATTACTGATAATGGTTCCATTCAGAACATTCCAAATATTCC 272765 Query 364971 AGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC 365012 | |||| | || | | ||||| || || ||||||||||| Sbjct 272764 ACAAGAAATCAAAGATTTGTACAAGACGGTGTGGGAAATTTC 272723 >seq1 Length=1544349 Score = 127 bits (140), Expect = 5e-24 Identities = 351/533 (66%), Gaps = 19/533 (4%) Strand=Plus/Minus Query 111420 GTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGAC 111479 || ||||||||||| || |||||||| | || | ||| ||| | | || | |||| Sbjct 1390423 GTTAAAATTTGGGAAGGCAATGGATCCAGAGAGTATCTGGATAAAATCGGATTGCACGAC 1390364 Query 111480 A-ACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGA 111538 | ||| |||||||| || || || || ||||| || |||||| | || |||||||| | Sbjct 1390363 AGACGT-GAAGGTGACCTTGGTCCTGTCTACGGTTTCCAATGGAGACATTTTGGTGCCAA 1390305 Query 111539 CTACAAAACCATGCACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCAT 111598 |||| |||| ||||| ||| | ||| || |||||||| || | || || Sbjct 1390304 ATACAGAACCTGTGACGACGATTATACTGGACAAGGGTTCGATCAATTGAAGGAGGTGAT 1390245 Query 111599 TGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAA 111658 |||| || | || || |||||| | ||| | |||||||||||||| ||||| || Sbjct 1390244 TGATAAATTAAAAAATAACCCATATGATCGGAGAATTATTATGAGTGCGTGGAATCCGCC 1390185 Query 111659 TGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGC-CAGTTTTATGT--AC- 111714 | || | ||||||| | ||||||||||| | ||| | | || ||||| || || Sbjct 1390184 AGACTTTCCACTAATGGCATTACCACCATGTCA-CGTATTTTCACAATTTTACGTTAACT 1390126 Query 111715 ------ACGACGGGATGC------TTTCATGCCAAATGTATCAGCGATCTGCTGATATTG 111762 | || || | || | ||||| | | |||||||| |||| |||||| | Sbjct 1390125 TCCCCAAGGAGGGCAAGCCTAAATTGTCATGTCTACTGTATCAGAGATCCTGTGATATGG 1390066 Query 111763 GTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATT 111822 | | || ||||| || || |||||| |||||||| | || | || || ||| Sbjct 1390065 GGTTGGGAGTTCCATTCAACATTGCATCCTACGCACTTTTGACCAAGATGATTGCACATG 1390006 Query 111823 TTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGCGCATGTTTACACAA 111882 | || | |||| |||||||||| || || || ||||| || | |||| Sbjct 1390005 TGTGCGATATGGAACCTAGTGAATTCATCCATACAATGGGTGATGCTCACATCTACAAGG 1389946 Query 111883 ACCACATTGATGCACTTAAAACACAGTTGAAGCGCAAACCATACGATTTCCCA 111935 | || | ||||| || ||| ||| |||| | | ||| ||||||||| Sbjct 1389945 ATCATGTGGATGCTCTGAAAGAACAATTGAGTAGGACTCCAACTGATTTCCCA 1389893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352731640664