Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq6 309 4e-79 seq3 127 3e-24 >seq6 Length=915354 Score = 309 bits (342), Expect = 4e-79 Identities = 1452/2274 (64%), Gaps = 81/2274 (4%) Strand=Plus/Plus Query 61837 ATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACAT 61896 || ||| || | ||||||||||| | || || |||| || || | | |||||||| Sbjct 272518 ATTCTTATCGATGGTGAATTGAATAGCTGCAGAAGCGGCTTGTGTTCTCAAGTAGTACAT 272577 Query 61897 TCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACT 61956 || || || ||||| |||| ||||| || |||||||| |||| ||| | Sbjct 272578 ACCAGTCTTGAGACCCTTCTTCCAACCGTAGAAGTGCATACTTGTTAATTTACCCATTGT 272637 Query 61957 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 62016 || | || |||||||||| || ||| |||||| ||||| | | | || || Sbjct 272638 GGGGGCACGCATGTGGATATTCAAGGAATGAGATTGATCAATGAACACAGCACGATCAGC 272697 Query 62017 AGCCATTTTTATAATC-GTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTA 62074 |||||| | || || |||||| | | ||||||||| | || || || || || || Sbjct 272698 AGCCATGTCTAGAACATGTCTTT-GAGAAATTTCCCACACCGTCTTGTACAAATCT-TTG 272755 Query 62075 ATATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTC 62131 || |||| ||||| |||| | ||||||||||| ||| ||| | || || || Sbjct 272756 ATTTCTTGTGGAATATTTGGAATGTTCTGAATGGAACCATTATCAGTAATGAT----TTG 272811 Query 62132 TTGATCTCATCATTCCAT---AATTTTCTC--TCGGTTAAAAC-TCTAAGGAGATGCGGA 62185 ||| | |||| || ||| || | || || ||| | | ||| || | ||| Sbjct 272812 TTGTT-TCATACTTTCATCCCAAATACCTAAATCTACCAAATCCTTTAACAAG-TATGGA 272869 Query 62186 TTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGT 62245 ||||| | ||| ||||| ||||| || || | |||| ||| || ||| || || ||| Sbjct 272870 TTAACAATTTGGAATTCACCAGATAAAACACGACGAGAGTACATGTTAGATGTGTAAGGT 272929 Query 62246 TCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 62305 || | | | || || | ||||| ||||| | ||||| ||||| |||||||| ||||| Sbjct 272930 TCGAAACATTCGTTGTAACCCAAGATTTGTGATGTTGAAGCAGTGGGCATAGGGGCCACT 272989 Query 62306 AATAAACTATTTCTAAGACCGTATGTTCTGATTTTAT--CTTTT---AGAGGTTCCCAAT 62360 ||||| ||||| | ||| ||||||| || || ||| | | |||||||||| Sbjct 272990 AATAATGAGTTTCTTACACC--ATGTTCT---TTAATGCCTTGTCTCAATGGTTCCCAAT 273044 Query 62361 TCCAAAGATCCGACGG-TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCG 62419 ||| | || || || | | | ||||| || ||| | || | Sbjct 273045 CCCATAATTCTGAAGGATTCTTCTCCCAAAGATCAAA-TTGTAAAAGACCTTG---GGAG 273100 Query 62420 -TACG--ATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCC 62476 || | | ||| |||| ||| || | || | ||| || | ||||||| Sbjct 273101 ATAGGGGAACCTTCATAGGTAGAATAAGTACCGTGAATCTTGGCCAATTCACAAGATTGT 273160 Query 62477 TCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGC-GCTTCCAG 62535 || || ||||||| ||||| ||||| || || || || || || || || || || Sbjct 273161 TCCAAGGCACCGTGGTAAATAGTTTCAAAAAT-TTGTTGGTTCAATATTTTTGCCTC-AG 273218 Query 62536 GCTAT-CAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATAC 62594 | || ||||||| | || | ||||| | ||||||||| || | |||||||| Sbjct 273219 GAGATTCAAATGGCAGACGCAACATCATAAAAGTGTCTGCTAACCCATTAACACCAAGTG 273278 Query 62595 CGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATAT 62654 | ||||||||||||||| |||| || | | ||||| |||| || || || ||| || Sbjct 273279 CAATAGGTCTATGTCTCATATTGGATCTCTTGGCTTCAGGAACTGGGTAGTAGTTACGAT 273338 Query 62655 CTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAA- 62713 | || | || || | ||| | ||| |||| | || || | | |||| |||| Sbjct 273339 CAATGACCTTGTTCAAATTACGTGTAATAGCTTTAGCGACTTCATGTAATTTGGCAAAAC 273398 Query 62714 --TCAAATCGC------CCATCTA-------TTACAAACATGTTC--AATGCAACAGATG 62756 | || | |||||| || || ||| | | ||||| | ||| | Sbjct 273399 TGTACCATTGTTCCTTACCATCTGCCGATACTTCCACACAAGATGGTAATGCGATAGAAG 273458 Query 62757 CCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGAT 62816 | | ||||||||| || |||| || | |||| | || ||| || | || Sbjct 273459 CTAAATTACAAACTGCAGTTTCATCCTTGTCAGAGTATTCCACGATTTCACAACATAAAT 273518 Query 62817 TACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 62876 | | | || || || | || | ||| |||||||||| ||||| |||||||||| Sbjct 273519 TGGAAGATTTAATCACACCAAGGTTCTTTTGGTTACTCTTTTCATTACATGCATCCTTAT 273578 Query 62877 AAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 62936 | || ||||| || |||||||||||| | || | ||||| ||| || | ||| | | Sbjct 273579 AGAGCATGAAAGGTGTACCAGTTTCAGTTTGTGCTTCTAAAATGGCATACCACAACTTTT 273638 Query 62937 GAGCCTTTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTC 62994 |||| | ||| | ||| || | | |||| ||| || || |||||| ||| Sbjct 273639 GAGCTCTAATTGTC--TTTCTACCACGGCCTTCTTGTTCATAACGTTCGTACAATTTTTC 273696 Query 62995 GAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCA 63054 || || || || | |||| | | |||||| |||| ||| | | | | ||| Sbjct 273697 AAATTCTTCACCATATACATCTGCTAAACCAGGAGCTTCACTTGGAGAGAAAAGTGTCCA 273756 Query 63055 CTCTCCGTCATCCTTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63111 ||| |||| ||| || |||||||| || | |||||||||||| | ||| || Sbjct 273757 TTCT---TCATTCTTTTCGACACGTTTCATGAACAAATCAGGAATCCATAATGCTGGGAA 273813 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 || |||||| | | | ||| || || || |||||| | | ||| | ||| | | Sbjct 273814 TAAATCTCTTGCACGAATTTCTTCTTTACCATGGTTCTTTCTGATATCAATGAAATCAAA 273873 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231 ||||| || ||||| |||||||| || | ||| | ||||||| | || || || || Sbjct 273874 GATATCTGAGTGCCATGGTTCCAAATAAAGGGCGAATGCTCCAGGTCTCTTATTGCCACC 273933 Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291 ||||| | || | || ||||| ||| |||| | | |||||| || | ||||||||| Sbjct 273934 TTGATCCACATAACGTGCAGTGTTGTTAAAAACACGAACCATTGGGATTAAACCATTGGA 273993 Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63351 |||||||| || |||| || || || | | |||||| ||| ||| | || Sbjct 273994 AGTACCATTAGTACCTGCAATGTAAGAACCCGTAGAACGAATGTTATGAATATGCAACCC 274053 Query 63352 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 63411 || || || || | || || || | || ||| |||||| | |||||| || || || Sbjct 274054 AATACCACCAGCAGTCTTGGAAATCATGGCACATTCTTTTAATGAATCATAAATACCTTC 274113 Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63471 || ||| || |||| | || ||||| | |||||| || | ||| || Sbjct 274114 AATGGAATCGTCTTTCATCGCCACAAGGAAACAAGATGCCATTTGTGGATGTGGAGTACC 274173 Query 63472 CGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCA--GAAAGTAGATTGTAC 63529 ||||| || | || |||||||| || | || || ||| || | | |||||| Sbjct 274174 TGCATTGAAAAGAGTTGGAGAAGCATGGATGAA--ATACCTCAATGACATCAAATTGTAA 274231 Query 63530 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63589 || || || || || | ||||| |||||| || | || | ||||| | Sbjct 274232 GTTTCGATCGCAGATTTGATATCTTCACCATGAATACCCAAACTAACTCTCATTATTAGA 274291 Query 63590 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63649 || || ||||| ||| | || || || | |||||||| || ||| ||||| Sbjct 274292 TGTTGTGGTCTCTCAGCAGTCAACCCATTGATCCTTAACAAGTAAGAACGTTCTAAAGTC 274351 Query 63650 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 63709 || ||||| ||||| ||| || || |||| ||||| | |||| | ||||| | || | Sbjct 274352 TTGAAACCGAAATAATTGAATTGGAAATCTCTGTCGTAGACAATAGCTGAGTTCAATTCA 274411 Query 63710 TCCTTATATTTGTTAACTACATCCATGGTAAT---ACTTGAAATAATAGGAAAATGTTTC 63766 ||||| | | |||| | | || ||| | ||||| ||||| |||| Sbjct 274412 TCCTTGTTGGTCATAACGATGT---TGAAAATCTCATCAGAAATCATAGGGGAATGGACA 274468 Query 63767 CCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 63826 || || ||||| ||||| | | | | ||| || |||| ||| | || | Sbjct 274469 CCGTTAGCTGGATTCACATAATGGTACAGATCAGAGATTACTTGTGAGAATTGCTTCGTG 274528 Query 63827 GTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGT 63886 |||| ||||| |||||||| || || |||||||||||||| | || ||||| ||||| Sbjct 274529 GTTTGCTTGTGAAGATTTGAAACAGCAATTCTAGCGGCTAGTGTAGCGTAATCAGGATGA 274588 Query 63887 TGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTAC 63945 || || || || || | |||| ||||||| | | || ||||| || || || || Sbjct 274589 ACAGTGGT-CATGTAAGCACATGTTTCAGCTGCCAAATTATCTAATTCCACTGTAGTAAC 274647 Query 63946 ACCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGT 64005 ||| | || | || |||| | || || || | || ||||||||| || Sbjct 274648 ACCTTCGTAGACACCAGAAATAATACGCTGAGTAATCTTGACAGCGTCTATATGAGAAGG 274707 Query 64006 GTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGAC 64059 | ||| ||||| ||||| || ||||| | ||| || ||||| || |||| Sbjct 274708 ATCTAACCCATAGCATAACTTCGATATACGTGCTGTAATCTTATCGAATCTGAC 274761 >seq3 Length=1313108 Score = 127 bits (140), Expect = 3e-24 Identities = 514/796 (65%), Gaps = 24/796 (3%) Strand=Plus/Plus Query 62728 TATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT--TAGCA 62785 || || |||| || || ||| || || |||||||| || || ||| ||||| | | | Sbjct 878657 TACTATAAACGTGGGCAGTGCGACCGAAGCCAGATTGCACACTGCTGTCTCATCTTTGGA 878716 Query 62786 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 62845 | ||| | || |||||| ||| | |||| | | || ||||| || ||||||| | Sbjct 878717 ACT--ATACTCTACAATCTCACAGCATAAATTAGAAGATTTAATGGTACCCAAATTTTTT 878774 Query 62846 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 62905 ||||| || |||||| | |||||| ||||| || || ||| || ||||| | Sbjct 878775 TGATTTGATTTAAAGTTACATGAATCCTTGTAAAGCATAAACGGACCGCCTGTTTCTACT 878834 Query 62906 TGAGATTCTATAATCGCTTTCCAGACGAC----TC-GAGCCTTTATTA--TAGATTTGTA 62958 || | || || ||| | ||||| || || |||| || | | ||| ||| Sbjct 878835 TGGGCTTGTAGAAT-----TTCAGACCACAGCTTCTGAGCTTTGACACGTTTCATTGGTA 878889 Query 62959 TCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63018 || | ||| ||| || ||| | |||||||| | || | |||| Sbjct 878890 ATTCCGTGGA--TTCATATTGTTCATATAGCTCCTCGAACTCTTTGCCGTAGACATCACT 878947 Query 63019 CAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63078 || || || |||||| |||| | | ||||| ||||||| | || || ||||| Sbjct 878948 TAGGCCCGGTGCTTCATCTGGACTGAAAAGAGACCAATCTCCGTTAGACTGTACGCGTTT 879007 Query 63079 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63138 ||| || | ||| || ||||| || || || |||| |||||||| ||| ||| || || Sbjct 879008 CATGAACAAATCTGGTATCCATAGTGCAATGAATAAATCTCTGGCTCTCAATTCATCCTT 879067 Query 63139 TCC-TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63197 || || || || |||| | | || | | || ||| |||||||| ||||||| | Sbjct 879068 ACCATGGTTTTTTCTTAATTGCAAAAAAT-CAAAAACATCTGAATGCCAGGGTTCCAGAT 879126 Query 63198 ATATGGCCATAA-CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63256 |||| | || | || || || |||||||||||||| |||| |||||||| || ||| Sbjct 879127 ATATA-CAGTATGCACCTGGACGCTTGTTTCCTCCCTGGTCTACATATCTAGCCGTATTA 879185 Query 63257 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAG 63316 || |||| | | ||| || || | ||| | || ||||||| | || || | ||| Sbjct 879186 TTGAAAACACGAAGCATGGGGATTAGTCCACTAGAAATACCATTAGATCCCGATACATAA 879245 Query 63317 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63376 ||| | || | || ||| | | | ||| ||||| |||| || ||||| Sbjct 879246 GCCCCATTCGCCCTTATGTTAGAAGCATAAATACCAATTCCACCTGAAGCCTTGGAGATA 879305 Query 63377 AATGC-GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 63435 | || | ||| | || || |||| || || ||| ||| || |||| || Sbjct 879306 AGAGCTGTATC-ATGCAATGTTCGGAAGATTCCATCAATAGAATCCTCTTTCATACCAAC 879364 Query 63436 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63495 |||||||||| ||| | | ||| | ||||| || ||||| || || || || || Sbjct 879365 TAGAAAACAGGAAGAAAGATATTGATTAACTGTTCCTGCGTTAAACAATGTGGGCGATGC 879424 Query 63496 GTGAGTAAACCATTTT 63511 ||| |||| ||||| Sbjct 879425 ATGAATAAAGTATTTT 879440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631588139200