Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq7 197 3e-45 seq6 165 2e-35 >seq7 Length=888749 Score = 197 bits (218), Expect = 3e-45 Identities = 169/209 (81%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || || || || || ||||| || ||||| || ||||| || |||||||| Sbjct 735491 ACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGTGTTCTGCCATCTTCC 735432 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || || || || ||||| ||||||||||||||||| ||||||||||| ||| Sbjct 735431 AGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACCTTCCTTGTCCTGA 735372 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||||| ||||||| ||||||||||| | || || ||||| || ||||| ||||| Sbjct 735371 ATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGATAGTTTTA 735312 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || ||||||||||| || ||||| Sbjct 735311 CCAGTTAGAGTCTTGACGAAAATTTGCAT 735283 Score = 170 bits (188), Expect = 4e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || || || || |||||||| ||||| || || || || ||||| || Sbjct 736175 ACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCCATCCTCA 736116 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||| || || || || |||||||||||||| || ||||| || ||||| || ||| Sbjct 736115 AGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTTATCCTGA 736056 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||||| ||||||| ||||||||||| | || || ||||| || ||||| ||||| Sbjct 736055 ATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGATAGTTTTA 735996 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || ||||||||||| || ||||| Sbjct 735995 CCAGTTAGAGTCTTGACGAAGATTTGCAT 735967 Score = 168 bits (186), Expect = 1e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || || || || || || ||||| ||||| || || || || || || Sbjct 735951 CAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGAGTTCTACCGTC 735892 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| || || || || || || ||||| |||||||| || ||||| ||||||||||| Sbjct 735891 TTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGAATACCTTCCTTGTC 735832 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | ||||||| |||||||| || | ||||| ||||||| ||||| || Sbjct 735831 TTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACTTCCAGAGTGATAGT 735772 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || ||||| ||||| || ||||| Sbjct 735771 CTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 735739 Score = 167 bits (184), Expect = 4e-36 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | || || || ||||||||||| || || || | || || |||||||| Sbjct 849287 ACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGTTCTACCATCTTCC 849346 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || ||||| || | |||||||||||| ||||| || ||||||||||| ||| Sbjct 849347 AATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCCTGA 849406 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||||| ||||||| || |||||||| | ||||| || ||||| |||||||| || Sbjct 849407 ATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGATGGTCTTA 849466 Query 68433 CCCGTGAGGGTCTTGACGAA 68452 || || | |||||||| || Sbjct 849467 CCAGTCAAAGTCTTGACAAA 849486 Score = 158 bits (174), Expect = 2e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || |||||||| || || |||||||| |||||||| ||||| || || || || || ||| Sbjct 736406 AAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTACCGTCT 736347 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || ||||| || || || || | ||| |||||||| || ||||| ||||||||||| Sbjct 736346 TCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCC 736287 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 ||||| || | || || ||||| || || | ||||| |||||||| ||||||||| Sbjct 736286 TGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGTT 736227 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||| || || || || ||||| Sbjct 736226 TTACCAGTCAAGGTTTTCACAAAGATTTGCAT 736195 Score = 156 bits (172), Expect = 8e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || || || || || |||||||| ||||| || | || || ||||| || Sbjct 735719 ACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAGTTCTGCCATCCTCA 735660 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||| || || || || | ||| |||||||| || ||||||||||| ||||| || Sbjct 735659 AGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATGCCTTCTTTGTCCTGG 735600 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | |||||| ||||| || || | ||||| |||||||| |||||||| || Sbjct 735599 ATCTTAGATTTGACGTTGTCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGTCTTA 735540 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || ||||| ||||| |||||||| Sbjct 735539 CCGGTTAGAGTCTTAACGAAAATCTGCAT 735511 >seq6 Length=915354 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | ||||| || ||||||||||| || ||||| | || || |||||||| Sbjct 604746 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCATCTTCC 604805 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || || || || | |||||||||||| ||||| || || |||||||| ||| Sbjct 604806 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCCTGA 604865 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | |||||| || || ||||| | ||||| ||||| | ||| ||||| || Sbjct 604866 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATGGTCTTA 604925 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| | |||||||| || |||||||| Sbjct 604926 CCCGTCAAAGTCTTGACAAAAATCTGCAT 604954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621800945440