Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq7 118 9e-22 seq6 95.1 1e-14 >seq7 Length=888749 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | |||||| | ||| || || | |||||||| || || ||||||||||| Sbjct 735740 ATACCACCTCTTAGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCA 735681 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | ||| |||||||| ||||| || | || | | ||||||||| ||| Sbjct 735680 GATAAAGTTCTGCCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGA 735621 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||||||||| ||||| ||| | | || | || || | ||||| Sbjct 735620 GGAATGCCTTCTTTGTCCTGGATCTTAGATTTGACGTTGTCGATAGTATCAGAAGATTCC 735561 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || ||||| ||||| || || ||||||||||| Sbjct 735560 ACTTCCAAAGTGATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCAT 735511 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || |||||| || || || | |||||||| || |||||||||||||| Sbjct 735968 ATACCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCA 735909 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| | | ||||| | |||||||||||| | || || | ||||||||| || Sbjct 735908 GACAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGG 735849 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| ||||| || | | || | ||| || | ||||| Sbjct 735848 GGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCC 735789 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || ||||| ||||| || || ||||| ||||| Sbjct 735788 ACTTCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 735739 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || |||||| || || || | || ||||| || || ||||||||||| Sbjct 735284 ATACCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCA 735225 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| | | ||||| ||||| || ||||| | || | | |||||| |||||| Sbjct 735224 GACAAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCCGGA 735165 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| |||||| || | | || | ||| || | ||||| Sbjct 735164 GGAATACCTTCGTTGTCTTGGATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCA 735105 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || || || |||| ||| || || ||||||||||| Sbjct 735104 ACCTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 735055 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || | |||||| ||||| || || | ||||| ||||| || ||||||||||| | Sbjct 736421 CCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGAC 736362 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| | | ||||| | ||| ||||| || | || | | ||||||||| |||||| Sbjct 736361 AGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGA 736302 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGAC 114334 || ||||| ||||| ||| ||| | |||| | | || | || || | ||||| || Sbjct 736301 ATACCTTCCTTGTCCTGAAT-TTTAGATTTAACATTATCGATAGTATCAGAAGATTCCAC 736243 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | ||||| || |||| ||||| ||||| || ||||| Sbjct 736242 TTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 736195 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || ||| | ||| | || | |||||||| || || ||||||||||| Sbjct 736196 ATACCACCTCTTAATCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCA 736137 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | ||| |||||||| |||||||| |||| || | |||||||| ||| Sbjct 736136 GACAGGGTTCTGCCATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGA 736077 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || || || ||||||| || | | || | |||||||| || ||| Sbjct 736076 GGAATACCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCG 736017 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||| || || ||||| || || || || ||||| Sbjct 736016 ACTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCAT 735967 >seq6 Length=915354 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| ||||| |||||||| ||| || || | | |||||| | ||| |||||| Sbjct 604758 GTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCATCTTCCAATTGCTTACCA 604817 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| | | |||||||| || || || || || ||||| |||||| || Sbjct 604818 GCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCCTGAATCTTGGACTTG 604877 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||| | ||||| || || | ||| | || || || |||| ||| Sbjct 604878 ACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATGGTCTTACCCGTCAAAGTC 604937 Query 114366 TTTACAAAAATCTGCAT 114382 || |||||||||||||| Sbjct 604938 TTGACAAAAATCTGCAT 604954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134133739824