Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq7 104 2e-17 >seq7 Length=888749 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || |||||||||||||| | | || | ||||||| | || || || Sbjct 735935 GTAGATTCCTTCTGAATGTTGTAATCAGACAGAGTTCTACCGTCTTCTAATTGTTTACCA 735876 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || | ||| ||||| || ||||| ||||| || ||||| || || ||| Sbjct 735875 GCAAAAATTAGTCTCTGTTGGTCTGGGGGAATACCTTCCTTGTCTTGGATCTTGGACTTG 735816 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | |||||| | |||||||| | ||| | ||||| ||||| | ||| Sbjct 735815 ACGTTGTCGATGGTATCAGAAGATTCCACTTCCAGAGTGATAGTCTTACCGGTTAGAGTC 735756 Query 64427 TTTACGAAAATTTGCAT 64443 || |||||||||||||| Sbjct 735755 TTAACGAAAATTTGCAT 735739 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| || || | |||| || ||||| || || ||||||||||| | | || | | Sbjct 735726 TCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAGTTCTGCC 735667 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 || ||||| ||||| || ||| |||| | | ||| ||||| |||||||| |||||||| Sbjct 735666 ATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATGCCTTCTTT 735607 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || || || || || || | |||||| | |||||||| | ||| | Sbjct 735606 GTCCTGGATCTTAGATTTGACGTTGTCGATAGTATCAGAAGATTCCACTTCCAAAGTGAT 735547 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| ||||| | ||| || |||||||| ||||| Sbjct 735546 GGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCAT 735511 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | | || | ||||||| | ||||| || Sbjct 736391 GTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTACCGTCTTCCAATTGCTTACCT 736332 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| | | ||| ||||| |||||||| ||||| || || || ||||| || Sbjct 736331 GCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGAATTTTAGATTTA 736272 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | |||||| | |||||||| | ||| | ||| || || ||||| ||| Sbjct 736271 ACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGTTTTACCAGTCAAGGTT 736212 Query 64427 TTTACGAAAATTTGCAT 64443 || || || |||||||| Sbjct 736211 TTCACAAAGATTTGCAT 736195 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| || || ||||||||||| | | || | ||||||| || ||| Sbjct 735257 TGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGACAAAGTTCTACCGTCTTCCAGTTGC 735198 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || ||| |||| | | ||| || || |||||||| ||||| || ||||| || ||| Sbjct 735197 TTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGAATACCTTCGTTGTCTTGGATCTTT 735138 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| || || | |||||| | || || || | || | ||||| || ||| Sbjct 735137 GACTTAACGTTGTCGATGGTATCAGAAGATTCAACCTCCAAGGTAATAGTCTTACCAGTC 735078 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 ||||| || |||||||| ||||| Sbjct 735077 AAAGTCTTAACGAAAATCTGCAT 735055 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || || |||||||| | | || | | ||||| |||||||| || Sbjct 735479 GTAGATTCCTTCTGGATATTGTAATCAGATAGTGTTCTGCCATCTTCCAGCTGCTTACCA 735420 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || | ||| |||||||| ||||| ||||| || || || || ||| ||| Sbjct 735419 GCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACCTTCCTTGTCCTGAATCTTTGACTTG 735360 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || | || ||||||| ||| | || || || || | ||| Sbjct 735359 ACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGATAGTTTTACCAGTTAGAGTC 735300 Query 64427 TTTACGAAAATTTGCAT 64443 || |||||||||||||| Sbjct 735299 TTGACGAAAATTTGCAT 735283 Score = 82.4 bits (90), Expect = 8e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 ||||| || || || || | || ||||| || || ||||||||||| | | ||| | Sbjct 736184 AATCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTG 736125 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 | || ||||| ||||| || ||| | || || | || ||||| |||||||| || || Sbjct 736124 CCATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCC 736065 Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405 || || || || ||| ||| || || | || || | || ||||||| ||| Sbjct 736064 TTATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTG 736005 Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || || || || | ||| || ||||| |||||||| Sbjct 736004 ATAGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCAT 735967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644475230880