Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq7 95.1 1e-14 >seq7 Length=888749 Score = 95.1 bits (104), Expect = 1e-14 Identities = 143/197 (73%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGA 138479 || ||||| || |||||||| || || || | || | ||||| ||||| ||||| | Sbjct 736160 GATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCCA-TCCTCAAGTTGCTTACCAGC 736102 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA 138539 | ||||||| | |||||||| ||||| ||||| || || || ||| | |||| || | Sbjct 736101 AAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTTATCC-TGAATCTTTGACTTGA 736043 Query 138540 --TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| | | |||||||| ||||| || || | || | ||||||||||| ||||| Sbjct 736042 CGTTGT-CGATGGTGTCGGAAGACTCGACTTCTAAAGTGATAGTTTTACCAGTTAGAGTC 735984 Query 138598 TTTACAAAAATCTGCAT 138614 || || || || ||||| Sbjct 735983 TTGACGAAGATTTGCAT 735967 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||| || || | | ||||| || || |||||||| || || ||| | ||| Sbjct 736406 AAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTACCGTCT 736347 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | ||| ||||| | | | || | | ||||||||| ||||| |||||||| ||||| Sbjct 736346 TCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCC 736287 Query 138523 GTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| |||| | ||||| | || | || || | || ||||| || | || | || Sbjct 736286 -TGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGT 736228 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||||| ||||| ||||| || ||||| Sbjct 736227 TTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 736195 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | ||| || || || | | || ||||| || |||||||| || | Sbjct 735281 CCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAC 735222 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || ||||| || || | | | || | | |||||| |||||||| Sbjct 735221 AAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGA 735162 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| ||| | |||| |||| | | ||| || | || || | Sbjct 735161 ATACCTTCGTTGTCTTGGATCTTT-GACTTAACGTTGT-CGATGGTATCAGAAGATTCAA 735104 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || |||||||||| ||| || || ||||||||||| Sbjct 735103 CCTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 735055 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | ||| || || || | | || ||||| ||||||||||| || | Sbjct 735965 CCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 735906 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || | ||||||||| | | | ||||| | ||||||||| || || Sbjct 735905 AGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGA 735846 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| ||||| ||| || || | | || | ||| || | || ||||| Sbjct 735845 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACT 735786 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| || ||||| || || ||||| ||||| Sbjct 735785 TCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 735739 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/157 (73%), Gaps = 4/157 (3%) Strand=Plus/Minus Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 || || || || ||||| | | | || || | ||||||||| || || |||||||| ||| Sbjct 735437 TCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACCTTCCTTG 735378 Query 138520 TCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCA 138577 || ||| | |||| || | |||| | | |||||||| ||||| || || | || | Sbjct 735377 TCC-TGAATCTTTGACTTGACGTTGT-CGATGGTGTCGGAAGACTCGACTTCTAAAGTGA 735320 Query 138578 GCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||||| ||||| || || ||||| ||||| Sbjct 735319 TAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 735283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262077429440