Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq7 127 2e-24 seq6 107 2e-18 >seq7 Length=888749 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 ||||| || |||||||| |||||||| ||||| | ||| | ||| |||| || Sbjct 735485 TGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGTGTTCTGCCATCTTCCAGCTGC 735426 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | |||| || || ||||| || ||||| ||||| || || ||||| ||| Sbjct 735425 TTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACCTTCCTTGTCCTGAATCTTT 735366 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || | ||||||||||||||||||||| | ||| | ||||| || || Sbjct 735365 GACTTGA-CGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGATAGTTTTACCAGT 735307 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || || ||||||||||| Sbjct 735306 TAGAGTCTTGACGAAAATTTGCAT 735283 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || ||||| || |||||||| ||||| || ||||| | |||| | ||| || Sbjct 736175 ACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCCATCCTCA 736116 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||| || || || | || | || ||| ||||| || ||||| || || ||||| ||| Sbjct 736115 AGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTTATCCTGA 736056 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || ||| |||| || | || | ||||||||||||||||||||| | ||| | ||||| Sbjct 736055 ATCTTTGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGATAGTTTT 735997 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || |||||||| || || || |||||||| Sbjct 735996 ACCAGTTAGAGTCTTGACGAAGATTTGCAT 735967 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | ||||| || |||||||| || || || ||||| | ||| || Sbjct 735953 CTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGAGTTCTACCG 735894 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || |||||||| || || | || | || || ||||| || ||||| ||||| || Sbjct 735893 TCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGAATACCTTCCTTG 735834 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| || || |||| || | || | ||| || ||||| || ||||| ||||| | Sbjct 735833 TCTTGGATCTTGGACTTGA-CGTTGTCGATGGTATCAGAAGATTCCACTTCCAGAGTGAT 735775 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||||||||| || || ||||||||||| Sbjct 735774 AGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 735739 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || |||||||| ||||| || ||||| | ||| | ||| || | ||| Sbjct 735713 TGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAGTTCTGCCATCCTCAAGTTGC 735654 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || ||||| | ||||||| || ||||| || |||||||||||||| || || || || Sbjct 735653 TTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATGCCTTCTTTGTCCTGGATCTTA 735594 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 ||||| || | || | || || ||||| || ||||| | ||| | || || ||||| Sbjct 735593 GATTTGA-CGTTGTCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGTCTTACCGGT 735535 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || || ||||| ||||| Sbjct 735534 TAGAGTCTTAACGAAAATCTGCAT 735511 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 |||| || |||||||||||||| || || || | ||| || ||| |||||||| Sbjct 849293 TGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGTTCTACCATCTTCCAATTGC 849352 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | || |||| ||| ||||| || || || ||||| || || ||||| ||| Sbjct 849353 TTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCCTGAATCTTT 849412 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || | |||||| || || ||||| || | ||| | || || || || Sbjct 849413 GACTTGA-CGTTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGATGGTCTTACCAGT 849471 Query 45317 TAGAGTTTTTACAAAA 45332 | ||| || |||||| Sbjct 849472 CAAAGTCTTGACAAAA 849487 >seq6 Length=915354 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 |||| || |||||||||||||| || || ||| | |||| || ||| |||||||| Sbjct 604752 TGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCATCTTCCAATTGC 604811 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | ||||||| ||| ||||| || || || || || || || ||||| || Sbjct 604812 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCCTGAATCTTG 604871 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 |||| || | ||||| ||||| || ||||| || |||| || || || || Sbjct 604872 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATGGTCTTACCCGTC 604931 Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341 | ||| || |||||||| |||||| Sbjct 604932 AAAGTCTTGACAAAAATCTGCATC 604955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002906197920