Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 1e-15 >seq3 Length=1313108 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 || || |||| || |||||||| ||||| | |||||||| || | | ||||||| | Sbjct 878670 GGCAGTGCGACCGAAGCCAGATTGCACACTGCTGTCTCATCTTTGGAACTATACTCTACA 878729 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || || || ||||| ||| |||||||| ||||| || ||||||||||| || | Sbjct 878730 ATCTCACAGCATAAATTAGAAGATTTAATGGTACCCAAATTTTTTTGATTTGATTTAAAG 878789 Query 116545 TTACACGCATCCTTGTAGAGCATA 116568 ||||| | ||||||||| |||||| Sbjct 878790 TTACATGAATCCTTGTAAAGCATA 878813 Score = 86.0 bits (94), Expect = 8e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 115564 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 115623 || |||||||| || || || ||||| ||||| |||| | |||||| || ||| || Sbjct 877785 TAATACATCCCAGTTTTCAGTCCCTGTTTCCATGCATGAAAATGCATACTGGTCAATTTT 877844 Query 115624 GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 115683 | ||||||||| |||||| || || | |||||| |||||||||||||| || | Sbjct 877845 CCCATTGTTGGACTCCTCATGAAAAGATTTAAACTTTGTGATTGATCGATGAATGGTGCT 877904 Query 115684 CGATCCGCCGCCATATCAAT 115703 | ||| ||||||||||| Sbjct 877905 CTATCACGAGCCATATCAAT 877924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506801220320