Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq7 132 1e-25 seq6 100 7e-16 >seq7 Length=888749 Score = 132 bits (146), Expect = 1e-25 Identities = 154/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | ||| | ||| || |||||||||| ||||||||||| ||| || || || Sbjct 849280 TCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGTTCTACC 849339 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||||| || |||||||| | | || ||||| || || ||||| Sbjct 849340 ATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 849399 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 |||||||||||| ||| ||| || | |||||| | | ||| || ||||| ||||| Sbjct 849400 GTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGAT 849459 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621 |||||||| || | ||| || |||||| Sbjct 849460 GGTCTTACCAGTCAAAGTCTTGACAAAA 849487 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| || || | ||| ||||| || ||||| |||| ||||| |||| | || || Sbjct 735500 AGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGTGTTCTG 735441 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||||||||||||||| || || || || || | ||| ||||| || ||| ||||| Sbjct 735440 CCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACCTTCC 735381 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 |||||||||||| ||| ||| |||| |||||| | | || || || || ||| Sbjct 735380 TTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTG 735321 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| || || |||||||| Sbjct 735320 ATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTG 735286 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || ||||| ||||| || ||||| |||| |||||| |||| || || || || Sbjct 736182 TCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCC 736123 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| || || ||||| || || ||||| || | || ||||| ||| ||| || || Sbjct 736122 ATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTT 736063 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 |||||||||||| ||| ||| |||| |||||| | | || || || || ||||| Sbjct 736062 ATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGAT 736003 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || ||||| || || || ||||| Sbjct 736002 AGTTTTACCAGTTAGAGTCTTGACGAAGATTTG 735970 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| | || | ||| ||||| ||||| || |||| |||||| |||| || ||| || Sbjct 736412 AGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTA 736353 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || ||||||| ||||| || || || || | | ||| ||||| ||| ||| ||||| Sbjct 736352 CCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCC 736293 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 |||||||| || || || |||| || || | | ||| || ||||| ||| Sbjct 736292 TTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTG 736233 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || | ||||||||||| ||||| Sbjct 736232 ATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTG 736198 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || || || || ||||| |||||||| || || ||| || | ||||||||| |||||||| Sbjct 736324 ATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAACATCCAGAAA 736383 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACT 201026 ||||||||||| ||| | ||||| ||||| Sbjct 736384 GAGTCTACTCTGCACTTGGTTTTAAGACT 736412 >seq6 Length=915354 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| ||||| | ||| | || || |||||||||| ||||||||| | ||| || || || Sbjct 604739 TCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 604798 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||||| || || ||||| | | || ||||| || || || || Sbjct 604799 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 604858 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||||||||| ||| || || | ||||| | | ||| || || | || || Sbjct 604859 GTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 604918 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| | ||| || |||||||| || Sbjct 604919 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTG 604951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920814543484