Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq6 205 1e-47 seq9 98.7 1e-15 >seq6 Length=915354 Score = 205 bits (226), Expect = 1e-47 Identities = 1089/1716 (63%), Gaps = 45/1716 (3%) Strand=Plus/Minus Query 111642 GGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGACAAGATGTCCC-GTGG 111700 ||||| ||||| |||||||| | |||| | || || ||| | |||||| | || Sbjct 274269 GGTATTCATGGTGAAGATATCAAATCTGCGATCGAAACTTACAATTTGATGTCATTGAGG 274210 Query 111701 TATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTC 111760 ||| |||||||| || | ||||| || ||||| || ||||| ||| || |||||| | Sbjct 274209 TAT-TTCATCCATGCTTCTCCAACTCTTTTCAATGCAGGTACTCCACATCCACAAATGGC 274151 Query 111761 CAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCAC 111820 |||||||||| | || | || || ||||| || | || ||||| | | | | Sbjct 274150 ATCTTGTTTCCTTGTGGCGATGAAAGACGATTCCATTGAAGGTATTTATGATTCATTAAA 274091 Query 111821 TGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAG 111880 ||||||||| || || ||| ||||||||||| ||| |||| || ||| | | | Sbjct 274090 AGAATGTGCCATGATTTCCAAGACTGCTGGTGGTATTGGGTTGCATATTCATAACATTCG 274031 Query 111881 AGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCT 111940 | | ||| ||| |||||| |||||| || ||||| | || |||||| | Sbjct 274030 TTCTACGGGTTCTTACATTGCAGGTACTAATGGTACTTCCAATGGTTTAATCCCAATGGT 273971 Query 111941 TCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAG------GG 111994 ||| || |||||| ||| || || ||||| | |||| ||| | ||| || Sbjct 273970 TCGTGTTTTTAACAACACTGCACGTTATGTGGATCAAGGTGGCAAT---AAGAGACCTGG 273914 Query 111995 ATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCG 112054 | | |||| | ||| | || ||||||||| | |||||| | || ||| |||| | | Sbjct 273913 AGCATTCGCCCTTTATTTGGAACCATGGCACTCAGATATCTTTGATTTCATTGATATCAG 273854 Query 112055 TCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTC 112113 ||||| ||| | || || | |||| | ||| | ||| | || | ||||||| Sbjct 273853 AAAGAACCATGGTAAAGAAGAAATTC-GTGCAAGAGATTTATTCCCAGCATTATGGATTC 273795 Query 112114 CAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA 112173 | ||| | |||||||| | || || ||| || | ||| | || || | |||| Sbjct 273794 CTGATTTGTTCATGAAACGTGTCGAAAAGAATGAAGAATGGACACTTTTCTCTCCAAGTG 273735 Query 112174 AGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACG 112233 | || || ||| | | |||| ||||| || |||||| | ||| | || | Sbjct 273734 AAGCTCCTGGTTTAGCAGATGTATATGGTGAAGAATTTGAAAAATTGTACGAACGTTATG 273675 Query 112234 AGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCA 112293 | ||||| | || | | ||| | |||| | ||||| | || ||| | Sbjct 273674 AACAAGAAGGCCGTGGTAGAAAGACAATTAGAGCTCAAAAGTTGTGGTATGCCATTTTAG 273615 Query 112294 AGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGA 112353 | | ||||| || ||||||||||| | ||||| || || || || ||||| |||||| Sbjct 273614 AAGCACAAACTGAAACTGGTACACCTTTCATGCTCTATAAGGATGCATGTAATGAAAAGA 273555 Query 112354 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT 112413 |||| |||||||| | |||||||| || |||||| | ||| |||||| |||||| Sbjct 273554 GTAACCAAAAGAACCTTGGTGTGATTAAATCTTCCAATTTATGTTGTGAAATCGTGGAAT 273495 Query 112414 TTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATG 112473 | ||||| ||||| || || || ||||| | || || ||||| | || | || Sbjct 273494 ACTCTGACAAGGATGAAACTGCAGTTTGTAATTTAGCTTCTATCGCATTACCATCTTGTG 273435 Query 112474 TGG----ATC--CAGAGACAAAG--ACATTTG----ATTATGAAAAACTCCACGAAGTTA 112521 ||| ||| |||| ||| ||| | | || || ||| | || ||||| Sbjct 273434 TGGAAGTATCGGCAGATGGTAAGGAACAATGGTACAGTTTTGCCAAATTACATGAAGTCG 273375 Query 112522 CGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGA 112581 | ||| || | ||| || | |||| || |||||| | || | ||||| ||| Sbjct 273374 CTAAAGCTATTACACGTAATTTGAACAAGGTCATTGATCGTAACTACTACCCAGTTCCTG 273315 Query 112582 CTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGG 112641 || | ||| ||||||||||| | || |||| || ||||| | || | || | Sbjct 273314 AAGCCAAGAGATCCAATATGAGACATAGACCTATTGCACTTGGTGTTAATGGGTTAGCAG 273255 Query 112642 ATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGC 112701 | || || | | || | ||||||| || || || || | | || | Sbjct 273254 ACACTTTTATGATGTTGCGTCTGCCATTTGAATCTCCTGAGGCAAAAATATTGAACCAAC 273195 Query 112702 GTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGA-GTTCGGAGTTGGCAGAGGTT 112760 || ||||| || || || |||| || |||| | | || || ||||| || || Sbjct 273194 AAATTTTTGAAACTATTTACCACGGTGC-CTTGGAACAATCTTGTGAATTGGCCAAGATT 273136 Query 112761 GATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGAT 112820 | ||| | ||| |||| ||| ||||| || || ||||| | | ||||||||| Sbjct 273135 CACGGTACTTATTCTACCTATGAAGGTTCCCCTATCTCCCAAGGTCTTTTACAATTTGAT 273076 Query 112821 ATGTGGGAAGGTGAGACC--AAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCA 112878 | |||| || || || || | | | || ||||| | | | || |||| | Sbjct 273075 CTTTGGG-AGAAGAATCCTTCAGAATTA-TGGGATTGGGAACCATTGAGACAAGGCATTA 273018 Query 112879 AGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCAC 112938 | || | ||| | | ||| | || |||| || ||||| || || || || ||| Sbjct 273017 AAGAACATGGTGTAAGAAACTCATTATTAGTGGCCCCTATGCCCACTGCTTCAACATCAC 272958 Query 112939 AAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGA 112997 ||||||||||| | || ||||| || ||||| ||||| | ||||| || ||| | | Sbjct 272957 AAATCTTGGGTTACAACGAATGTTTCGAACCTTACACATCTAACATGTACTCT-CGTCGT 272899 Query 112998 ACCCTCGCGGGAGAGTTTGTGATTGTCAA--CAAGCATCTCGTGGATGACCTCAAAGAGA 113055 | | || || || ||||| || || | | | | | || | ||| Sbjct 272898 GTTTTATCTGGTGAATTCCAAATTGTTAATCCATACTTGT--TAAAGGATTTGGTAGATT 272841 Query 113056 TTGGTCTCTGG--TCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCA 113113 | ||| | ||| | ||| |||||| | | || | | | |||||||||||| Sbjct 272840 TAGGTATTTGGGATGAAAG--TATGAAACAACAAATCATTACTGATAATGGTTCCATTCA 272783 Query 113114 AAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAA--TC 113171 || ||| |||||||| | ||||| || | |||||| || || ||||||| || Sbjct 272782 GAACATTCCAAATATTCCACAAGAAATCAAAGATTTGTACAAGACGGTGTGGGAAATTTC 272723 Query 113172 AAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAA 113231 | || |||| | |||||||| || ||||||| | |||||||||||| ||| Sbjct 272722 TCAAAGA--CATGTTCTAGACATGGCTGCTGATCGTGCTGTGTTCATTGATCAATCTCAT 272665 Query 113232 AGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTAC 113291 ||||| | |||| || || ||| || | | ||||||| | ||| Sbjct 272664 TCCTTGAATATCCACATGCGTGCCCCCACAATGGGTAAATTAACAAGTATGCACTTCTAC 272605 Query 113292 AGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 113327 ||||||||||||||||||| || || ||||| ||| Sbjct 272604 GGTTGGAAGAAGGGTCTCAAGACTGGTATGTACTAC 272569 >seq9 Length=446282 Score = 98.7 bits (108), Expect = 1e-15 Identities = 265/390 (68%), Gaps = 23/390 (6%) Strand=Plus/Plus Query 15975 AAACCATCCATCTCTGTCAAAAGC---TGGTTAATAGTTTGTTCCCGTTCATCATTCGC- 16030 |||||||||||||| || |||| ||||| | ||| | ||| | ||| ||||| || Sbjct 223167 AAACCATCCATCTC---CACAAGCAATTGGTTTAAAGTGTTTTCTCTTTCGTCATTAGCA 223223 Query 16031 --TGGCATACCACCAGCACTGCGTTGCTTTCCC-ACGGCATCAATCTCATCAATGAAGAC 16087 || | | ||| ||| | ||||| || | ||||||||| ||||||| ||||| Sbjct 223224 CCTGAAAAATTACCCTT-CTGTCTAGCTTTACCGATGGCATCAATTTCATCAACGAAGAT 223282 Query 16088 GATGCATGGTTGATTTTCGCGAGC-GACTTCAAAGAGATCCCGTACACGCTTG--GCGCC 16144 ||| |||| ||| || | ||| | ||| ||| || |||| || || |||| || || Sbjct 223283 CATGGATGGCGCATTCTCCCTAGCAGTCTTGAAA-AGGTCCC-TA-ACTCTTGAGGCACC 223339 Query 16145 CACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGAT-GAAGGGGACATTAG 16203 |||||||||||||| |||||||| | | | ||| | || |||||| ||| || Sbjct 223340 AACACCAACAAACATTTCCACAAATTCAGAACCAGAA-ACGAAATAGAAGGGAACACCAG 223398 Query 16204 ATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGA 16263 |||||| ||| | || || | | |||||||| |||||||| ||| | || | Sbjct 223399 CTTCACCAGCAGTTGCCTTAGCCAATAATGTCTTACCAGTACCTGGTGCACCTGATAGAA 223458 Query 16264 GGGCACCTCGTGGAATCTTGGCGCC--ACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAA 16321 ||||| | ||| || || || || |||| | || || ||||| || | ||| Sbjct 223459 TAGCACCCCTTGGGATTTTAGCCCCCATCTTCTCA--TACCTAGAAGGTTCTTTCAAAAA 223516 Query 16322 ATCCACAATCTCTTCCAATTCATCTTTGGC 16351 ||||| ||| || | ||| |||||||| Sbjct 223517 GCTCACAAACTCCTCAATTTCTTCTTTGGC 223546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741996517440