Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq6 197 2e-45 seq4 105 8e-18 seq9 96.9 4e-15 seq7 93.3 5e-14 >seq6 Length=915354 Score = 197 bits (218), Expect = 2e-45 Identities = 848/1318 (64%), Gaps = 42/1318 (3%) Strand=Plus/Plus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | ||||| ||||| || ||||| || | |||||||||||||| || || Sbjct 272909 TACATGTTAGATGTGTAAGGTTCGAAACATTCGTTGTAACCCAAGATTTGTGATGTTGAA 272968 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| || |||| || | ||| | | ||| | ||| || |||| || Sbjct 272969 GCAGTGGGCATAGGGGCCACTAATAATGAGTTTCTTACACCATGTTCTTTAATGCCTTGT 273028 Query 106055 TTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAA 106112 | | ||||| || || || | || ||| || |||| | ||||||||| | Sbjct 273029 CTCAATGGTTCCCAATCCCATAATTCTGAA-GGATTCTTCT-CCCAAAGATCAAATTGTA 273086 Query 106113 GCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCA 106172 | |||||||| | || ||||| ||| | || ||| | ||| || | |||| Sbjct 273087 AAAGACCTTGGGAGATAGGGGAACCTTCATAGGTAGAATAAGTACCGTGAATCTTGGCCA 273146 Query 106173 ATTCACA-GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 106231 ||||||| | | | |||| || |||| || || |||||||| || | |||| Sbjct 273147 ATTCACAAGATTGT-TCCAAGGCACCGTGGTAAATAGTTTCAAAAATTTGTTGGTTCAAT 273205 Query 106232 TCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACC 106290 || || ||| || ||||||| | || ||| || ||||| || || | || Sbjct 273206 ATTTTTGCCTCAGGAGATTCAAATG-GCAGACGCAACATCATAAAAGTGTCTGCTAACCC 273264 Query 106291 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CT-TTCGCG-CAGTCTCAAC 106347 | |||||| | |||||||||| |||| |||||| || || || || ||| ||| Sbjct 273265 ATTAACACCAAGTGCAATAGGTCTATGTCTCATATTGGATCTCTTGGCTTCAGG---AAC 273321 Query 106348 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 106407 || || | || | |||||||| ||| | ||| |||| | || | || ||| Sbjct 273322 TGGGTAGTAGTTACGATCAATGACCTTGTTCAAATTACGTGTAATAGCTTTAGCGACTTC 273381 Query 106408 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCT--CTT--CAT-TGAC-ATACTT------ 106455 ||| | ||| || || || | | | | ||| ||| || | |||||| Sbjct 273382 ATGTAATTTGGCAAAACT----GTACCATTGTTCCTTACCATCTGCCGATACTTCCACAC 273437 Query 106456 ----TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACT 106511 ||| | ||||| || || ||||| ||||| || || |||||||| || | ||| | Sbjct 273438 AAGATGGTAATGCGATAGAAGCTAAATTACAAACTGCAGTTTCATCCTTGTCAGAGTATT 273497 Query 106512 CTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCT 106571 | | ||||| ||| || |||||| |||||| || | |||||||||||||||| Sbjct 273498 CCACGATTTCACAACATAAATTGGAAGATTTAATCACACCAAGGTTCTTTTGGTTACTCT 273557 Query 106572 TTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGA 106631 ||| || || |||||||| ||||||||| | || || || || || || |||| | | Sbjct 273558 TTTCATTACATGCATCCTTATAGAGCATGAAAGGTGTACCAGTTTCAGTTTGTGCTTCTA 273617 Query 106632 GAATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGT--TGGCCCGTCCCTCCGCCTC 106689 ||| || | ||||| | ||| || | || | | | | || || || || Sbjct 273618 AAATGGCATACCACAACTTTTGAGCT-CTA-ATTGTCTTTCTACCACGGCCTTCTTGTTC 273675 Query 106690 GTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 106749 || | ||| | |||||| || ||||| | || | | ||| || || | Sbjct 273676 ATAACGTTCGTACAATTTTTCAAATTCTTCACCATATACATCTGCTAAACCAGGAGCTTC 273735 Query 106750 GTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGG 106809 |||| ||||||| | ||||| || || || || || |||||||| | || || Sbjct 273736 ACTTGGAGAGAAAAGTGTCCATTCTTCATTCTTTTCGACACGTTTCATGAACAAATCAGG 273795 Query 106810 AATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCG 106869 |||||| | | || || | |||||| ||| ||||| | ||| ||||| || Sbjct 273796 AATCCATAATGCTGGGAATAAATCTCTTGCACGAATTTCTTCTTTACCATGGTTCTTTCT 273855 Query 106870 TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC 106929 | |||| ||| || | |||||| | ||||||||| || | ||| | |||| | ||| Sbjct 273856 GATATCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAATAAAGGGCGAATGCTCC 273915 Query 106930 CTTTC---GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 106986 || | ||| |||||| ||||| || || ||| |||||| || |||| ||| Sbjct 273916 AGGTCTCTTATTGCCACCTTGATCCACATAACGTGCAGTGTTGTTAAAAACACGAACCAT 273975 Query 106987 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 107046 ||| || | ||||| || |||||| || || ||| ||| | | | | Sbjct 273976 TGGGATTAAACCATTGGAAGTACCATTAGTACCTGCAATGTAAGAACCCGTAGAACGAAT 274035 Query 107047 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 107106 | ||| || |||| ||||||||| ||||| ||| || || ||||| || | | Sbjct 274036 GTTATGAATATGCAACCCAATACCACCAGCAGTCTTGGAAATCATGGCACATTCTTTTAA 274095 Query 107107 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 107166 | |||| ||||| | || || || || || | || | |||||| ||| | ||| Sbjct 274096 TGAATCATAAATACCTTCAATGGAATCGTCTTTCATCGCCACAAGGAAACAAGATGCCAT 274155 Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 107224 || || ||| ||||| |||||||| || ||||| | || || ||||| |||||| Sbjct 274156 TTGTGGATGTGGAGTACCTGCATTGAAAAGAGTTGGAGAAGCATGGATGAA-ATACCT 274212 >seq4 Length=1229640 Score = 105 bits (116), Expect = 8e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 155044 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 155103 || ||| | ||||||||||| || ||||| || || ||| | ||||||||| ||||| Sbjct 1017267 TACGGTAGAGTTGCACCACGTTCAGGTCTTGCCGTAAAGAACGGTATTCAAACCGGTGCT 1017326 Query 155104 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 155163 |||||||| ||| || || || |||||||| |||||||| || ||||||||| || Sbjct 1017327 GGTGTTATCGATAGAGATTACACTGGTGAAGTTAAAGTCGTCCTGTTCAATCACACTGAT 1017386 Query 155164 AAAGACTTTGA 155174 || |||||||| Sbjct 1017387 AAGGACTTTGA 1017397 >seq9 Length=446282 Score = 96.9 bits (106), Expect = 4e-15 Identities = 259/387 (67%), Gaps = 17/387 (4%) Strand=Plus/Plus Query 9282 AAACCATCCATCTCTGTCAAAAG---TTGGTTAATAGTTTGTTCCCGTTCATCATTCGC- 9337 |||||||||||||| || ||| |||||| | ||| | ||| | ||| ||||| || Sbjct 223167 AAACCATCCATCTC---CACAAGCAATTGGTTTAAAGTGTTTTCTCTTTCGTCATTAGCA 223223 Query 9338 --TGGCATACCACCAGCACTGCGTTGCTTTCCC-ACGGCATCAATCTCATCAATGAAGAC 9394 || | | ||| ||| | ||||| || | ||||||||| ||||||| ||||| Sbjct 223224 CCTGAAAAATTACCCTT-CTGTCTAGCTTTACCGATGGCATCAATTTCATCAACGAAGAT 223282 Query 9395 AATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCAC 9454 || |||| ||| || | || | | || || || | ||| ||| ||| || || Sbjct 223283 CATGGATGGCGCATTCTCCCTAGCAGTCTTGAAAAGGTCCCTAACTCTTGAGGCACCAAC 223342 Query 9455 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGAT-GAAGGGGACATTAGATT 9513 |||||||||||| |||||||| | | | ||| | || |||||| ||| || || Sbjct 223343 ACCAACAAACATTTCCACAAATTCAGAACCAGAA-ACGAAATAGAAGGGAACACCAGCTT 223401 Query 9514 CACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGG 9573 |||| ||| | || || | | |||||||| |||||||| ||| | || | | Sbjct 223402 CACCAGCAGTTGCCTTAGCCAATAATGTCTTACCAGTACCTGGTGCACCTGATAGAATAG 223461 Query 9574 CACCCCGTGGAATCTTGGCGCC--ACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATC 9631 |||||| ||| || || || || |||| | || || ||||| || | ||| Sbjct 223462 CACCCCTTGGGATTTTAGCCCCCATCTTCTCA--TACCTAGAAGGTTCTTTCAAAAAGCT 223519 Query 9632 CACAATCTCTTCCAATTCATCTTTGGC 9658 ||||| ||| || | ||| |||||||| Sbjct 223520 CACAAACTCCTCAATTTCTTCTTTGGC 223546 >seq7 Length=888749 Score = 93.3 bits (102), Expect = 5e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || || | ||| || |||| | |||| | ||| || |||||| ||| || Sbjct 211022 GGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTTAGACC 211081 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 |||||| |||||| ||||||||||||| | || || ||| ||||| ||||||||||| Sbjct 211082 TGGCATCAGACCCTTCTTCTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAAGAAGAT 211141 Query 117393 ACCCTCCAC 117401 ||| || || Sbjct 211142 ACCTTCAAC 211150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980416512480