Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq7 161 2e-34 seq2 150 4e-31 >seq7 Length=888749 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | ||| | ||| ||||| || || || || ||||||||||| | || || Sbjct 735504 TCTTAGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGTGT 735445 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| ||||||||||| || || || |||| |||||||| || ||||| || Sbjct 735444 TCTGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACC 735385 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| ||||| ||| ||||||||| || |||||||| ||| || ||||| | Sbjct 735384 TTCCTTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAA 735325 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || | ||| || ||||| | |||||| Sbjct 735324 AGTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 735283 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||| ||||| || || || ||||| |||||||| | ||||| Sbjct 735960 TCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGAGT 735901 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | || ||||| || || || |||| ||||||||||| ||||| || Sbjct 735900 TCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGAATACC 735841 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| || || ||||||||| || ||||| || ||| ||||||||| || Sbjct 735840 TTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACTTCCAG 735781 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || | ||| || ||||| | |||||| Sbjct 735780 AGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 735739 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | |||||||||||| || || || || |||||||| | | ||| Sbjct 735276 TCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGACAAAGT 735217 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| || ||||| || || || || | || ||||| || |||||||| || Sbjct 735216 TCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGAATACC 735157 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| || ||| ||| ||||| || ||||| || ||| ||| || || | Sbjct 735156 TTCGTTGTCTTGGATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCAACCTCCAA 735097 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || |||||||| || ||||| | ||||| Sbjct 735096 GGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 735055 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | ||| | ||||||||| || || || || || |||||||| | | ||| Sbjct 735732 TCTTAGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAGT 735673 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || || ||||||||||| || || | || |||||||||||||||||||| Sbjct 735672 TCTGCCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATGCC 735613 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||| || || || |||||||| || || || || ||| ||||||||| | Sbjct 735612 TTCTTTGTCCTGGATCTTAGATTTGACGTTGTCGATAGTATCAGAAGATTCCACTTCCAA 735553 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || | ||| || ||||| | ||||| Sbjct 735552 AGTGATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCAT 735511 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | ||| ||||| ||||| || || || || || |||||||| | || || Sbjct 736188 TCTTAATCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGT 736129 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || || |||||||| || ||||| |||| |||||||||||||||||| || Sbjct 736128 TCTGCCATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACC 736069 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || || || ||||| ||| ||||||||| || |||||||| ||| || ||||| | Sbjct 736068 CTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAA 736009 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || | ||| || ||||| | |||||| Sbjct 736008 AGTGATAGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCAT 735967 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| ||||| | ||| ||||| |||||||| || || |||||||| | ||||| Sbjct 736416 TCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGT 736357 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | ||||||||||| || || | || |||||||| |||||||| || Sbjct 736356 TCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACC 736297 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| |||||||| || || || || || || || ||| ||||||||| | Sbjct 736296 TTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAA 736237 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || ||||| ||||| || || | |||||| Sbjct 736236 AGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 736195 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | ||| | ||| | ||| || || ||||| || ||||| || | | || Sbjct 849274 TCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGT 849333 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||||| |||||||| | || ||||||||| || || || || Sbjct 849334 TCTACCATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACC 849393 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| ||||| ||| ||||||||| ||||||||||| || ||| || || | Sbjct 849394 TTCCTTGTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCCAA 849453 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || |||||||| || || || Sbjct 849454 AGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 849486 >seq2 Length=1400432 Score = 150 bits (166), Expect = 4e-31 Identities = 321/473 (68%), Gaps = 6/473 (1%) Strand=Plus/Minus Query 125149 ATGTTGACAAACGAGCACGGTACAGCATCAAACATCAAGTCGAGAGTAAACAGGCTTTCT 125208 ||||| ||| | || | ||||| ||||| |||||||| |||||||||||| | || || Sbjct 491949 ATGTTAACAGATGAATATGGTACTGCATCTAACATCAAATCGAGAGTAAACCGTCTGTCC 491890 Query 125209 GTTCTTGGTGCCATTGTCTCTTGTCAGCAAAAACTCAAACTCTTGACAAAAGTCCCAGAA 125268 ||| | ||||||| || || |||||||| ||||| | || ||||| ||| | Sbjct 491889 GTTTTATCTGCCATTACTTCCACCCAACAAAAACTAAAACTTTACACTAAAGTTCCACCA 491830 Query 125269 AACGGCCTTGTGATTTTCAGTGGCACGGTGATGCTTCCCGAAGGTAAAGAAAAGAAAGTG 125328 || || | || || | | |||| | || | |||||||| ||||||||||| Sbjct 491829 AATGGGTTAGTTATCTACTGTGGTGATATCATCAATGAAGAAGGTAAGGAAAAGAAAGTC 491770 Query 125329 GCATTTGACGTGGAACCTTTTCGCCCAATCAGCCAAAAGGTGTATGCATGCGACAGCGTC 125388 | ||||| | ||||||| | ||||||| | | | ||| || || | | Sbjct 491769 ACCTTTGATATTGAACCTTATAAACCAATCAACACATCCCTATATTTGTGTGATAACAAA 491710 Query 125389 TTCCACACAGAATGCCTCAAAGAGCTCTTGTACGACGACAAAACATACGGTTTTATTATT 125448 ||||| || ||| || || || || | | ||| | | || |||||| || || Sbjct 491709 TTCCATACCGAAGTTCTATCCGAACTGCTGGAAGCCGATGACAAATTCGGTTTCATCGTT 491650 Query 125449 GTGGATGGTTCAGGG-GCTCTGTTCGCGACCCTTTCGGGAAGTACGAGAACCACTCTT-T 125506 ||||||| |||||| | |||| | | ||||| || | || |||||| |||| Sbjct 491649 ATGGATGG-TCAGGGATCATTGTTTGGTTCGCTTTCCGGTAACACTAGAACCGTTCTTCA 491591 Query 125507 TGTCTTTTCAG-GTATCCCTTCCAAAGAAACACGGCAGGGGAGGACAATCTGCTTTGCGT 125565 ||||||| | || || |||||||||||||| || || || |||||||| ||||| Sbjct 491590 CAAATTTTCAGTGGAT--CTACCAAAGAAACACGGTAGAGGTGGTCAATCTGCCATGCGT 491533 Query 125566 TTTGAGAGACTTCGAAAAGAAAAGAGACACAACTATTTGAGGAAAGTCGCAGA 125618 |||| | || || | ||||| |||||||||||| |||| || || ||||| Sbjct 491532 TTTGCACGTCTAAGAGAGGAAAAAAGACACAACTATGTGAGAAAGGTGGCAGA 491480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480860807884