Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2 201 9e-46 seq1 141 7e-28 seq6 136 3e-26 seq7 120 2e-21 >seq2 Length=1400432 Score = 201 bits (222), Expect = 9e-46 Identities = 409/602 (68%), Gaps = 18/602 (3%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | ||||| ||||| || ||||| || ||||| | || ||||||| Sbjct 73179 AGCTGTTGGTATTGATTTGGGTACCACTTACTCATGTGTGGCACATTTCCAAAATGACCG 73238 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || ||||||||||| || |||||||||||||||||||| ||||||| ||| | ||||| Sbjct 73239 TGTGGAAATTATTGCTAACGATCAAGGTAACAGAACTACCCCATCTTTCGTTGCCTTCAC 73298 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || |||||| || | |||||||| || || | ||||| || || || | ||| Sbjct 73299 CGACACTGAAAGATTGATCGGTGATGCCGCTAAGAACCAAGCTGCTATGAACCCAAGCAA 73358 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || |||| |||||||| ||||| ||||| |||| || |||| | ||||| | Sbjct 73359 CACCGTTTTCGATGCTAAGCGTTTGATTGGTAGAAACTTCGCTGATCCTGAAGTTCAAGG 73418 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 ||||||||||| | || ||| | || ||| | ||| || || || | || ||| Sbjct 73419 TGATATGAAGCACTTCCCATTCAAGATCGTTGACGTTGACGGTAAGCCACAAATCCAAGT 73478 Query 550291 TACTCATGAAGGATCTGTTAAAC-----AATTTTCACCAGAACAAATTTCATCTATGGTT 550345 | || | || || |||| | || | |||||||||||||| ||||||||| Sbjct 73479 T--GAATACAAGA---GTGAAACCAAGAACTTCACTCCAGAACAAATTTCTTCTATGGTT 73533 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAG-TTACGGATGCAGT 550404 || || ||||| | || ||| | || |||| | ||| | | || || || Sbjct 73534 TTGGGAAAGATGAAGGACACCGCC-GAAGGTTACTTGGGCTCTAAGATCAGCGACGCTGT 73592 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | || || ||||| || || || ||||| ||| | |||||||| || |||||||| Sbjct 73593 TGTTACCGTCCCAGCTTACTTCAACGACTCTCAAAGACAAGCTACCAAGGATGCTGGTAC 73652 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 |||||||| | || ||||| ||||| ||||| || || |||||||| || | || || Sbjct 73653 CATTGCTGGTTTGAACGTTCTACGTATCATCAACGAGCCAACTGCTGCCGCTATCGCTTA 73712 Query 550525 TGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATT---GTGGAGG 550581 || || || | | | | ||||||| || || | ||||| |||| |||| || Sbjct 73713 CGGTCTAGACA---AGAGAGGTCAAGAAGAAAACGTCTTGATCTTCGATTTGGGTGGTGG 73769 Query 550582 TA 550583 || Sbjct 73770 TA 73771 Score = 196 bits (216), Expect = 4e-44 Identities = 461/690 (67%), Gaps = 32/690 (5%) Strand=Plus/Plus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 |||||||| |||||||| || ||||| | || |||| |||||||| || ||||| Sbjct 302975 AGAACTGCAGCTGAAAGAGCTAAGAGAGCTTTGTCTTCTGCAACTCAAACTTCTGTTGAA 303034 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 | || || || | ||| || || || | | || || | | || || | ||||||| Sbjct 303035 ATCGACTCCTTGTATGAAGGTATCGACTTCTACACTTCTGTGACCAGAGCTAGATTTGAA 303094 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089 || | ||| | || | || ||| || || |||||||| ||| | ||||| | ||| Sbjct 303095 GAATTGTGTGCCGACATGTTCAGATCTACTATGGAACCAGTCGAAAAGGTTTTGAAGGAT 303154 Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149 | ||| |||| || || |||| || ||||| || ||||||||||| ||||| |||||| Sbjct 303155 GCCAAGGTTGACAAGTCTCAAGTCCACGAAATCGTTCTTGTTGGTGGTTCTACCAGAATT 303214 Query 552150 CCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAAT---GGTAAAAAATTAAATGAAAGT 552206 || | ||||| ||| || | ||| ||| | ||||| || || | |||| Sbjct 303215 CCAAGAATTC---AAAAATTGATCTCTGGATTCTTTTCCGGTAAGGAACCAA--GCAAGT 303269 Query 552207 --GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 | || || ||||| ||||| || || ||||| || | ||||| || || | ||| Sbjct 303270 CCATCAACCCGGATGAAGCTGTGGCTTACGGTGCTGCTGTCCAAGCTGCCATCTTGACTG 303329 Query 552265 GACAAACTGATGAA------AAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTAT 552318 | ||||||| || |||| || | | || | |||||| | || | | Sbjct 303330 G------TGATGAATCTTCTAAGACACAAGATTTGTTGCTGTTGGATGTTGCACCATTGT 303383 Query 552319 CTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTA 552378 | | ||| | || || | ||| ||||| |||||||| | || ||||| |||||| Sbjct 303384 CGTTGGGTATTGAGACCGCTGGTGGTATCATGACTAAGTTGATTCCAAGAAACTCTACTA 303443 Query 552379 TTCCTTGTAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACA 552437 |||| || ||||| || ||| || || ||||| ||||| ||| | | ||| Sbjct 303444 TTCCAACAAAGAAATC-CGAAACTTTCTCCACATATTCTGATAACCAACCGGGTGTGTTG 303502 Query 552438 ATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT----GGTAC 552493 ||||| ||| |||||| ||||||| || || || || |||||| |||| Sbjct 303503 ATTCAGGTTTATGAAGGTGAAAGAACCAAGACAAAGGACAA----CAACTTGTTGGGTAA 303558 Query 552494 TTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTT 552553 || | || ||||| || |||||||| | || || || ||||| ||||| || || Sbjct 303559 GTTCGAGTTGACTGGTATCCCACCTGCTCCAAGAGGTGTTCCACAAATCGAAGTCACCTT 303618 Query 552554 CGATATCGATGCCAATGGAATTTTGAATGT 552583 |||| | ||||||||||| || |||||||| Sbjct 303619 CGATGTGGATGCCAATGGTATCTTGAATGT 303648 Score = 170 bits (188), Expect = 2e-36 Identities = 367/541 (68%), Gaps = 22/541 (4%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||||| || || ||||| ||||||| | ||||| | || || Sbjct 302207 GGTATTGATTTGGGTACAACATACTCCTGTGTTGCACACTTCCAAAACGACCGTGTAGAG 302266 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || ||||||||||||||||||||||||||||| ||||||||||| | ||||| || | | Sbjct 302267 ATCATTGCCAATGATCAAGGTAACAGAACTACCCCATCTTATGTGGCATTCACCGACAGT 302326 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 ||| || | |||||||| || || | |||||| || ||||| | || || || Sbjct 302327 GAAAGATTGATCGGTGATGCTGCTAAGAACCAAGCCGCTATCAATCCAAGAAACACCGTT 302386 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237 || |||||||| ||| |||| || |||| ||| | ||| | || | ||| Sbjct 302387 TTCGATGCTAAGCGTCTAATCGGTAGAAAGTTTGAAGATCCAGAAGTGGTGAATGATGCT 302446 Query 550238 AAGCATTGGCCTTTCCAA---ATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACT 550294 ||||||| || || ||| |||| || | || || || | | | ||| | Sbjct 302447 AAGCATTTCCCATTTCAAGTGATTGACAAGG---ACGGTAAGCCACACA-TCAAGGTTGA 302502 Query 550295 CATGAAGGATCTGTTAAACAA---TTTTCA--CCAGAACAAATTTCATCTATGGTTTTAA 550349 |||| || || || | |||| |||||| ||||||| || |||||||| Sbjct 302503 ATACAAGG----GTGAAGAAAAGGTCTTCACTCCAGAAGAAATTTCTTCCATGGTTTTGG 302558 Query 550350 TGAAAATGAAACAAACAGCC-AGTGCT--TTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406 || ||||| |||| ||| || || || | |||| ||| | | |||||| || Sbjct 302559 GTAAGATGAAGGAAACCGCCGAGAACTACTTGGGTGGT---GAAATCAAGGATGCTGTCG 302615 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | || || |||||||| || || ||||| ||| | ||||||||||| |||||||| || Sbjct 302616 TTACCGTTCCAGCATACTTCAACGACTCCCAAAGACAAGCTACTAAGGATGCTGGTGTTA 302675 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 | ||||| | || ||| | ||||| ||||| ||||| ||||| || || | || |||| Sbjct 302676 TCGCTGGTATGAACGTTTTGCGTATCATCAACGAACCAACTGCAGCAGCTATCGCTTATG 302735 Query 550527 G 550527 | Sbjct 302736 G 302736 Score = 158 bits (174), Expect = 1e-32 Identities = 457/694 (66%), Gaps = 22/694 (3%) Strand=Plus/Plus Query 551908 TAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTG 551967 ||||||||||||| |||||||| || || || | || ||| |||||||| | ||| Sbjct 73949 TAAGAACTGCTTGTGAAAGAGCAAAGAGAACTTTGTCTTCTTCCGCTCAAACCTCCGTTG 74008 Query 551968 AAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTG 552027 || | || || || || || || || || | | || || | | || || | ||| | Sbjct 74009 AAATCGACTCCTTGTTCGAAGGTATCGACTTCTACACTTCTCTAACCAGAGCTAGATTCG 74068 Query 552028 AAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAG 552087 |||| | ||| ||| | || ||| || | || ||||| ||| | || || |||| Sbjct 74069 AAGAATTGTGTGGTGACTTGTTCAGATCTACTCTAGACCCAGTGGAAAAGGTCTTGAGAG 74128 Query 552088 ATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAA 552147 | | ||| | || || || || || ||||| || || || ||||| ||||| |||| Sbjct 74129 ACGCTAAGTTGGACAAGTCTGCTGTCCACGAAATCGTTCTAGTCGGTGGTTCTACCAGAA 74188 Query 552148 TTCCTAAAATTCGCGAAATGTTAAGTTC---TTATTTCAATGGTAAAAAATTAAATGAAA 552204 |||| || || | ||| | | ||| || ||||| ||||| || ||| | Sbjct 74189 TTCCAAAGAT---CCAAAAGCTTGTTTCCGATTTCTTCAACGGTAAGCAACCAAACAAGT 74245 Query 552205 GTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 | | || |||||||| || ||||| || ||||| || | ||||| || ||| | ||| Sbjct 74246 CTATCAACCCAGATGAAGCCGTTGCTTACGGTGCTGCCGTACAAGCTGCCATTTTGACTG 74305 Query 552265 --GACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCT 552322 ||| || | | || ||| ||| | | | || | |||||| | || | || | Sbjct 74306 GTGACGAA-TCTTCCAAGACT-CAAGACTTGTTGCTATTGGATGTTGCCCCATTGTCCTT 74363 Query 552323 TGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC 552382 ||| | ||||| | ||| ||| | ||||| || | ||| ||||| |||||||||| Sbjct 74364 GGGTATTGAAACCGCTGGTGGTGTCATGACCAAATTGATCACCAGAAACTCTACTATTCC 74423 Query 552383 TTGTAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACAATTC 552441 || || || || ||| || || || || || || ||| | | ||| |||| Sbjct 74424 AACCAAGAAGTC-CGAAACTTTCTCCACTTACTCTGACAACCAACCAGGTGTCTTGATTC 74482 Query 552442 AAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGT-----ACTTT 552496 || | || ||||| |||||| | || || || || ||||||| | | || Sbjct 74483 AAGTGTTCGAAGGTGAAAGAGCAAGAACAAAGGACAA----CAACTTGTTGGGTAAGTTC 74538 Query 552497 TAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGA 552556 |||| || ||||| || ||||| || | || || || ||||| |||||||||||||| Sbjct 74539 GAATTGAG-TGGTATCCCACCTGCACCAAGAGGTGTTCCACAAATCGAAGTTACTTTCGA 74597 Query 552557 TATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 | |||| | || || || ||||| || ||||| Sbjct 74598 TGTCGACTCTAACGGTATCTTGAACGTTTCTGCT 74631 Score = 134 bits (148), Expect = 1e-25 Identities = 394/600 (66%), Gaps = 14/600 (2%) Strand=Plus/Plus Query 368557 TTTGATAATTGGCTCCAAAATTCAGTTGATTGGTGTATTTCAAGAAGTAGGTTTTGGGGA 368616 |||| ||||||| || || | ||||||| ||||| |||| ||| | ||||| Sbjct 305853 TTTGCTAATTGGATCGCTAACGCTCGTGATTGGAACATTTCTAGAAATAGATACTGGGGT 305912 Query 368617 ACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAAATTGTTTGTATAGGTTCAATT 368676 |||||||||||| ||||| || || ||| |||||||||||| | ||||| | Sbjct 305913 ACTCCAATTCCATTATGGGTTTCAGACGATTACTCTGAAATTGTTTGTGTCGGTTCTGTG 305972 Query 368677 AAAGAATTGCAAGAATTATCTGGTGTGCAAAATATTAGTGATTTACATATTGATAAAATT 368736 |||||||| ||||||| |||||| || ||||| ||||| || ||| | || Sbjct 305973 CAAGAATTGGAAGAATTGAGTGGTGTTAAAGGTATTAAGGATTTGCACCGTGACCACATC 306032 Query 368737 GATCACATTAAAATTCCATCAAAGAAAGGAAAAGGTTTATTGTCTCGAGTTGAAGGAGTT 368796 || | || | ||||| ||| | || || || ||| | || | || | ||| Sbjct 306033 GACAAGATCACTATTCCTTCACAAAAGGGTAATGGTACTCTAAGAAGAATCGAGGAAGTC 306092 Query 368797 TTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCCATTTGAT 368856 || || || ||||||||||| |||||||||||||| | ||| |||| || |||||||| Sbjct 306093 TTCGACTGTTGGTTTGAATCTGGTTCTATGCCTTACGCCCAATTACACTACCCATTTGAA 306152 Query 368857 AACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACAGAATCAATT 368916 ||| | | | ||| | ||| ||| | | || | || | | ||| | Sbjct 306153 AACACTGAGGA-TTTCA----AATACAGAGT-TCCTGCAAACTTCATTTCTGAAGGTTTG 306206 Query 368917 GATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTA--TCCACAGCTATTTTCGATA 368974 |||||||| | |||||||| ||||| || | || || | || ||||| | | Sbjct 306207 GATCAAACCAGAGGTTGGTTCTATACACTTTCCGTGCTAGGTGTTCAATTATTT--GGTG 306264 Query 368975 AACCGGCTTTTAAAAATGTAATAGTAACTGGTAT--TGTTAATGCATCTGATGGTCAAAA 369032 | ||| || ||||| || || ||||||| | ||| || | |||||| ||| Sbjct 306265 AGGTTCCTTACAAGAATGTTATTGTTTCTGGTATCATCTTA--GCCGCCGATGGTAGAAA 306322 Query 369033 GATGTCAAAAAGTAAGGGTAATTATTCCGATCCTAATATTTTAATTGATAAATTTGGTGC 369092 ||||| ||| | | || ||| | |||||||| ||| | | || || | |||||| Sbjct 306323 AATGTCCAAATCTTTGAAGAACTATCCTGATCCTAACATTGTTTTGGACAAGTATGGTGC 306382 Query 369093 TGATACTTTGAGATTATACCTATTGTCATCACCTGTAGTAAAAGCAGAATCTATTAAATT 369152 ||| | || ||||||||| | | || ||||| | || || ||| || | ||||| Sbjct 306383 AGATGCATTAAGATTATACTTGATTAATTCTCCTGTTTTGAAGGCTGAAACTTTGAAATT 306442 >seq1 Length=1544349 Score = 141 bits (156), Expect = 7e-28 Identities = 505/785 (64%), Gaps = 30/785 (4%) Strand=Plus/Minus Query 551922 GAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTA 551981 |||| || ||||| || ||||||||| | ||| ||| ||| | ||||| || Sbjct 1334670 GAAAAGGCTAAACGTGCCCTTTCATCTCAAATGTCCACCCGTATCGAAATCGATTCTTTT 1334611 Query 551982 TTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCT 552041 | || || || |||| | | || | | || ||||| |||||||| ||| || Sbjct 1334610 GTCGATGGTATCGATTTGAGTGAAACTTTGACCAGAGCCAAGTTTGAAGAG--TTGAACT 1334553 Query 552042 --GATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTG 552099 ||||| || | || || | ||||||| ||| | || || |||| || | ||| Sbjct 1334552 TGGATCTTTTCAAGAAGACTTTGAAACCAGTGGAAAAGGTCTTGGAAGATGCAG-GTTTG 1334494 Query 552100 ATAAATCCAAAGTACAT----GAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAA 552155 | || ||| |||| || ||||| ||||||||||| || || |||||||| || Sbjct 1334493 ACTAAG---AAGGACATCGATGACATTGTTCTTGTTGGTGGTTCCACCAGAATTCCAAAG 1334437 Query 552156 ATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGT--TAATC 552213 | | || || |||| ||||| ||||| || | | ||| || ||| | Sbjct 1334436 GTGCAATCCTTGCTAGAATCTTTCTTCAACGGTAAGAAG--ACTTCCAAGGGTATTAACC 1334379 Query 552214 CAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTG 552273 ||||||| |||||||||| ||||| || ||||||| | | | |||||||| || Sbjct 1334378 CAGATGAAGCTGTTGCCTTCGGTGCTGCGGTTCAAGCTGGTGTCCTTTCTGG------TG 1334325 Query 552274 ATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAA 552333 | ||| | || | ||||| | ||||||| | | ||| || | ||| | |||| Sbjct 1334324 AAGAAGGTGTCGAAGACATTGTTTTGTTAGATGTCAACGCGCTAACTTTGGGTATCGAAA 1334265 Query 552334 CAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAAT 552393 | || ||| | |||||| | ||| | ||||| ||| ||||||| || |||| Sbjct 1334264 CCAGCGGCGGTGTCATGACTCCATTGATCAAGAGAAACACTGCTATTCCAACCAAGAAAT 1334205 Query 552394 CTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAG 552453 ||| | || ||||| | || || ||| | | || | |||||| | | ||||| Sbjct 1334204 CTCAAATCTTCTCTACCGCTGTGGACAACCAACCAACCGTCATGATTCAAGTCTATGAAG 1334145 Query 552454 GAGAAAGAAAATTCACTAAAGATAATAATCAACTTG----GTACTTTTAATTTAGAAGGT 552509 | |||||| | |||| || || ||||||| ||| || | || ||| Sbjct 1334144 GTGAAAGAGCTATGGCTAAGGACAA----CAACTTGTTGGGTAAGTTCGAACTAACTGGT 1334089 Query 552510 ATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAAT 552569 ||||| || || || | || | || ||||||||||| ||||||| | | ||||| ||| Sbjct 1334088 ATTCCACCAGCACCAAGAGGTATTCCACAAATTGAAGTCACTTTCGCTCTAGATGCTAAT 1334029 Query 552570 GGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAACAAGAGTAAAAATATTACTNNN 552629 || ||| | || || ||||| |||||| || |||| | ||| ||||| Sbjct 1334028 GGTATTCTAAAGGTCACTGCCACTGATAAGGGTACTGGTAAGATTGAAACCATTACCATC 1333969 Query 552630 NNNNATAATCGTGGTAGATTTACTGATGAACAAATTAAACGTATGGTCGAAGAAGCTAAA 552689 | || |||||||| || |||| |||| || | ||||| ||||| ||| || Sbjct 1333968 ACTAACGATAAGGGTAGATTGACACCTGAAGAAATCGAAAGGATGGTGGAAGATGCTGAA 1333909 Query 552690 GAATT 552694 |||| Sbjct 1333908 AAATT 1333904 >seq6 Length=915354 Score = 136 bits (150), Expect = 3e-26 Identities = 322/482 (67%), Gaps = 12/482 (2%) Strand=Plus/Plus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || |||||||||||||| || |||||||||||| ||||||||||| ||| ||||||| Sbjct 118169 GTGGAAATTATTGCCAACGAGCAAGGTAACAGAGTTACTCCATCTTTCGTTGCTTTCACT 118228 Query 550112 GAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 | || | ||| | | |||||||| || || | ||||| || || || || Sbjct 118229 CCAGAAGAGAGATTGA-TCGGTGATGCTGCCAAGAACCAAGCTGCTTTGAACCCAGAGAA 118287 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || |||| |||||||| ||||| || || ||||| || | || | ||||||| Sbjct 118288 CACCGTTTTCGATGCTAAGCGTTTGATCGGTAGAAGATTCGACGACGAGTCTGTTCAAAA 118347 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 || | ||| |||||||||| | || | | || || || || | |||| Sbjct 118348 GGACAGAAAGACTTGGCCTTTCAAGCTTATCGACGTCGAAGGTAACCCAGTCGTCGAAGT 118407 Query 550291 TACTCATGAAGGATCTGTTAAACAA-----TTTTCACCAGAACAAATTTCATCTATGGTT 550345 | || | | || |||| | || || || || ||||||| |||||||| Sbjct 118408 T---CAATACT--TGGGTGAAACCAAGACTTTCTCTCCTCAAGAAATTTCCTCTATGGTC 118462 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405 || | || ||||| ||| || ||| |||| ||| | ||| | || || Sbjct 118463 TTGACCAAGATGAAGGAAATTGCTGAAGCTAAGATTGGCCAAAAGGTTGAAAAGGCTGTT 118522 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 || ||||| ||||| || || || ||| | ||| | |||||||| || || ||||| | Sbjct 118523 ATCACTGTTCCAGCTTACTTCAACGACGCTCAAAGACAAGCTACCAAGGACGCTGGTTCT 118582 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 || |||| | || ||||| ||||| ||||| ||||||||||| ||||| |||| || Sbjct 118583 ATCTCTGGTTTGAACGTTCTACGTATCATCAACGAACCTACTGCCGCTGCTATTGCTTAC 118642 Query 550526 GG 550527 || Sbjct 118643 GG 118644 Score = 109 bits (120), Expect = 4e-18 Identities = 245/364 (67%), Gaps = 8/364 (2%) Strand=Plus/Plus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 ||||||||||| |||||||| || || || | || |||| ||||||||| || || ||| Sbjct 118886 AGAACTGCTTGTGAAAGAGCAAAGAGAACTTTGTCCTCTGTTACTCAAACTACCATCGAA 118945 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 || || || | | | || |||| | || |||| | || || | ||| ||| Sbjct 118946 GTCGACTCCCTTTACAACGGTGACGATTTCGAAACCTCTATCACCAGAGCTAGATTCGAA 119005 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATT--GAACCAGTAGAACAAGTTTTAAGAG 552087 | ||||| || ||||| | || || || ||||| || ||||||||| ||| | Sbjct 119006 G--ATTTGAACTCTTCTCTATTCAAGTCCACTTTGGAACCTGTTGAACAAGTTCTAAAGG 119063 Query 552088 ATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAA 552147 || | ||| || || | || | | ||| |||| ||||| ||||| || || |||| Sbjct 119064 ATGCTAAGGTTCCAAAGACTGAAATCGACGAAGTTGTCCTTGTCGGTGGTTCCACCAGAA 119123 Query 552148 TTCCTAAAATTCGCGAAATGTTAAGTTC--TTATTTCAATGGTAAAAAATTAAATGAAAG 552205 |||| || ||| | ||||| || | || ||| | ||||| |||| | || Sbjct 119124 TTCCAAAGGTTCAAAAGATGTT--GTCCGATTTCTTCGAAGGTAAGCAATTGGAAAAATC 119181 Query 552206 TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG 552265 | || |||||||| ||||||||||| ||||| || | |||| ||||| | |||| Sbjct 119182 CATCAACCCAGATGAAGCTGTTGCCTACGGTGCTGCTGTCCAAGGTGCTATCTTGACTGG 119241 Query 552266 ACAA 552269 ||| Sbjct 119242 TCAA 119245 >seq7 Length=888749 Score = 120 bits (132), Expect = 2e-21 Identities = 155/210 (74%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| || || ||| ||| || ||| |||||||||| |||||||| ||||| | Sbjct 735945 CAAG-TGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGAGTTCTACCGTCTTCTA 735887 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 |||||| || |||||||| ||||| || || || || ||||| ||||| || ||||| | Sbjct 735886 ATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGAATACCTTCCTTGTCTTGGA 735827 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTA 563445 | || || || || || ||||||| || | || ||| ||||| | ||| ||| Sbjct 735826 TCTTGGACTTGACGTTGTCGATGGTATCAGAA-GATTCCACTTCCAGAGTGATAGTCTTA 735768 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || ||||| |||||||||||||||||| Sbjct 735767 CCGGTTAGAGTCTTAACGAAAATTTGCATA 735738 Score = 116 bits (128), Expect = 3e-20 Identities = 154/210 (73%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| ||||| ||| ||| || || |||||||||| || |||||| ||| |||| Sbjct 735717 CAAG-TGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAGTTCTGCCATCCTCAA 735659 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 |||| || || |||||||| | ||| || || || |||||||| |||||||| || || | Sbjct 735658 GTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATGCCTTCTTTGTCCTGGA 735599 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTA 563445 | || ||| || || || ||||||| || | || ||| | ||| | || ||| Sbjct 735598 TCTTAGATTTGACGTTGTCGATAGTATCAGAA-GATTCCACTTCCAAAGTGATGGTCTTA 735540 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || ||||| ||||||||||| |||||| Sbjct 735539 CCGGTTAGAGTCTTAACGAAAATCTGCATA 735510 Score = 113 bits (124), Expect = 4e-19 Identities = 138/185 (75%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||||| | |||||| ||||| ||||| ||||| |||||||| | ||| Sbjct 735236 ATGTTGTAATCAGACAAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTC 735177 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || ||||| |||||||| ||||| || ||||| || ||| || || || || ||| Sbjct 735176 TGTTGATCCGGAGGAATACCTTCGTTGTCTTGGATCTTTGACTTAACGTTGTCGATGGTA 735117 Query 563413 TCAGTGTGAGT--ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 |||| || | || | | || |||| ||| |||||||| | ||| ||||||||||| | Sbjct 735116 TCAGAA-GATTCAACCTCCAAG-GTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCT 735059 Query 563471 GCATA 563475 ||||| Sbjct 735058 GCATA 735054 Score = 113 bits (124), Expect = 4e-19 Identities = 137/184 (74%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 ||||||||||||| ||| ||||| |||||| || || || || |||||||| ||||| Sbjct 735464 ATATTGTAATCAGATAGTGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTC 735405 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || || || || ||||| ||||| || || ||||| ||| || || || || || Sbjct 735404 TGTTGGTCGGGTGGAATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTG 735345 Query 563413 TCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 || | || | | ||| | ||| | |||||||||||| ||||| || ||||||||||| Sbjct 735344 TC-GGAAGACTCGACTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTG 735286 Query 563472 CATA 563475 |||| Sbjct 735285 CATA 735282 Score = 109 bits (120), Expect = 4e-18 Identities = 136/184 (74%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||||| || ||||| ||| |||||||| || || ||||| || |||||| Sbjct 736148 ATGTTGTAATCAGACAGGGTTCTGCCATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTT 736089 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || || || |||||||| || || ||||| ||||| ||| || || || || || Sbjct 736088 TGTTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTG 736029 Query 563413 TCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 || | || | | ||| | ||| | |||||||||||| ||||| || ||||| ||||| Sbjct 736028 TCGGAA-GACTCGACTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAGATTTG 735970 Query 563472 CATA 563475 |||| Sbjct 735969 CATA 735966 Score = 109 bits (120), Expect = 4e-18 Identities = 136/184 (74%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||||| |||||||| ||||| | ||| || || |||||||| | ||| Sbjct 736376 ATGTTGTAATCAGACAGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTC 736317 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || || ||||||||||| ||||| || || |||||||| ||| || || || ||| Sbjct 736316 TGTTGGTCAGGAGGAATACCTTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTA 736257 Query 563413 TCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| || | || ||| | ||| | ||||||||||| | ||||| || || ||||| Sbjct 736256 TCAG-AAGATTCCACTTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTG 736198 Query 563472 CATA 563475 |||| Sbjct 736197 CATA 736194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029293250005480