Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq7 131 1e-25 seq6 96.9 3e-15 >seq7 Length=888749 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||| | || ||||| || || || |||||| || || ||||||||||| Sbjct 736421 CCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGAC 736362 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| | |||| ||||| |||||||| ||||| |||| || |||||| || | ||| Sbjct 736361 AGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGA 736302 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||| || ||| ||| | | | || || || | ||||| Sbjct 736301 ATACCTTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACT 736242 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || ||||| || ||||| ||||| ||||| || ||||| Sbjct 736241 TCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 736195 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| | ||| ||||| || || ||| || || || || ||||||||||| Sbjct 735281 CCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAC 735222 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | |||| |||| ||||| || ||||| |||| || ||||||||||| ||| Sbjct 735221 AAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGA 735162 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || ||||| |||||| || || | | | || || | || ||| Sbjct 735161 ATACCTTCGTTGTCTTGGATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCAACC 735102 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| || || || |||||||| || || ||||||||||| Sbjct 735101 TCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 735055 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||| | | ||||| || || || || || || ||||||||||||||| Sbjct 735509 CCACCTCTTAGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGAT 735450 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || ||| | || |||| ||||||||| ||||| ||||||| |||||| || | ||| Sbjct 735449 AGTGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGA 735390 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||||||| || || | | | || || | ||| || Sbjct 735389 ATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACT 735330 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || ||||| || || | ||| || || ||||| ||||| Sbjct 735329 TCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 735283 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| | ||| ||||| || || || || || ||||| ||||||||||| Sbjct 735965 CCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 735906 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| | |||| || || || ||||| ||||| || |||| |||||| || | |||| Sbjct 735905 AGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGA 735846 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||||| || || | | | || || | ||||| Sbjct 735845 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACT 735786 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || || || || | ||| || || ||||| ||||| Sbjct 735785 TCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 735739 >seq6 Length=915354 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || | ||| || ||||| || ||||| || || | ||| | | || ||| Sbjct 604746 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCATCTTCC 604805 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 || |||||||| ||||| |||| || ||||| || | || | ||||||||||| | Sbjct 604806 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCCTGA 604865 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | || || || | || || || | ||||| || || Sbjct 604866 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATGGTCTTA 604925 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 ||||||||||| || ||||||||||||||| || Sbjct 604926 CCCGTCAAAGTCTTGACAAAAATCTGCATCTTG 604958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937358580796