Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08]
52 sequences; 10,081,862 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq6 154 7e-33
seq3 120 2e-22
>seq6
Length=915354
Score = 154 bits (170), Expect = 7e-33
Identities = 286/420 (68%), Gaps = 0/420 (0%)
Strand=Plus/Plus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
||| || ||||| |||||||| | ||| ||||||||||| || | |||||||||||
Sbjct 273781 CATGAACAAATCAGGAATCCATAATGCTGGGAATAAATCTCTTGCACGAATTTCTTCTTT 273840
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
|| || |||||| | | ||| | ||||||||| |||||||||||||||||||| |||||
Sbjct 273841 ACCATGGTTCTTTCTGATATCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAATA 273900
Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112
| || || || ||| || ||||||||||| || || | |||||| | ||
Sbjct 273901 AAGGGCGAATGCTCCAGGTCTCTTATTGCCACCTTGATCCACATAACGTGCAGTGTTGTT 273960
Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172
||||| | |||||| | ||| ||| | ||| || || || | ||| | ||
Sbjct 273961 AAAAACACGAACCATTGGGATTAAACCATTGGAAGTACCATTAGTACCTGCAATGTAAGA 274020
Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232
|| || || | ||| | ||| ||| | || || |||||||| || |||||
Sbjct 274021 ACCCGTAGAACGAATGTTATGAATATGCAACCCAATACCACCAGCAGTCTTGGAAATCAT 274080
Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292
||||| ||| | || ||| |||| |||| ||| ||| ||||||| | | |
Sbjct 274081 GGCACATTCTTTTAATGAATCATAAATACCTTCAATGGAATCGTCTTTCATCGCCACAAG 274140
Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352
|||||||| | | ||| | ||| | || |||| ||| || | || || | ||||||
Sbjct 274141 GAAACAAGATGCCATTTGTGGATGTGGAGTACCTGCATTGAAAAGAGTTGGAGAAGCATG 274200
>seq3
Length=1313108
Score = 120 bits (132), Expect = 2e-22
Identities = 292/437 (67%), Gaps = 14/437 (3%)
Strand=Plus/Plus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
||| || |||||||| ||||| | |||| ||||||||||| ||||||| ||| || ||
Sbjct 879008 CATGAACAAATCTGGTATCCATAGTGCAATGAATAAATCTCTGGCTCTCAATTCATCCTT 879067
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
|| || || ||| ||| | || |||||||||| |||||| ||||| ||||| | |||
Sbjct 879068 ACCATGGTTTTTTCTTAATTGCAAAAAATCAAAAACATCTGAATGCCAGGGTTCCAGATA 879127
Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112
||| | |||| | || ||| || || ||||| ||||| || || | |||
Sbjct 879128 TATACAGTATGCACCTGGACGCTTGTTTCCTCCCTGGTCTACATATCTAGCCGTATTATT 879187
Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172
|||||| | ||| || | || |||| | |||| || || | | | | |
Sbjct 879188 GAAAACACGAAGCATGGGGATTAGTCCACTAGAAATACCATTAGATCCCGATACATAAGC 879247
Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACC---AGCCCATTTTGAAAT 26229
|| ||| || || | ||||| |||||| |||||||| |||| || || ||
Sbjct 879248 CCCATTCGCCCTTATGTTAGAAGCATAAATACCAATTCCACCTGAAGCC---TTGGAGAT 879304
Query 26230 AGCTGCACAATC-TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTA 26288
| || ||| || || ||| ||| ||||| | || ||| ||||||| || |
Sbjct 879305 AAGAGCTGTATCATGCAA-TGTTCGGAAGATTCCATCAATAGAATCCTCTTTCATACCAA 879363
Query 26289 ATAAAAAACAAGAAGATA---ATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTG 26345
|| |||||| ||||| | |||| || | |||||||| ||||| ||||| || |
Sbjct 879364 CTAGAAAACAGGAAGAAAGATATTG---ATTAACTGTTCCTGCGTTAAACAATGTGGGCG 879420
Query 26346 TAGCATGAGTATAATAT 26362
|||||| || | |||
Sbjct 879421 ATGCATGAATAAAGTAT 879437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039839635900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |