Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq6 178 2e-39 seq4 105 8e-18 seq7 93.3 5e-14 >seq6 Length=915354 Score = 178 bits (196), Expect = 2e-39 Identities = 843/1318 (64%), Gaps = 40/1318 (3%) Strand=Plus/Minus Query 75298 AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGAT 75357 |||||| ||||| || || | ||||| || |||||||| ||||| ||| || || || Sbjct 274212 AGGTAT-TTCATCCATGCTTCTCCAACTCTTTTCAATGCAGGTACTCCACATCCACAAAT 274154 Query 75358 GTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCT 75417 | | ||| |||||| | || | || || || || || | ||||| |||| | | Sbjct 274153 GGCATCTTGTTTCCTTGTGGCGATGAAAGACGATTCCATTGAAGGTATTTATGATTCATT 274094 Query 75418 TACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGT 75477 | || ||||| || || ||| ||||| ||||||||| |||| || ||| | | Sbjct 274093 AAAAGAATGTGCCATGATTTCCAAGACTGCTGGTGGTATTGGGTTGCATATTCATAACAT 274034 Query 75478 GAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAAT 75537 | | | ||| ||| || || |||||| || ||||| | || ||||| Sbjct 274033 TCGTTCTACGGGTTCTTACATTGCAGGTACTAATGGTACTTCCAATGGTTTAATCCCAAT 273974 Query 75538 GCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAGG---G 75594 | |||| || |||||| ||| || || ||||| |||||| | ||| || | Sbjct 273973 GGTTCGTGTTTTTAACAACACTGCACGTTATGTGGATCAAG-GTGGCAATAAGAGACCTG 273915 Query 75595 GTCCAT-CGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTAC 75653 | ||| ||| | || |||||||||||||| | |||||| | || ||| |||| | Sbjct 273914 GAGCATTCGCCCTTTATTTGGAACCATGGCACTCAGATATCTTTGATTTCATTGATATCA 273855 Query 75654 GACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTC 75713 || ||||| ||| | ||||| ||| |||||| | || || | | ||||||| Sbjct 273854 GAAAGAACCATGGTAAAGAAGAAATTCGTGCAAGAGATTTATTCCCAGCATTATGGATTC 273795 Query 75714 CAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACA 75773 | || | |||||||| || || || || || ||||| | ||||||| |||| Sbjct 273794 CTGATTTGTTCATGAAACGTGTCGAAAAGAATGAAGAATGGACACTTTTCTCTCCAAGTG 273735 Query 75774 AGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATG 75833 | || || ||| | | || | ||||| || |||||| | ||| | |||| Sbjct 273734 AAGCTCCTGGTTTAGCAGATGTATATGGTGAAGAATTTGAAAAATTGTACGAACGTTATG 273675 Query 75834 AAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTC 75892 || | || || | | | ||| | ||| | | ||| ||| | || ||| | Sbjct 273674 AACAAGAAGGCCGTGGTAGAAAGACAATTAGAGCT-CAAAAGTTGTGGTATGCCATTTTA 273616 Query 75893 AAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAG 75952 || |||| || || ||||| ||||| | ||||| || |||||||| ||||| | ||| Sbjct 273615 GAAGCACAAACTGAAACTGGTACACCTTTCATGCTCTATAAGGATGCATGTAATGAAAAG 273556 Query 75953 AGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAG 76012 |||||||||||||| | || || || || ||| | || ||||| | || Sbjct 273555 AGTAACCAAAAGAACCTTGGTGTGATTAAATCTTCCAATTTATGTTGTGAAATCGTGGAA 273496 Query 76013 TACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCA------ 76066 ||| | || |||||||| || || ||||| ||||| || || ||||| | ||| Sbjct 273495 TACTCTGACAAGGATGAAACTGCAGTTTGTAATTTAGCTTCTATCGCATTACCATCTTGT 273436 Query 76067 ----AAGTAT-GTCA-ATG--AAG--AGACTCGCACTTTTGATTATGAAAAACTTCATGA 76116 |||||| | || ||| ||| | | | | || || || ||| | ||||| Sbjct 273435 GTGGAAGTATCGGCAGATGGTAAGGAACAATGGTAC----AGTTTTGCCAAATTACATGA 273380 Query 76117 AATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT 76176 | || | || | |||| ||| | ||| |||||||| | || | || || || Sbjct 273379 AGTCGCTAAAGCTATTACACGTAATTTGAACAAGGTCATTGATCGTAACTACTACCCAGT 273320 Query 76177 TGAGACTG-CGCGAA-AG-TCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGG 76233 | ||| || || || || |||||| |||| |||||||||| | |||||| | || Sbjct 273319 T---CCTGAAGCCAAGAGATCCAATATGAGACATAGACCTATTGCACTTGGTGTTAATGG 273263 Query 76234 TCTCGCGGATGTATTTATTTTG-TGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGA 76292 | || || ||||| || ||| || | ||||||| || ||| || || Sbjct 273262 GTTAGCAGACACTTTTATGATGTTGCGTCTGC-CATTTGAATCTCCTGAGGCAAAAATAT 273204 Query 76293 TGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGG 76352 |||| | || |||||||| || || |||| || |||| ||||||||||| Sbjct 273203 TGAACCAACAAATTTTTGAAACTATTTACCACGGTGCCTTGGAACAATCTTGTGAATTGG 273144 Query 76353 CTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTC 76412 | | || ||| | ||| || | ||| ||||| || |||||||| | | | Sbjct 273143 CCAAGATTCACGGTACTTATTCTACCTATGAAGGTTCCCCTATCTCCCAAGGTCTTTTAC 273084 Query 76413 AGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTA--CGACTGGGATGTTCTCAAGGA 76470 | |||||| | |||| || ||| || | || || || ||||| | | | Sbjct 273083 AATTTGATCTTTGGG-AGAAGAATCC-TTCAGAATTATGGGATTGGGAACCATTGAGACA 273026 Query 76471 ACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTC 76530 | |||| || || | ||| | | ||| | || |||| || ||||| || || || Sbjct 273025 AGGCATTAAAGAACATGGTGTAAGAAACTCATTATTAGTGGCCCCTATGCCCACTGCTTC 272966 Query 76531 CACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 || |||||||||||||| | || ||||| || ||||| |||||| | ||||| ||| Sbjct 272965 AACATCACAAATCTTGGGTTACAACGAATGTTTCGAACCTTACACATCTAACATGTAC 272908 >seq4 Length=1229640 Score = 105 bits (116), Expect = 8e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 27901 TCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGA 27960 |||||||| || || ||||||||| || |||||||| |||||||| || || || | Sbjct 1017397 TCAAAGTCCTTATCAGTGTGATTGAACAGGACGACTTTAACTTCACCAGTGTAATCTCTA 1017338 Query 27961 TCAATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCA 28020 || |||||||| ||||| ||||||||| | ||| || || ||||| || ||||||||| Sbjct 1017337 TCGATAACACCAGCACCGGTTTGAATACCGTTCTTTACGGCAAGACCTGAACGTGGTGCA 1017278 Query 28021 ACACGACCATA 28031 || | ||| || Sbjct 1017277 ACTCTACCGTA 1017267 >seq7 Length=888749 Score = 93.3 bits (102), Expect = 5e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGT 65160 || || |||||||||||||| ||||| ||| || || | ||||||||||||| |||| Sbjct 211150 GTTGAAGGTATCTTCTTCTCAGGGTCTTTCGCTGCCATCTTTTGGTTGAAGAAGAAGGGT 211091 Query 65161 CTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAG 65220 || |||||||| ||| |||||| || ||| | |||| | |||| || ||| | || Sbjct 211090 CTGATGCCAGGTCTAACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCATACC 211031 Query 65221 GAGTTTGCC 65229 || |||||| Sbjct 211030 GACTTTGCC 211022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569212229760