Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08]
52 sequences; 10,081,862 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq7 152 8e-32
seq6 105 1e-17
>seq7
Length=888749
Score = 152 bits (168), Expect = 8e-32
Identities = 361/545 (66%), Gaps = 5/545 (1%)
Strand=Plus/Plus
Query 18150 ATAATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAA 18209
|||||| ||| ||||| || || || |||||||| |||||| | || ||||||||| |
Sbjct 211012 ATAATAGACAGGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGA 211071
Query 18210 ACGTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAG 18269
| |||| || ||||| | ||| | || || | |||||| || | |||||| | |
Sbjct 211072 AGGTTAGACCTGGCATCAGACCCTTCTTCTTCAACCAAAAGATGGCAGCGAAAGACCCTG 211131
Query 18270 AAAAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTAT 18329
| ||||| ||||| ||||| || || || | ||||||||||||| || | || |
Sbjct 211132 AGAAGAAGATACCTTCAACTGCGGCAAATGCGACTAATCTTTCAGCATAA-AGGGCTTCT 211190
Query 18330 TGCTC-AGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCT 18388
| || | ||||| | ||||||||| | | || || || | ||
Sbjct 211191 TCATCTTGAATCCACCTAATGGCCCATTCTGCCTTTTCTCTGATTGGTGGGATGTTTTCA 211250
Query 18389 ATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAA 18448
|| |||||||| || ||| || ||||| || | | || || || || ||||||
Sbjct 211251 ATGGCATTAAATAAGAAATCAGCCTCCTTGGAGTCCCTACTGTAGGTATCAATCAACAAA 211310
Query 18449 GAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCC 18508
|| ||| ||||||| || ||| ||||||| || || || | || || | | ||
Sbjct 211311 GAGTACGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAACCCGTAGAAGCACTTGGCT 211370
Query 18509 TCGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCA 18568
|| ||| ||| | ||| | | || | || |||||||||||||| || ||||||||
Sbjct 211371 TCAGGAATTTGCACTTCGGCAGAGAAGTTCTCGACCAAATTCTCATTCACAATACCGTCG 211430
Query 18569 GCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GA 18625
| | ||||| || || | ||| | ||||||| | ||||| || || |
Sbjct 211431 GATGCAGCGAAGAACGCTAGAACTCTTGAAATGAAAAATCTTTCACCCTCGTTCATCTTG 211490
Query 18626 TTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGAT 18685
|||||||| ||||| | ||| | | ||| | |||||| | |||||| || |||| |
Sbjct 211491 TTGTTCCAGTCATCCAAATCCTGCTGCAAATCGATTTCTTCTGCTGTCCAGAATGATGCT 211550
Query 18686 TCGGC 18690
|| ||
Sbjct 211551 TCTGC 211555
Score = 150 bits (166), Expect = 3e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || |||| || | || || || || || || || ||||| ||| ||||
Sbjct 735511 ATGCAGATTTTCGTTAAGACTCTAACCGGTAAGACCATCACTTTGGAAGTGGAATCTTCT 735570
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| ||||| ||| ||| || || || ||||||||||| |||||||| |||
Sbjct 735571 GATACTATCGACAACGTCAAATCTAAGATCCAGGACAAAGAAGGCATTCCTCCAGACCAA 735630
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| |||||||||| ||| |||||||| || || ||| |||||||||||| ||||| ||
Sbjct 735631 CAGAGATTGATTTTTGCAGGTAAGCAACTTGAGGATGGCAGAACTTTATCTGATTACAAC 735690
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || || | || ||||| || || ||||| ||||||| |||
Sbjct 735691 ATCCAGAAGGAATCTACTCTTCACTTGGTTCTAAGACTAAGAGGTGGT 735738
Score = 136 bits (150), Expect = 6e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || |||| || |||||||| || |||||||| || || || ||| ||||
Sbjct 735055 ATGCAGATTTTCGTTAAGACTTTGACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCT 735114
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| || ||||| || || || ||||| || ||||| || ||||| || |||
Sbjct 735115 GATACCATCGACAACGTTAAGTCAAAGATCCAAGACAACGAAGGTATTCCTCCGGATCAA 735174
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| |||||||||| ||| || ||||| || ||||| |||||||| || ||||| ||
Sbjct 735175 CAGAGATTGATTTTTGCTGGAAAGCAACTGGAAGACGGTAGAACTTTGTCTGATTACAAC 735234
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || || | || ||||| || || || ||||||||||| |||
Sbjct 735235 ATCCAGAAGGAATCCACTCTTCACTTGGTCTTGAGATTAAGAGGTGGT 735282
Score = 123 bits (136), Expect = 4e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | || || | ||||| |||||||| || ||||||||||| |||
Sbjct 735283 ATGCAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 735342
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || || || || || || ||||| || || || || |||
Sbjct 735343 GACACCATCGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATTCCACCCGACCAA 735402
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| ||| |||||| ||| ||||||||||| |||||| |||||| |||| ||||| |||
Sbjct 735403 CAGAGACTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCAGAACACTATCTGATTACAAT 735462
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || || | || || || || || ||||| ||||||| |||
Sbjct 735463 ATCCAGAAGGAATCTACTCTGCACTTGGTTCTAAGACTAAGAGGTGGT 735510
Score = 109 bits (120), Expect = 8e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | || || | ||||| |||||||| || ||||||||||| |||
Sbjct 735967 ATGCAAATCTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 736026
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || || || || ||||| || || || |||||||| |||
Sbjct 736027 GACACCATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAA 736086
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||| | || | ||| |||||||| || || ||| |||||| | || ||||| ||
Sbjct 736087 CAAAGACTAATCTTTGCTGGTAAGCAACTTGAGGATGGCAGAACCCTGTCTGATTACAAC 736146
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || || | || || || | || ||||||||||||| |||
Sbjct 736147 ATCCAGAAGGAATCTACTCTGCACCTGGTTCTAAGATTAAGAGGTGGT 736194
Score = 100 bits (110), Expect = 4e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || |||| || | || || || ||||| || | ||||| ||| ||||
Sbjct 735739 ATGCAAATTTTCGTTAAGACTCTAACCGGTAAGACTATCACTCTGGAAGTGGAATCTTCT 735798
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| || ||||| || || || ||||| || ||||| || || ||||| |||
Sbjct 735799 GATACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAA 735858
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| ||| | |||| ||| ||||| || | ||||| |||||| | || ||||| ||
Sbjct 735859 CAGAGACTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTGTCTGATTACAAC 735918
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || || | || || || || || || ||||||||||| |||
Sbjct 735919 ATTCAGAAGGAATCTACTCTGCACTTGGTCTTGAGATTAAGAGGTGGT 735966
Score = 87.8 bits (96), Expect = 3e-12
Identities = 153/221 (69%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | || || |||||||| || || || || || || |||||| ||||| | |||
Sbjct 849486 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGACACCATT 849427
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
||||| || || || || || || ||||| || || || || |||||||||||
Sbjct 849426 GACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATTA 849367
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | || |||||||| | |||||| ||||| || || || || | | |||||||
Sbjct 849366 ATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCTGACTACA--ACATCCAAA 849309
Query 156012 --GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| | || | || || || ||||||| ||||| |||
Sbjct 849308 AGGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGGT 849268
>seq6
Length=915354
Score = 105 bits (116), Expect = 1e-17
Identities = 165/234 (71%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| ||||| || ||| | || || ||||| || || || ||||| ||||||| ||| |
Sbjct 604957 AAGATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATCT 604898
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| | |||| || || || || || || || || || || || || || ||
Sbjct 604897 TCTGACACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGAC 604838
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| |||||||| | |||||| ||||| || || || ||
Sbjct 604837 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTAC 604778
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| || | || | || || || ||||||| ||||| ||||
Sbjct 604777 A--ACATCCAAAAGGAATCCACCTTGCACTTGGTCCTAAGATTGAGAGGTGGTG 604726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871524283200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |