Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq7 152 8e-32 seq6 105 1e-17 >seq7 Length=888749 Score = 152 bits (168), Expect = 8e-32 Identities = 361/545 (66%), Gaps = 5/545 (1%) Strand=Plus/Plus Query 18150 ATAATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAA 18209 |||||| ||| ||||| || || || |||||||| |||||| | || ||||||||| | Sbjct 211012 ATAATAGACAGGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGA 211071 Query 18210 ACGTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAG 18269 | |||| || ||||| | ||| | || || | |||||| || | |||||| | | Sbjct 211072 AGGTTAGACCTGGCATCAGACCCTTCTTCTTCAACCAAAAGATGGCAGCGAAAGACCCTG 211131 Query 18270 AAAAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTAT 18329 | ||||| ||||| ||||| || || || | ||||||||||||| || | || | Sbjct 211132 AGAAGAAGATACCTTCAACTGCGGCAAATGCGACTAATCTTTCAGCATAA-AGGGCTTCT 211190 Query 18330 TGCTC-AGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCT 18388 | || | ||||| | ||||||||| | | || || || | || Sbjct 211191 TCATCTTGAATCCACCTAATGGCCCATTCTGCCTTTTCTCTGATTGGTGGGATGTTTTCA 211250 Query 18389 ATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAA 18448 || |||||||| || ||| || ||||| || | | || || || || |||||| Sbjct 211251 ATGGCATTAAATAAGAAATCAGCCTCCTTGGAGTCCCTACTGTAGGTATCAATCAACAAA 211310 Query 18449 GAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCC 18508 || ||| ||||||| || ||| ||||||| || || || | || || | | || Sbjct 211311 GAGTACGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAACCCGTAGAAGCACTTGGCT 211370 Query 18509 TCGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCA 18568 || ||| ||| | ||| | | || | || |||||||||||||| || |||||||| Sbjct 211371 TCAGGAATTTGCACTTCGGCAGAGAAGTTCTCGACCAAATTCTCATTCACAATACCGTCG 211430 Query 18569 GCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GA 18625 | | ||||| || || | ||| | ||||||| | ||||| || || | Sbjct 211431 GATGCAGCGAAGAACGCTAGAACTCTTGAAATGAAAAATCTTTCACCCTCGTTCATCTTG 211490 Query 18626 TTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGAT 18685 |||||||| ||||| | ||| | | ||| | |||||| | |||||| || |||| | Sbjct 211491 TTGTTCCAGTCATCCAAATCCTGCTGCAAATCGATTTCTTCTGCTGTCCAGAATGATGCT 211550 Query 18686 TCGGC 18690 || || Sbjct 211551 TCTGC 211555 Score = 150 bits (166), Expect = 3e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || |||| || | || || || || || || || ||||| ||| |||| Sbjct 735511 ATGCAGATTTTCGTTAAGACTCTAACCGGTAAGACCATCACTTTGGAAGTGGAATCTTCT 735570 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||||| ||| ||| || || || ||||||||||| |||||||| ||| Sbjct 735571 GATACTATCGACAACGTCAAATCTAAGATCCAGGACAAAGAAGGCATTCCTCCAGACCAA 735630 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||||| ||| |||||||| || || ||| |||||||||||| ||||| || Sbjct 735631 CAGAGATTGATTTTTGCAGGTAAGCAACTTGAGGATGGCAGAACTTTATCTGATTACAAC 735690 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || || | || ||||| || || ||||| ||||||| ||| Sbjct 735691 ATCCAGAAGGAATCTACTCTTCACTTGGTTCTAAGACTAAGAGGTGGT 735738 Score = 136 bits (150), Expect = 6e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || |||| || |||||||| || |||||||| || || || ||| |||| Sbjct 735055 ATGCAGATTTTCGTTAAGACTTTGACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCT 735114 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || ||||| || || || ||||| || ||||| || ||||| || ||| Sbjct 735115 GATACCATCGACAACGTTAAGTCAAAGATCCAAGACAACGAAGGTATTCCTCCGGATCAA 735174 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||||| ||| || ||||| || ||||| |||||||| || ||||| || Sbjct 735175 CAGAGATTGATTTTTGCTGGAAAGCAACTGGAAGACGGTAGAACTTTGTCTGATTACAAC 735234 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || || | || ||||| || || || ||||||||||| ||| Sbjct 735235 ATCCAGAAGGAATCCACTCTTCACTTGGTCTTGAGATTAAGAGGTGGT 735282 Score = 123 bits (136), Expect = 4e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || | ||||| |||||||| || ||||||||||| ||| Sbjct 735283 ATGCAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 735342 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| || || || || || || ||||| || || || || ||| Sbjct 735343 GACACCATCGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATTCCACCCGACCAA 735402 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| |||||| ||| ||||||||||| |||||| |||||| |||| ||||| ||| Sbjct 735403 CAGAGACTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCAGAACACTATCTGATTACAAT 735462 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || || | || || || || || ||||| ||||||| ||| Sbjct 735463 ATCCAGAAGGAATCTACTCTGCACTTGGTTCTAAGACTAAGAGGTGGT 735510 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || | ||||| |||||||| || ||||||||||| ||| Sbjct 735967 ATGCAAATCTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 736026 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| || || || || ||||| || || || |||||||| ||| Sbjct 736027 GACACCATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAA 736086 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 |||||| | || | ||| |||||||| || || ||| |||||| | || ||||| || Sbjct 736087 CAAAGACTAATCTTTGCTGGTAAGCAACTTGAGGATGGCAGAACCCTGTCTGATTACAAC 736146 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || || | || || || | || ||||||||||||| ||| Sbjct 736147 ATCCAGAAGGAATCTACTCTGCACCTGGTTCTAAGATTAAGAGGTGGT 736194 Score = 100 bits (110), Expect = 4e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || |||| || | || || || ||||| || | ||||| ||| |||| Sbjct 735739 ATGCAAATTTTCGTTAAGACTCTAACCGGTAAGACTATCACTCTGGAAGTGGAATCTTCT 735798 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || ||||| || || || ||||| || ||||| || || ||||| ||| Sbjct 735799 GATACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAA 735858 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| | |||| ||| ||||| || | ||||| |||||| | || ||||| || Sbjct 735859 CAGAGACTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTGTCTGATTACAAC 735918 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || || | || || || || || || ||||||||||| ||| Sbjct 735919 ATTCAGAAGGAATCTACTCTGCACTTGGTCTTGAGATTAAGAGGTGGT 735966 Score = 87.8 bits (96), Expect = 3e-12 Identities = 153/221 (69%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891 ||| | || || |||||||| || || || || || || |||||| ||||| | ||| Sbjct 849486 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGACACCATT 849427 Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951 ||||| || || || || || || ||||| || || || || ||||||||||| Sbjct 849426 GACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATTA 849367 Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011 || | || |||||||| | |||||| ||||| || || || || | | ||||||| Sbjct 849366 ATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCTGACTACA--ACATCCAAA 849309 Query 156012 --GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || | || | || || || ||||||| ||||| ||| Sbjct 849308 AGGAATCTACTTTGCACTTGGTTCTAAGATTGAGAGGTGGT 849268 >seq6 Length=915354 Score = 105 bits (116), Expect = 1e-17 Identities = 165/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || ||||| || ||| | || || ||||| || || || ||||| ||||||| ||| | Sbjct 604957 AAGATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATCT 604898 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||| | |||| || || || || || || || || || || || || || || Sbjct 604897 TCTGACACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGAC 604838 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||||||||||| | ||| |||||||| | |||||| ||||| || || || || Sbjct 604837 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTAC 604778 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 | | ||||||| || | || | || || || ||||||| ||||| |||| Sbjct 604777 A--ACATCCAAAAGGAATCCACCTTGCACTTGGTCCTAAGATTGAGAGGTGGTG 604726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871524283200