Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq6 138 3e-27 seq3 136 1e-26 seq9 122 3e-22 seq51 105 2e-17 seq4 105 2e-17 >seq6 Length=915354 Score = 138 bits (152), Expect = 3e-27 Identities = 217/311 (70%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 |||||||| ||||| ||||| || ||||| || || || |||| | ||| || || | | Sbjct 273926 TTGCCACCTTGATCCACATAACGTGCAGTGTTGTTAAAAACACGAACCATTGGGATTAAA 273985 Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179 ||||||||||| ||||| || || ||| | ||||| | || |||| ||||||||| Sbjct 273986 CCATTGGAAGTACCATTAGTACCTGCAATGTAAGAACCCGTAGAACGAATGTTATGAATA 274045 Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239 || | ||||||||||| | || ||||| || ||||| |||| | || || Sbjct 274046 TGCAACCCAATACCACCAGCAGTCTTGGAAATCATGGCACATTCTTTTAATGAATCATAA 274105 Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299 ||||||||||| ||||| |||| ||| | | || | || || | ||| || || Sbjct 274106 ATACCTTCAATGGAATCGTCTTTCATCGCCACAAGGAAACAAGATGCCATTTGTGGATGT 274165 Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAA 156359 || || || || ||||| || || || | ||||| || |||||| | ||||| || Sbjct 274166 GGAGTACCTGCATTGAAAAGAGTTGGAGAAGCATGGATGAAATACCTCAATGACATCAAA 274225 Query 156360 TCGTATGTCTC 156370 | ||| || || Sbjct 274226 TTGTAAGTTTC 274236 >seq3 Length=1313108 Score = 136 bits (150), Expect = 1e-26 Identities = 227/326 (70%), Gaps = 4/326 (1%) Strand=Plus/Minus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 ||| ||| || ||| || || |||| | ||||| |||||||| ||||||||||| || Sbjct 473527 ATCGTAATGAACCATGATATCCTCCAAAGCCTTGACCAAACGACGTTGAATATAACCCGT 473468 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672 | || || || || || ||||| || | ||| |||||||||||||||||||||| || Sbjct 473467 TTCAGCCGTCTTCACGGCAGTATCGATCAAACCTTCACGACCACCCATAGCATGGAAAAA 473408 Query 302673 TAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG 302732 | ||||| ||| ||| || | | | | ||| | || || ||||| | || || Sbjct 473407 GAACTCTTGAGGTGTTAGACCTCTTAAATATGAGTTTTCGACAAAACCTTTAGATTCAGG 473348 Query 302733 CGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACG 302792 ||||| ||| ||| | ||| || || || || | || || | ||| | | ||||| Sbjct 473347 CGAATAATCGTCCTTTGAAAAATGAGGTAGAGTACGGTCAACAAAACCGAAAGCAATACG 473288 Query 302793 CTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACT 302852 ||| || |||||| || ||||||| || | ||| || | |||||| ||| | Sbjct 473287 CTTACCCTCAACGGATTGTTGTCCCACACATGCGGACATTTGTGCAATATT--AATGAAA 473230 Query 302853 G--CCCTTGGAGCCAGCATTTACCAT 302876 | ||||| || |||||| ||||||| Sbjct 473229 GAACCCTTTGAACCAGCACTTACCAT 473204 Score = 96.9 bits (106), Expect = 1e-14 Identities = 92/117 (79%), Gaps = 3/117 (3%) Strand=Plus/Plus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||| | ||||||||||||||| || ||||| | |||| || ||||||||||| Sbjct 783747 AATTTCCTTAATACGGGGAACACCCAATGTGACGTT---CATGGAGGCGACACCAGCAAA 783803 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 ||||||||| || | ||| | ||||||| ||| ||||||||| |||||| |||| Sbjct 783804 GTGGAAAGTCTTTAAAGTCATTTGAGTACCTGGTTCACCAATAGATTGTGCACCAAT 783860 Score = 87.8 bits (96), Expect = 5e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 155592 GACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAGCAC 155651 || |||||||| || || || ||||| | | | || || ||||||||||||||||| Sbjct 878682 GAAGCCAGATTGCACACTGCTGTCTCATCTTTGGAACTATACTCTACAATCTCACAGCAT 878741 Query 155652 AGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCC 155711 | |||||| || ||||| || ||||| || || || |||||| |||||| | |||| Sbjct 878742 AAATTAGAAGATTTAATGGTACCCAAATTTTTTTGATTTGATTTAAAGTTACATGAATCC 878801 Query 155712 TTGTATAGAAT 155722 ||||| || || Sbjct 878802 TTGTAAAGCAT 878812 >seq9 Length=446282 Score = 122 bits (134), Expect = 3e-22 Identities = 323/479 (67%), Gaps = 21/479 (4%) Strand=Plus/Plus Query 288874 AATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTT 288933 || ||| ||| | |||||| | |||||| || | || | ||||| | | || | | Sbjct 223101 AAAGCTCTGTCCAGTATATCAGGTCTGTTAGTACCAGCAAGAACAACTACATGATCTGCT 223160 Query 288934 TGCTTAAATCCATCCATACTTGTTAA--AATTTGATTAA-GTGTTTGTTCCCTTTCATCA 288990 | | || |||||||| || || |||| | |||| |||||| || ||||| ||| Sbjct 223161 GGTGTGAAACCATCCAT-CTCCACAAGCAATTGGTTTAAAGTGTTT--TCTCTTTCGTCA 223217 Query 288991 TTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCA 289050 || | |||| ||| |||| || || | |||||| | ||||||||||| ||| Sbjct 223218 TTAGCACCTGAAAAATTACCCT--TCTGTC-TAGCTTTACCGATGGCATCAATTTCATCA 223274 Query 289051 ATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGAT 289110 | ||| |||| | || | ||| | || ||| | || | || || || | || Sbjct 223275 ACGAAGATCATGGATGGCGCATTCTCCCTAGCAGTCTTGAAAAGGTCCCTAACTCTTGAG 223334 Query 289111 GCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACA 289170 || |||| ||||||| ||||||| |||||||||||| | || || | ||| | ||| Sbjct 223335 GCACCAACACCAACAAACATTTCCACAAATTCAGAACCAGAAACGAAATAGAAGGGAACA 223394 Query 289171 TTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCT 289230 ||||| || || |||| | |||| | ||||||||| || || |||| | || Sbjct 223395 CCAGCTTCACCAGCAGTTGCCTTAGCCAATAATGTCTTACCAGTACC---TGGTGCACCT 223451 Query 289231 AATAGAA---CTCCCTTTGGTACTTTTGCCCCAGCAGACTTAT-ATTTCT-CAGGGCTCT 289285 |||||| | ||| |||| | ||| ||||| || ||| | || || | || ||| Sbjct 223452 GATAGAATAGCACCCCTTGGGATTTTAGCCCC--CA-TCTTCTCATACCTAGAAGGTTCT 223508 Query 289286 TTAAAAATTCT-ACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 || |||| || |||| ||||||| ||| | ||| || |||||||| |||||||| || Sbjct 223509 TTCAAAAAGCTCACAAACTCCTCAATTTCTTCTTTGGCTTCATCACAACCTGCTACGTC 223567 >seq51 Length=2119 Score = 105 bits (116), Expect = 2e-17 Identities = 382/584 (65%), Gaps = 18/584 (3%) Strand=Plus/Plus Query 251413 CCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGT-CATATAGCCGACCCTT 251471 ||||| || ||| | || || ||| | ||||||||||| | ||| | | || || Sbjct 85 CCACAAATACCACAAATGTGAACTCTGAAGGCATCAGATGCTTCCATTAATCTTTCCTTT 144 Query 251472 GGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAG 251531 | |||| || ||||||||| | ||||||||||||||||||||| |||||||| | | Sbjct 145 AGGAAAGC-AGCTGCACCGTGCGCAATCATACAATCACGCTCCATCTCACCGAATCTTAA 203 Query 251532 ACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGAT 251591 |||||| || | | ||||| || |||| || | || ||| ||| ||||| Sbjct 204 ACCACCGTCTCTTGATCTACCTTCAACAGGTTGTCTCGTTAGAACTTGCATTGGACC--A 261 Query 251592 GGAGCGGCT--ATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGA 251649 |||| | ||| ||| |||| |||||| || | ||||| |||||| ||| ||| Sbjct 262 CGAGCTCTTGCATGAATCTTGTCATCTACCATGTGTCTTAGACGTTGGTAGTATGTGGGG 321 Query 251650 CCGATGAAGATGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTT 251709 || | ||| || || | || || ||||| || | || ||||| ||||| Sbjct 322 CCAAAGAAAATTTGTGACATTAATTTCTTACCAGTATGACCATTGTACATGACTTCAAAA 381 Query 251710 CCATTAGATTCATAACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTG 251769 ||| ||||| |||||| ||| | || | | ||| | | | | ||| | Sbjct 382 CCACGAGATTGATAACCGTGTTCACGAAGTAGTTTCGATATACCCTCCA-CAGTAATAT- 439 Query 251770 CTAAAACTGGTG--CCGTCTCCGTAAAGACC---CATTTGAATCAACACTTTGCCTAAAA 251824 || || ||| | | || || | | ||| || || || ||||| | || | Sbjct 440 CTGTAAATGGAGAAGCATCACCTTCATTACCAGACA-ATGCTGCA--ACTTTACTCAATA 496 Query 251825 GTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGA 251884 | || | | || |||| ||||||||| ||||| ||||| || |||||||| | Sbjct 497 GACATTCGATTAAATGCGCGACTGTCATACGAGATGGAATGGCATGAGGGTTGATGATCA 556 Query 251885 TGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCA 251943 || ||| | || |||||||| || ||||||| ||| || | ||| | | ||| Sbjct 557 AATCAGGTACAATACCTTCAGCAGTAAATGGCATAT-CTTCTCTACCATAGGTAATACCA 615 Query 251944 ATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 || || |||||||| ||||||||||| || |||||||| || Sbjct 616 ATGGTACCCTTTTGACCGTGACGAGATGCAAATTTATCACCGAT 659 >seq4 Length=1229640 Score = 105 bits (116), Expect = 2e-17 Identities = 343/523 (66%), Gaps = 16/523 (3%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| ||||||| | |||| ||||| || | | ||||| ||| || || | Sbjct 1013230 CTATCAAATCTACCAGGTCTCATTAAAGCTGGATCCAGGACATCGGGTCTATTGGTACCG 1013289 Query 288910 GCCAATACAACAA-TAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAA-AATTTGAT 288967 || | || || | | ||| | | | || |||||||||||| | | |||| | | Sbjct 1013290 GCTAGAACGACCACTTGATCGGATGTACT-AAATCCATCCATTTCTACCAGCAATTGGTT 1013348 Query 288968 TAAGTGTTTGTTCCCTTTCATCATTTGAACCTC---TTGAATCACCCGAATCGCTCCttt 289024 |||| || ||| |||||||| || | ||| | | | | |||| | | || || Sbjct 1013349 TAAG-GTCGCTTCTCTTTCATCGTTAGCACCACCCATGGCACCACCTTTACCTCT---TT 1013404 Query 289025 ttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAA 289084 ||||| | ||||| || || |||| || || | || || | |||| || || Sbjct 1013405 CCTTACCGATGGCATCGATCTCATCAACAAAGATAATACTGGGGGCCATTTGCCTTGCCT 1013464 Query 289085 TTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAG 289144 | |||| | || | || | || || |||| ||||||| ||||||||||||| |||| Sbjct 1013465 GTTCAAACATATCACGAACTCTAGAAGCACCAACACCAACAAACATTTCTACAAACTCAG 1013524 Query 289145 AAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 | | || ||| | ||| | ||| || || |||||| ||| | |||||||| | Sbjct 1013525 ACCCTGACACTGATAAGAACGGTACGCCGGCCTCACCTGCTGTAGCCTTAGCCAGAAGCG 1013584 Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCA--G 289261 ||||||| || || ||||| || ||| | | || |||| | || || |||| | Sbjct 1013585 TCTTACCAGTACCTGGTGGACCAGATAAAATCGCACCTCTTGGAATCTTAGCGCCCAACG 1013644 Query 289262 CAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG 289321 ||| | || |||||||| |||||| || | |||| |||| | ||| | || | Sbjct 1013645 CAG---TGTACTTCTCAGGCTTCTTTAGGAAATGAACAAATTCCATGATTTCCTGCTTGG 1013701 Query 289322 CCTCATCACATCCTGCTACATCAGCAAAAGTAATATTAATATC 289364 |||||| || || || ||||| ||| ||| || ||||| Sbjct 1013702 CCTCATTGCAACCAGCGACATCCTGGAAACTAACCTTGATATC 1013744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816619401524