Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq7 141 8e-29 seq6 120 3e-22 >seq7 Length=888749 Score = 141 bits (156), Expect = 8e-29 Identities = 169/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 24696 TTGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAG 24755 |||||| |||||||| || |||| || | || ||||| |||||||| | || || | Sbjct 735047 TTGATATTATGCAGATTTTCGTTAAGACTTTGACTGGTAAGACTATTACCTTGGAGGTTG 735106 Query 24756 AAGCCACCGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCT 24814 || | | || || | || |||| ||| |||| |||||||||||| ||||| || ||| Sbjct 735107 AATCTTCTGATACCATCGACAACGTTAAGTCAAA-GATCCAAGACAACGAAGGTATTCCT 735165 Query 24815 CCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA 24874 || |||||||| | ||||| ||||| || || || ||||| || |||| |||| Sbjct 735166 CCGGATCAACAGAGATTGATTTTTGCTGGAAAGCAACTGGAAGACGGTAGAACTTTGTCT 735225 Query 24875 GATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 ||||| ||||| || |||||||| || || |||||||| ||| |||| Sbjct 735226 GATTACAACATCCAGAAGGAATCCACTCTTCACTTGGTCTTGAGATT 735272 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || |||| || ||||||||||| || || || | ||||| ||| | | Sbjct 735511 ATGCAGATTTTCGTTAAGACTCTAACCGGTAAGACCATCACTTTGGAAGTGGAATCTTCT 735570 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| |||||||| ||||||||||| || ||||| || ||| Sbjct 735571 GATACTATCGACAACGTCAAATCTAAGATCCAGGACAAAGAAGGCATTCCTCCAGACCAA 735630 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||| ||||| || || || || |||||| |||| | || ||||| ||| Sbjct 735631 CAGAGATTGATTTTTGCAGGTAAGCAACTTGAGGATGGCAGAACTTTATCTGATTACAAC 735690 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || |||||||| || || |||||||| Sbjct 735691 ATCCAGAAGGAATCTACTCTTCACTTGGT 735719 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || ||||||||||| ||||| || || ||||| ||| | | Sbjct 735739 ATGCAAATTTTCGTTAAGACTCTAACCGGTAAGACTATCACTCTGGAAGTGGAATCTTCT 735798 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||||||||| ||||| || || || || ||| Sbjct 735799 GATACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAA 735858 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| || ||||| | || || |||| |||| ||||| ||| Sbjct 735859 CAGAGACTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTGTCTGATTACAAC 735918 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 ||||| |||||||| || || |||||||| ||| |||| Sbjct 735919 ATTCAGAAGGAATCTACTCTGCACTTGGTCTTGAGATT 735956 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || ||||| ||||||||||| || | ||||| || | || Sbjct 735967 ATGCAAATCTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 736026 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||| || || || || || || ||||| || ||| Sbjct 736027 GACACCATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAA 736086 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | | |||||||| || || || || |||||| |||| | |||| ||||| ||| Sbjct 736087 CAAAGACTAATCTTTGCTGGTAAGCAACTTGAGGATGGCAGAACCCTGTCTGATTACAAC 736146 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || |||||||| || || ||| |||| Sbjct 736147 ATCCAGAAGGAATCTACTCTGCACCTGGT 736175 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || ||||| ||||||||||| || | ||||| || | || Sbjct 735283 ATGCAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 735342 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||| || ||||| ||||| || || ||||| ||| Sbjct 735343 GACACCATCGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATTCCACCCGACCAA 735402 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||| ||||| || || |||||||| ||| |||| | || ||||| || Sbjct 735403 CAGAGACTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCAGAACACTATCTGATTACAAT 735462 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || |||||||| || || |||||||| Sbjct 735463 ATCCAGAAGGAATCTACTCTGCACTTGGT 735491 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || ||||| || || || | || || ||| || | ||||| | || | || || | Sbjct 849471 ACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGACACCATTGACAACGTCAAGTCA 849412 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| || ||||| ||||| || || || || |||||| | || ||||| || || || Sbjct 849411 AAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATTAATCTTCGCTGGTAAG 849352 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || |||| ||| |||| |||| || || ||||| ||||||||||| || | ||| Sbjct 849351 CAATTGGAAGATGGTAGAACGTTGTCTGACTACAACATCCAAAAGGAATCTACTTTGCAC 849292 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 ||||| | ||||| | || || Sbjct 849291 TTGGTTCTAAGATTGAGAGGTGG 849269 >seq6 Length=915354 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || || | || ||||| || ||||| || ||||| ||| | | Sbjct 604955 GATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATCTTC 604896 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||| || ||||| || || || || || || || Sbjct 604895 TGACACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGACCA 604836 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||||||||| || || || |||| ||| |||| | |||| || || || Sbjct 604835 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTACAA 604776 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||| ||||||||||| || | |||||||| | ||||| | || || || Sbjct 604775 CATCCAAAAGGAATCCACCTTGCACTTGGTCCTAAGATTGAGAGGTGGTGG 604725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897307566560