Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08]
52 sequences; 10,081,862 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq6 235 1e-56
seq3 150 4e-31
seq7 122 2e-22
>seq6
Length=915354
Score = 235 bits (260), Expect = 1e-56
Identities = 577/869 (66%), Gaps = 23/869 (3%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
||||| |||||||| ||| | |||||| |||| || | | ||||||| || |
Sbjct 274365 TATTTCGGTTTCAAGACTTTAGAACGTTCTTACTTGTTAAGGATCAATGGGTTGACTGCT 274306
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
|| | || ||||| | | | | ||| | ||||||||||| | ||||| |||
Sbjct 274305 GAGAGACCACAACATCTAATAATGAGAGTTAGTTTGGGTATTCATGGTGAAGATATCAAA 274246
Query 110424 GCTGTTATTGAATGTTA-----TGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACT 110477
||| || ||| ||| |||||| ||| || | | || |||||| ||
Sbjct 274245 TCTGCGATCGAAACTTACAATTTGATGTCATTGAG------GTATTTCATCCATGCTTCT 274192
Query 110478 CCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGA 110537
|| || || || || ||||| ||| |||| |||| ||||| || ||| | |
Sbjct 274191 CCAACTCTTTTCAATGCAGGTACTCCACATCCACAAATGGCATCTTGTTTCCTTGTGGCG 274132
Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCT 110597
|| || || ||||| |||||||||||||||||| | | |||||| ||| | |||||
Sbjct 274131 ATGAAAGACGATTCCATTGAAGGTATTTATGATTCATTAAAAGAATGTGCCATGATTTCC 274072
Query 110598 AAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657
|| | |||| || ||||| | || ||||| | ||||| || | || | | ||
Sbjct 274071 AAGACTGCTGGTGGTATTGGGTTGCATATTCATAACATTCGTTCTACGGGTTCTTACATT 274012
Query 110658 GCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACT 110717
||| | || ||| |||| | ||| | | |||||| | | || || ||| |||||
Sbjct 274011 GCAGGTACTAATGGTACTTCCAATGGTTTAATCCCAATGGTTCGTGTTTTTAACAACACT 273952
Query 110718 GCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAA 110774
||| |||||| |||||||||| ||||||| ||| |||| || | ||| | |||
Sbjct 273951 GCACGTTATGTGGATCAAGGTGGCAATAAGAGACCTGGAGCATTCGCCCTTTATTTGGAA 273892
Query 110775 CCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAA 110834
|| ||||| |||||||| ||||| ||| | || | | || || || || | |||||
Sbjct 273891 CCATGGCACTCAGATATCTTTGATTTCATTGATATCAGAAAGAACCATGG---TAAAGAA 273835
Query 110835 CAAA---GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGT 110891
||| | ||| | |||||||| ||| | |||||| | ||||| ||||||||||||
Sbjct 273834 GAAATTCGTGCAAGAGATTTATTCCCAGCATTATGGATTCCTGATTTGTTCATGAAACGT 273775
Query 110892 GTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGAT 110951
|| || | |||| ||| | ||| | | ||| | |||||||| || | |||
Sbjct 273774 GTCGAAAAGAATGAAGAATGGACACTTTTCTCTCCAAGTGAAGCTCCTGGTTTAGCAGAT 273715
Query 110952 GTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGC 111011
|||||||| |||| |||||| | | |||||| |||||| |||||||| | |
Sbjct 273714 GTATATGGTGAAGAATTTGAAAAATTGTACGAACGTTATGAACAAGAAGGCCGTGGTAGA 273655
Query 111012 AAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGA 111071
|| |||| ||||||| | | |||| || | ||| ||||| |||||||||
Sbjct 273654 AAGACAATTAGAGCTCAAAAGTTGTGGTATGCCATTTTAGAAGCACAAACTGAAACTGGT 273595
Query 111072 ACTCCTTATATTTTGTATAAAGAT-CATATTAATCGCAAATCTAATCAAATGAATTTAGG 111130
|| |||| || | ||||| ||| ||| |||| || ||| |||| ||| | ||
Sbjct 273594 ACACCTTTCATGCTCTATAAGGATGCAT-GTAATGAAAAGAGTAACCAAAAGAACCTTGG 273536
Query 111131 AACAATTAAGTCTAGTAATTTGTGCTGTG 111159
||||| ||| ||||| || ||||
Sbjct 273535 TGTGATTAAATCTTCCAATTTATGTTGTG 273507
>seq3
Length=1313108
Score = 150 bits (166), Expect = 4e-31
Identities = 463/705 (66%), Gaps = 17/705 (2%)
Strand=Plus/Minus
Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAAT-TGGCTTCTT 110523
||||||||| | || || | |||||||||||||| | | | | || | |||| |
Sbjct 879431 TATTCATGCATCGCCCACATTGTTTAACGCAGGAAC-AGTTAATCAATATCTTTCTTCCT 879373
Query 110524 GCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTAT-TTATGATGCTCTTAAAGAA 110582
| ||||| | || || || || ||||||||||| || || || || | | | ||
Sbjct 879372 GTTTTCTAGTTGGTATGAAAGAGGATTCTATTGATGGAATCTTCCGAACAT-TGCATGAT 879314
Query 110583 ACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCA 110642
|| |||||||| || || || || |||||||||||| | | | | | || | |
Sbjct 879313 ACAGCTCTTATCTCCAAGGCTTCAGGTGGAATTGGTATTTATGCTTCTAACATAAGGGCG 879254
Query 110643 AAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGA 110702
|| || || || | | | | || ||| ||| | |||||| | || ||| | |
Sbjct 879253 AATGGGGCTTATGTATCGGGATCTAATGGTATTTCTAGTGGACTAATCCCCATGCTTCGT 879194
Query 110703 GTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTT 110759
|| ||||| | || || | |||||| | || || || || | | || |||
Sbjct 879193 GTTTTCAATAATACGGCTAGATATGTAGACCAGGGAGGAAACAAGCGTCCAGGTGCATAC 879134
Query 110760 GCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAAT 110819
||| ||||| ||||| |||||||||||| | ||||| || || || | | |||||
Sbjct 879133 TGTATATATCTGGAACCCTGGCATTCAGATGTTTTTGATTTTTTGCAATTAAGAAAAAAC 879074
Query 110820 CAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTA 110879
|| || || ||| ||||| | |||||||| |||| | ||||| |||||||
Sbjct 879073 CATGGTAAGGATGAATTGAGAGCCAGAGATTTATTCATTGCACTATGGATACCAGATTTG 879014
Query 110880 TTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCT 110939
||||||||||| || || || || ||||||||| | |||| || | ||
Sbjct 879013 TTCATGAAACGCGTACAGTCTAACGGAGATTGGTCTCTTTTCAGTCCAGATGAAGCACCG 878954
Query 110940 GGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAA 110999
|| ||| |||||| || || |||||||| || || || || ||| |||||| || |
Sbjct 878953 GGCCTAAGTGATGTCTACGGCAAAGAGTTCGAGGAGCTATATGAACAATATG-AATCCAC 878895
Query 111000 GGCAAGTTTCGCAAACAAA----TTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATC 111055
|| | || ||| ||| | |||||| | || |||| |||| || || |
Sbjct 878894 GGAA---TTACCAATGAAACGTGTCAAAGCTCAGAAGCTGTGGTCTGAAATTCTACAAGC 878838
Query 111056 ACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGA-TCATATTAATCGCAAATCTA 111114
||||| ||||| || ||| | ||| | || || || |||| ||| ||||| |
Sbjct 878837 CCAAGTAGAAACAGGCGGTCCGTTTATGCTTTACAAGGATTCAT-GTAACTTTAAATCAA 878779
Query 111115 ATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159
|||||| ||||| || || ||||| ||| |||||| |||||||
Sbjct 878778 ATCAAAAAAATTTGGGTACCATTAAATCTTCTAATTTATGCTGTG 878734
Score = 96.9 bits (106), Expect = 8e-15
Identities = 143/200 (72%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 305287 AATTAATGATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCA 305346
|||| |||| |||| |||||||| | || |||| |||||| ||||| | ||
Sbjct 785763 AATTGGTGATCTTGTAGAAAGACATTTAGAAGATGGTGATGTGGTTCTTTTCAACCGTCA 785704
Query 305347 ACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAA-AGTATTATCTGGATTGA 305405
||| || ||||| | | | || || || | || | | ||| | | ||||| |
Sbjct 785703 ACCTTCTCTGCACAGATTATCGATTTTGTCACACTATGCCAAGATTCGCCCCTGGAGA-A 785645
Query 305406 CATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAA 305465
| ||| ||||||||| | ||| |||||| ||||||||||| ||||| ||||| |||||||
Sbjct 785644 CCTTTAGATTAAATGAATGTGTTTGTACTCCTTATAATGCAGATTTCGATGGTGATGAAA 785585
Query 305466 TGAATATGCATGTACCTCAA 305485
|||| ||||||| || |||
Sbjct 785584 TGAACTTGCATGTTCCCCAA 785565
>seq7
Length=888749
Score = 122 bits (134), Expect = 2e-22
Identities = 172/242 (71%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 131765 TTATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAA 131824
|||||| |||| | | || | || |||| | | | || ||||||||||| ||||
Sbjct 211264 TTATTTAATGCCATTGAAAACATCCCACCAATCAGAGAAAAGGCAGAATGGGCCATTAGG 211205
Query 131825 TGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAA 131884
|||||||||||||| || || | || |||| | || || ||||| ||||||
Sbjct 211204 TGGATTCAAGATGAAGAAGCCCTTTATGCTGAAAGATTAGTCGCATTTGCCGCAGTTGAA 211145
Query 131885 GGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATG 131944
||||| ||||| ||||| ||||| ||| ||||||||| | |||||| || |||||
Sbjct 211144 GGTATCTTCTTCTCAGGGTCTTTCGCTGCCATCTTTTGGTTGAAGAAGAAGGGTCTGATG 211085
Query 131945 CCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTT 132004
|| || || | || || || |||| || | ||||| |||| |||||||| || |||
Sbjct 211084 CCAGGTCTAACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCATACCGACTTT 211025
Query 132005 GC 132006
||
Sbjct 211024 GC 211023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812009285972
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |