Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq6 235 1e-56 seq3 150 4e-31 seq7 122 2e-22 >seq6 Length=915354 Score = 235 bits (260), Expect = 1e-56 Identities = 577/869 (66%), Gaps = 23/869 (3%) Strand=Plus/Minus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 ||||| |||||||| ||| | |||||| |||| || | | ||||||| || | Sbjct 274365 TATTTCGGTTTCAAGACTTTAGAACGTTCTTACTTGTTAAGGATCAATGGGTTGACTGCT 274306 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 || | || ||||| | | | | ||| | ||||||||||| | ||||| ||| Sbjct 274305 GAGAGACCACAACATCTAATAATGAGAGTTAGTTTGGGTATTCATGGTGAAGATATCAAA 274246 Query 110424 GCTGTTATTGAATGTTA-----TGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACT 110477 ||| || ||| ||| |||||| ||| || | | || |||||| || Sbjct 274245 TCTGCGATCGAAACTTACAATTTGATGTCATTGAG------GTATTTCATCCATGCTTCT 274192 Query 110478 CCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGA 110537 || || || || || ||||| ||| |||| |||| ||||| || ||| | | Sbjct 274191 CCAACTCTTTTCAATGCAGGTACTCCACATCCACAAATGGCATCTTGTTTCCTTGTGGCG 274132 Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCT 110597 || || || ||||| |||||||||||||||||| | | |||||| ||| | ||||| Sbjct 274131 ATGAAAGACGATTCCATTGAAGGTATTTATGATTCATTAAAAGAATGTGCCATGATTTCC 274072 Query 110598 AAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657 || | |||| || ||||| | || ||||| | ||||| || | || | | || Sbjct 274071 AAGACTGCTGGTGGTATTGGGTTGCATATTCATAACATTCGTTCTACGGGTTCTTACATT 274012 Query 110658 GCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACT 110717 ||| | || ||| |||| | ||| | | |||||| | | || || ||| ||||| Sbjct 274011 GCAGGTACTAATGGTACTTCCAATGGTTTAATCCCAATGGTTCGTGTTTTTAACAACACT 273952 Query 110718 GCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAA 110774 ||| |||||| |||||||||| ||||||| ||| |||| || | ||| | ||| Sbjct 273951 GCACGTTATGTGGATCAAGGTGGCAATAAGAGACCTGGAGCATTCGCCCTTTATTTGGAA 273892 Query 110775 CCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAA 110834 || ||||| |||||||| ||||| ||| | || | | || || || || | ||||| Sbjct 273891 CCATGGCACTCAGATATCTTTGATTTCATTGATATCAGAAAGAACCATGG---TAAAGAA 273835 Query 110835 CAAA---GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGT 110891 ||| | ||| | |||||||| ||| | |||||| | ||||| |||||||||||| Sbjct 273834 GAAATTCGTGCAAGAGATTTATTCCCAGCATTATGGATTCCTGATTTGTTCATGAAACGT 273775 Query 110892 GTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGAT 110951 || || | |||| ||| | ||| | | ||| | |||||||| || | ||| Sbjct 273774 GTCGAAAAGAATGAAGAATGGACACTTTTCTCTCCAAGTGAAGCTCCTGGTTTAGCAGAT 273715 Query 110952 GTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGC 111011 |||||||| |||| |||||| | | |||||| |||||| |||||||| | | Sbjct 273714 GTATATGGTGAAGAATTTGAAAAATTGTACGAACGTTATGAACAAGAAGGCCGTGGTAGA 273655 Query 111012 AAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGA 111071 || |||| ||||||| | | |||| || | ||| ||||| ||||||||| Sbjct 273654 AAGACAATTAGAGCTCAAAAGTTGTGGTATGCCATTTTAGAAGCACAAACTGAAACTGGT 273595 Query 111072 ACTCCTTATATTTTGTATAAAGAT-CATATTAATCGCAAATCTAATCAAATGAATTTAGG 111130 || |||| || | ||||| ||| ||| |||| || ||| |||| ||| | || Sbjct 273594 ACACCTTTCATGCTCTATAAGGATGCAT-GTAATGAAAAGAGTAACCAAAAGAACCTTGG 273536 Query 111131 AACAATTAAGTCTAGTAATTTGTGCTGTG 111159 ||||| ||| ||||| || |||| Sbjct 273535 TGTGATTAAATCTTCCAATTTATGTTGTG 273507 >seq3 Length=1313108 Score = 150 bits (166), Expect = 4e-31 Identities = 463/705 (66%), Gaps = 17/705 (2%) Strand=Plus/Minus Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAAT-TGGCTTCTT 110523 ||||||||| | || || | |||||||||||||| | | | | || | |||| | Sbjct 879431 TATTCATGCATCGCCCACATTGTTTAACGCAGGAAC-AGTTAATCAATATCTTTCTTCCT 879373 Query 110524 GCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTAT-TTATGATGCTCTTAAAGAA 110582 | ||||| | || || || || ||||||||||| || || || || | | | || Sbjct 879372 GTTTTCTAGTTGGTATGAAAGAGGATTCTATTGATGGAATCTTCCGAACAT-TGCATGAT 879314 Query 110583 ACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCA 110642 || |||||||| || || || || |||||||||||| | | | | | || | | Sbjct 879313 ACAGCTCTTATCTCCAAGGCTTCAGGTGGAATTGGTATTTATGCTTCTAACATAAGGGCG 879254 Query 110643 AAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGA 110702 || || || || | | | | || ||| ||| | |||||| | || ||| | | Sbjct 879253 AATGGGGCTTATGTATCGGGATCTAATGGTATTTCTAGTGGACTAATCCCCATGCTTCGT 879194 Query 110703 GTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTT 110759 || ||||| | || || | |||||| | || || || || | | || ||| Sbjct 879193 GTTTTCAATAATACGGCTAGATATGTAGACCAGGGAGGAAACAAGCGTCCAGGTGCATAC 879134 Query 110760 GCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAAT 110819 ||| ||||| ||||| |||||||||||| | ||||| || || || | | ||||| Sbjct 879133 TGTATATATCTGGAACCCTGGCATTCAGATGTTTTTGATTTTTTGCAATTAAGAAAAAAC 879074 Query 110820 CAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTA 110879 || || || ||| ||||| | |||||||| |||| | ||||| ||||||| Sbjct 879073 CATGGTAAGGATGAATTGAGAGCCAGAGATTTATTCATTGCACTATGGATACCAGATTTG 879014 Query 110880 TTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCT 110939 ||||||||||| || || || || ||||||||| | |||| || | || Sbjct 879013 TTCATGAAACGCGTACAGTCTAACGGAGATTGGTCTCTTTTCAGTCCAGATGAAGCACCG 878954 Query 110940 GGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAA 110999 || ||| |||||| || || |||||||| || || || || ||| |||||| || | Sbjct 878953 GGCCTAAGTGATGTCTACGGCAAAGAGTTCGAGGAGCTATATGAACAATATG-AATCCAC 878895 Query 111000 GGCAAGTTTCGCAAACAAA----TTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATC 111055 || | || ||| ||| | |||||| | || |||| |||| || || | Sbjct 878894 GGAA---TTACCAATGAAACGTGTCAAAGCTCAGAAGCTGTGGTCTGAAATTCTACAAGC 878838 Query 111056 ACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGA-TCATATTAATCGCAAATCTA 111114 ||||| ||||| || ||| | ||| | || || || |||| ||| ||||| | Sbjct 878837 CCAAGTAGAAACAGGCGGTCCGTTTATGCTTTACAAGGATTCAT-GTAACTTTAAATCAA 878779 Query 111115 ATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159 |||||| ||||| || || ||||| ||| |||||| ||||||| Sbjct 878778 ATCAAAAAAATTTGGGTACCATTAAATCTTCTAATTTATGCTGTG 878734 Score = 96.9 bits (106), Expect = 8e-15 Identities = 143/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 305287 AATTAATGATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCA 305346 |||| |||| |||| |||||||| | || |||| |||||| ||||| | || Sbjct 785763 AATTGGTGATCTTGTAGAAAGACATTTAGAAGATGGTGATGTGGTTCTTTTCAACCGTCA 785704 Query 305347 ACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAA-AGTATTATCTGGATTGA 305405 ||| || ||||| | | | || || || | || | | ||| | | ||||| | Sbjct 785703 ACCTTCTCTGCACAGATTATCGATTTTGTCACACTATGCCAAGATTCGCCCCTGGAGA-A 785645 Query 305406 CATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAA 305465 | ||| ||||||||| | ||| |||||| ||||||||||| ||||| ||||| ||||||| Sbjct 785644 CCTTTAGATTAAATGAATGTGTTTGTACTCCTTATAATGCAGATTTCGATGGTGATGAAA 785585 Query 305466 TGAATATGCATGTACCTCAA 305485 |||| ||||||| || ||| Sbjct 785584 TGAACTTGCATGTTCCCCAA 785565 >seq7 Length=888749 Score = 122 bits (134), Expect = 2e-22 Identities = 172/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 131765 TTATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAA 131824 |||||| |||| | | || | || |||| | | | || ||||||||||| |||| Sbjct 211264 TTATTTAATGCCATTGAAAACATCCCACCAATCAGAGAAAAGGCAGAATGGGCCATTAGG 211205 Query 131825 TGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAA 131884 |||||||||||||| || || | || |||| | || || ||||| |||||| Sbjct 211204 TGGATTCAAGATGAAGAAGCCCTTTATGCTGAAAGATTAGTCGCATTTGCCGCAGTTGAA 211145 Query 131885 GGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATG 131944 ||||| ||||| ||||| ||||| ||| ||||||||| | |||||| || ||||| Sbjct 211144 GGTATCTTCTTCTCAGGGTCTTTCGCTGCCATCTTTTGGTTGAAGAAGAAGGGTCTGATG 211085 Query 131945 CCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTT 132004 || || || | || || || |||| || | ||||| |||| |||||||| || ||| Sbjct 211084 CCAGGTCTAACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCATACCGACTTT 211025 Query 132005 GC 132006 || Sbjct 211024 GC 211023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812009285972