Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq7 136 3e-27 seq6 87.8 1e-12 >seq7 Length=888749 Score = 136 bits (150), Expect = 3e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | | ||| ||||| || ||||| |||||| || ||||||||||| || Sbjct 736421 CCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGAC 736362 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | |||| |||||||| || || ||||||||||| | ||| || || | || Sbjct 736361 AGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGA 736302 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| ||||| |||||| | || ||||| || | || || |||||||| Sbjct 736301 ATACCTTCCTTGTCCTGAATTTT-AGATTTAACATTATCGATAGTATCAGAAGATTCCAC 736243 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| |||||||| || || ||||| |||||||| |||||| Sbjct 736242 TTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCATA 736194 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| || | || ||||| || |||||| || || || ||||||||||| || Sbjct 735282 ACCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGA 735223 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | |||| |||| ||| ||||| ||||||||||| | ||| ||||| | || Sbjct 735222 CAAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGG 735163 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| || || || | ||| | ||| | ||| || ||||| | Sbjct 735162 AATACCTTCGTTGTCTTGGATCTT-TGACTTAACGTTGTCGATGGTATCAGAAGATTCAA 735104 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || ||||| || || || || || || ||||||||| Sbjct 735103 CCTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCATA 735054 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| || | || ||||| || ||||| || || || ||||||||||| || Sbjct 735966 ACCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGA 735907 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| || |||||||| || |||||||| | | ||| || ||| | || Sbjct 735906 CAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGG 735847 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| || || | | || | ||| | ||| || ||||||| Sbjct 735846 AATACCTTCCTTGTCTTGGATCTT-GGACTTGACGTTGTCGATGGTATCAGAAGATTCCA 735788 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || ||||| |||| || || || || || |||||| Sbjct 735787 CTTCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCATA 735738 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | | || ||||| || ||||| || || || ||||||||||| || Sbjct 735738 ACCACCTCTTAGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGA 735679 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || || | ||| || || ||||||||||| | ||| || ||| | || Sbjct 735678 TAAAGTTCTGCCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGG 735619 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| || || | || || | ||| | || || ||||||| Sbjct 735618 AATGCCTTCTTTGTCCTGGATCTT-AGATTTGACGTTGTCGATAGTATCAGAAGATTCCA 735560 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || ||||| |||| || || || || ||||||||| Sbjct 735559 CTTCCAAAGTGATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCATA 735510 >seq6 Length=915354 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | || ||||| || | ||| || ||||| |||||||| |||| Sbjct 604726 CACCACCTCTCAATCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGG 604785 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | | || |||||||| || || ||||| ||||| | || || || | | Sbjct 604786 ACAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 604845 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||| || ||||| ||| || | | |||| ||| | ||||| ||||| Sbjct 604846 GGATACCCTCCTTGTCCTGAATCTT-GGACTTGACATTGTCAATAGTGTCAGAAGATTCA 604904 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || || ||||| || || || || ||||| |||||||| Sbjct 604905 ACTTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 604954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703791683840