Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq7 140 8e-28 seq6 89.7 1e-12 >seq7 Length=888749 Score = 140 bits (154), Expect = 8e-28 Identities = 155/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGA-ATC 206243 ||||| | || || ||||| |||||||||||||||||| |||||| || |||| | Sbjct 736210 AAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCTGATACTATCGATAAT 736269 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 |||| | ||| ||||| || || ||||| ||| || ||| || ||| | || || Sbjct 736270 GTTAAATCTAAA-ATTCAGGACAAGGAAGGTATTCCTCCTGACCAACAGAGATTGATTTT 736328 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| |||||||| || || ||| || | ||||||||| ||||||||||||| Sbjct 736329 TGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAACATCCAGAAAGAGTC 736388 Query 206364 TACTCTTCACCTTGTTTTGAGACT 206387 |||||| ||| | ||||| ||||| Sbjct 736389 TACTCTGCACTTGGTTTTAAGACT 736412 Score = 118 bits (130), Expect = 3e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || |||||||||||||||||| |||||| || |||| Sbjct 735526 AAGACTCTAACCGGTAAGACCATCACTTTGGAAGTGGAATCTTCTGATACTATCGACAAC 735585 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || || ||||| || || |||||||| ||| || ||| || ||| | || || Sbjct 735586 GTCAAATCTAAGATCCAGGACAAAGAAGGCATTCCTCCAGACCAACAGAGATTGATTTTT 735645 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| | || ||||| || ||||| | ||||||||| ||||||| || ||| Sbjct 735646 GCAGGTAAGCAACTTGAGGATGGCAGAACTTTATCTGATTACAACATCCAGAAGGAATCT 735705 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 ||||||||| | ||| | ||||| Sbjct 735706 ACTCTTCACTTGGTTCTAAGACT 735728 Score = 114 bits (126), Expect = 3e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || |||||| ||||||||||| |||||| || |||| Sbjct 735754 AAGACTCTAACCGGTAAGACTATCACTCTGGAAGTGGAATCTTCTGATACCATCGACAAC 735813 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| || ||||| ||| || ||| || ||||| || || Sbjct 735814 GTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAACAGAGACTAATTTTT 735873 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || || || ||||| || || ||| || | ||||||||| | ||||| || ||| Sbjct 735874 GCTGGTAAACAATTAGAAGACGGTAGAACTCTGTCTGATTACAACATTCAGAAGGAATCT 735933 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 ||||| ||| | || |||||| Sbjct 735934 ACTCTGCACTTGGTCTTGAGA 735954 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || || || ||||||||||| || ||| |||||||| | Sbjct 849487 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGACACCAT 849428 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| ||||||||| || || ||||| || || ||| |||||| | Sbjct 849427 TGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 849368 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 |||||||| || ||||| ||||||||||| || || ||| | || |||||| |||| || Sbjct 849367 AATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCTGACTACAACATCCAAAA 849308 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || |||||| | ||| | ||| | ||| Sbjct 849307 GGAATCTACTTTGCACTTGGTTCTAAGA 849280 >seq6 Length=915354 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || | || || || || || || | ||||| ||| ||||||| Sbjct 604951 CAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATCTTCTGAC 604892 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||||| || || || || || || ||| ||| Sbjct 604891 ACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGACCAACAA 604832 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || ||||| ||||||||||| || || ||| |||| |||||| || Sbjct 604831 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCCGACTACAACATC 604772 Query 206353 CAGAAAGAGTCTAC 206366 || || || || || Sbjct 604771 CAAAAGGAATCCAC 604758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820012611892