Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq7 100 3e-16 seq6 91.5 1e-13 >seq7 Length=888749 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| || || || ||| | ||||| | ||||| ||| | Sbjct 736195 ATGCAAATCTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCT 736254 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||||||||| | || ||| |||||| || || || ||||| || || || || Sbjct 736255 GATACTATCGATAATGTTAAATCTAAAATTCAGGACAAGGAAGGTATTCCTCCTGACCAA 736314 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | |||| | || || ||| | ||||| | ||||| | | |||||||| Sbjct 736315 CAGAGATTGATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAAC 736374 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGA 25402 || || ||||| || || | || || || |||||| | ||||| ||| Sbjct 736375 ATCCAGAAAGAGTCTACTCTGCACTTGGTTTTAAGACTAAGAGGTGGA 736422 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || |||| || ||| | ||||| | |||||||| | | Sbjct 735283 ATGCAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 735342 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || || ||| ||| || || || ||||| || ||||| || Sbjct 735343 GACACCATCGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATTCCACCCGACCAA 735402 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||||| |||| | || || || || ||||||| |||| | ||||||||| Sbjct 735403 CAGAGACTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCAGAACACTATCTGATTACAAT 735462 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || || || ||||| || | || || || ||||| | ||||| || Sbjct 735463 ATCCAGAAGGAATCTACTCTGCACTTGGTTCTAAGACTAAGAGGTGG 735509 >seq6 Length=915354 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| ||||| | ||||| || || || || || || | || || | ||||| ||| | Sbjct 604958 CAAGATGCAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATC 604899 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 || ||||| || | || || || ||| || || |||||||| || || || Sbjct 604898 TTCTGACACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGA 604839 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGAT 25348 || |||||| | || | | || || ||| | ||||||| ||||| |||| ||| Sbjct 604838 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTC--CGAC 604781 Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| || ||||| ||||||||| | || || || ||||||||||||| || Sbjct 604780 TACAACATCCAAAAGGAATCCACCTTGCACTTGGTCCTAAGATTGAGAGGTGG 604728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094110688640