Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq7 122 8e-23 seq6 114 1e-20 >seq7 Length=888749 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568 |||||| | || || || ||||| || | ||| ||| || || ||||||||||| | Sbjct 736422 TCCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGA 736363 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 || |||| |||| |||| |||||||| ||||| ||||| | ||| ||||| | ||| Sbjct 736362 CAGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGG 736303 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 || | ||||||||| ||| ||| | || | | | | | || || ||||||| Sbjct 736302 AATACCTTCCTTGTCC-TGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCA 736244 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | |||| ||||| |||||||| ||||| ||||||||||| || ||||| Sbjct 736243 CTTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 736195 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | ||| ||||| ||||| || | || ||||| || ||||||||||| | | Sbjct 735281 CCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAC 735222 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| |||| ||||| ||||| || ||||| ||||| | ||| || |||| |||| Sbjct 735221 AAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGA 735162 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | || ||||| ||||||| ||| | |||| | | || || ||||| || Sbjct 735161 ATACCTTCGTTGTCTTGGATCTTTGACTT-AACGTTGTCGATGGTATCAGAAGATTCAAC 735103 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| || || || ||||| |||||||| || || || |||||||| Sbjct 735102 CTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 735055 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || || | ||||| || | ||| ||||| || ||||||||||| | Sbjct 735737 CCACCTCTTAGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAT 735678 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| | || || || |||||||| ||||| ||||| | ||| ||||| | |||| Sbjct 735677 AAAGTTCTGCCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGA 735618 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || || |||||| |||| || | || |||| | | || || |||||||| Sbjct 735617 ATGCCTTCTTTGTCCTGGATC-TTAGATTTGACGTTGTCGATAGTATCAGAAGATTCCAC 735559 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| || ||||| || | ||| || || || |||||||| Sbjct 735558 TTCCAAAGTGATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCAT 735511 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | ||| ||||| ||||| || | ||| ||||| |||||||||||||| | | Sbjct 735965 CCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 735906 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| || | || ||||| ||||| || | | ||| ||||| | ||| Sbjct 735905 AGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGA 735846 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||||| |||||| ||| | |||| | | || || |||||||| Sbjct 735845 ATACCTTCCTTGTCTTGGATCTTGGACTTGA-CGTTGTCGATGGTATCAGAAGATTCCAC 735787 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| || ||||| || | ||| || || || || ||||| Sbjct 735786 TTCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 735739 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || || | ||||| || | ||| ||||| || || |||||||| | Sbjct 735509 CCACCTCTTAGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGAT 735450 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| | || |||||||||||||| ||||| |||| | ||| ||||| | ||| Sbjct 735449 AGTGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGA 735390 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||||| |||||| ||| | |||| | | |||||| || || || Sbjct 735389 ATACCTTCCTTGTCCTGAATCTTTGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCGAC 735331 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| |||||||| || | ||| || || || || ||||| Sbjct 735330 TTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 735283 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | ||| || | |||| || | ||| ||||| || ||||||||||| | | Sbjct 736193 CCACCTCTTAATCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGAC 736134 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| | || || || |||||||| ||||| || | | || ||||| | |||| Sbjct 736133 AGGGTTCTGCCATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGA 736074 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||| ||| |||||| ||| | |||| | | |||||| || || || Sbjct 736073 ATACCCTCCTTATCCTGAATCTTTGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCGAC 736015 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| |||||||| || | ||| || || || || ||||| Sbjct 736014 TTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCAT 735967 >seq6 Length=915354 Score = 114 bits (126), Expect = 1e-20 Identities = 171/241 (71%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 35499 TCTCTTTATTTCCACCACGT---AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555 |||||| || ||||||| | || || | ||||| || || || |||||||| | Sbjct 604715 TCTCTTC-TTACCACCACCTCTCAATCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGA 604773 Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615 ||||||| |||| |||||||| | || |||| |||||||| ||||| ||||| | | Sbjct 604774 TGTTGTAGTCGGACAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTT 604833 Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675 | ||||| | || | | |||||||||| ||||| ||| | | | | | |||| Sbjct 604834 GTTGGTCAGGTGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATAGTGT 604893 Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 | ||||| || || | || || || |||||||||||||| || ||||| ||||||| Sbjct 604894 CAGAAGATTCAACTTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCA 604953 Query 35736 T 35736 | Sbjct 604954 T 604954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793306984160