Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1 118 8e-22 >seq1 Length=1544349 Score = 118 bits (130), Expect = 8e-22 Identities = 362/558 (65%), Gaps = 19/558 (3%) Strand=Plus/Minus Query 40749 TGGTTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTGCACATTTGG 40808 ||||| || |||||||||| | | |||||| ||||| || || || | |||||| Sbjct 1390471 TGGTTCATTTCAGGTTGTACTGACGGTAAGAAGTTATCTGAGCAGGGCGTTAAAATTTGG 1390412 Query 40809 AATGCGCACAGTTCTAAAACATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAGGT 40868 | | | | || | | ||| || || || ||||| || || || ||||||| Sbjct 1390411 GAAGGCAATGGATCCAGAGAGTATCTGGATAAAATCGGATTGCACGACAGACGTGAAGGT 1390352 Query 40869 GATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATA-TGACACTAT 40927 || ||||||||||| || || || || | | |||||||||| || ||||| || || | Sbjct 1390351 GACCTTGGTCCTGTCTACGGTTTCCAATGGAGACATTTTGGTGCCAAATACAGAACCTGT 1390292 Query 40928 GTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATACGATTAA 40987 | || |||||||| |||| | |||||||| || || || |||| ||||| Sbjct 1390291 G-ACGACGATTATACTGGACAAGGGTTCGATCAATTGAAGGAGGTGATTGATA-AATTAA 1390234 Query 40988 ATCCGATCCC-GATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATT 41046 | | ||| || || | || || || | |||||||| || | ||| | | Sbjct 1390233 AAAATAACCCATATGATCGGAGAATTATTATGAGTGCGTGGAATCCGCCAGACTTTCCAC 1390174 Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTT---------------T 41091 | |||||||| ||||| ||||| | || | || ||||||||| Sbjct 1390173 TAATGGCATTACCACCATGTCACGTATTTTCACAATTTTACGTTAACTTCCCCAAGGAGG 1390114 Query 41092 GCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCC 41151 |||| | || ||||||||| | ||||||| ||||| |||| ||||| | || || | Sbjct 1390113 GCAAGCCTAAATTGTCATGTCTACTGTATCAGAGATCCTGTGATATGGGGTTGGGAGTTC 1390054 Query 41152 CGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAA 41211 | || ||||| || || || || | || | ||||||||||| || | || | Sbjct 1390053 CATTCAACATTGCATCCTACGCACTTTTGACCAAGATGATTGCACATGTGTGCGATATGG 1389994 Query 41212 AACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGC 41271 ||||| ||||||| | || || | || |||| || || |||| |||| | || Sbjct 1389993 AACCTAGTGAATTCATCCATACAATGGGTGATGCTCACATCTACAAGGATCATGTGGATG 1389934 Query 41272 CGTTAACAGAACAACTGA 41289 | | | ||||||| ||| Sbjct 1389933 CTCTGAAAGAACAATTGA 1389916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455748112260