Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq6 188 9e-43 seq4 105 8e-18 seq7 98.7 1e-15 >seq6 Length=915354 Score = 188 bits (208), Expect = 9e-43 Identities = 849/1320 (64%), Gaps = 44/1320 (3%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||| | |||||| ||||| || ||||| || | |||||||||||||| || || Sbjct 272908 GTACATGTTAGATGTGTAAGGTTCGAAACATTCGTTGTAACCCAAGATTTGTGATGTTGA 272967 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || || ||||| || |||| || | ||| | | ||| | || || |||| || Sbjct 272968 AGCAGTGGGCATAGGGGCCACTAATAATGAGTTTCTTACACCATGTTCTTTAATGCCTTG 273027 Query 110827 CTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884 | | ||||| || || || | || ||| || |||| | ||||| || Sbjct 273028 TCTCAATGGTTCCCAATCCCATAATTCTGAA-GGATTCTTCT-CCCAAAGATCAAATTGT 273085 Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCC 110944 | | |||||||| || ||||| ||| |||| ||| | ||| || | ||| Sbjct 273086 AAAAGACCTTGGGAGATAGGGGAACCTTCATAGGTAGAATAAGTACCGTGAATCTTGGCC 273145 Query 110945 AATTCACA-GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 |||||||| | | | |||| || |||| || || |||||||| || | |||| Sbjct 273146 AATTCACAAGATTGT-TCCAAGGCACCGTGGTAAATAGTTTCAAAAATTTGTTGGTTCAA 273204 Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGAC 111062 || || ||| || ||||||| | || ||| || ||||| || || | | Sbjct 273205 TATTTTTGCCTCAGGAGATTCAAATG-GCAGACGCAACATCATAAAAGTGTCTGCTAACC 273263 Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CT-TTCGCG-CAGTCTCAA 111119 | | |||||| | |||||||||| |||| |||||| || || || || ||| || Sbjct 273264 CATTAACACCAAGTGCAATAGGTCTATGTCTCATATTGGATCTCTTGGCTTCAGG---AA 273320 Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179 | || || | || | |||||||| ||| | ||| |||| | || | || || Sbjct 273321 CTGGGTAGTAGTTACGATCAATGACCTTGTTCAAATTACGTGTAATAGCTTTAGCGACTT 273380 Query 111180 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCT--CTT--CAT-TGAC-ATACTT----- 111228 |||| | ||| || || || | | | | ||| ||| || | |||||| Sbjct 273381 CATGTAATTTGGCAAAACT----GTACCATTGTTCCTTACCATCTGCCGATACTTCCACA 273436 Query 111229 -----TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTAC 111283 ||| | ||||| || || ||||| ||||| || || |||||||| || | ||| Sbjct 273437 CAAGATGGTAATGCGATAGAAGCTAAATTACAAACTGCAGTTTCATCCTTGTCAGAGTAT 273496 Query 111284 TCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTC 111343 || | ||||| |||||| |||||| |||||| || | ||||||||||||||| Sbjct 273497 TCCACGATTTCACAACATAAATTGGAAGATTTAATCACACCAAGGTTCTTTTGGTTACTC 273556 Query 111344 TTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTG 111403 || | || || |||||||| ||||||||| | || || || || || || |||| || Sbjct 273557 TTTTCATTACATGCATCCTTATAGAGCATGAAAGGTGTACCAGTTTCAGTTTGTGCTTCT 273616 Query 111404 AGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGT--TGGCCCGTCCCTCCGCC 111460 | ||| || | ||| ||| | | ||| || | || | | | | || || || Sbjct 273617 AAAATGGCATACCACAACTTTTG-AGCT-CTA-ATTGTCTTTCTACCACGGCCTTCTTGT 273673 Query 111461 TCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCC 111520 || || | ||| | |||||| || ||||| | || | | ||| || || Sbjct 273674 TCATAACGTTCGTACAATTTTTCAAATTCTTCACCATATACATCTGCTAAACCAGGAGCT 273733 Query 111521 TTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCT 111580 | |||| ||||||| | ||||| || | || || || |||||||| | || Sbjct 273734 TCACTTGGAGAGAAAAGTGTCCATTCTTCATTCTTTTCGACACGTTTCATGAACAAATCA 273793 Query 111581 GGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGT 111640 |||||||| | | || || | |||||| ||| ||||| | ||| ||||| | Sbjct 273794 GGAATCCATAATGCTGGGAATAAATCTCTTGCACGAATTTCTTCTTTACCATGGTTCTTT 273853 Query 111641 CGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGAT 111700 | | |||| ||| || | |||||| | ||||||||| || | ||| | |||| | | Sbjct 273854 CTGATATCAATGAAATCAAAGATATCTGAGTGCCATGGTTCCAAATAAAGGGCGAATGCT 273913 Query 111701 CCCTTTC---GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 111757 || || | ||| |||||| ||||| || || ||| |||||| || |||| | Sbjct 273914 CCAGGTCTCTTATTGCCACCTTGATCCACATAACGTGCAGTGTTGTTAAAAACACGAACC 273973 Query 111758 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 111817 ||||| || | ||||| || |||||| || || ||| ||| | | | Sbjct 273974 ATTGGGATTAAACCATTGGAAGTACCATTAGTACCTGCAATGTAAGAACCCGTAGAACGA 274033 Query 111818 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 111877 | | ||| || |||| ||||||||| ||||| ||| || || ||||| || | Sbjct 274034 ATGTTATGAATATGCAACCCAATACCACCAGCAGTCTTGGAAATCATGGCACATTCTTTT 274093 Query 111878 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 111937 | | |||| ||||| | || || || || || | || | |||||| ||| | | Sbjct 274094 AATGAATCATAAATACCTTCAATGGAATCGTCTTTCATCGCCACAAGGAAACAAGATGCC 274153 Query 111938 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 111997 || || || ||| ||||| |||||||| || ||||| | || || ||||| |||||| Sbjct 274154 ATTTGTGGATGTGGAGTACCTGCATTGAAAAGAGTTGGAGAAGCATGGATGAA-ATACCT 274212 >seq4 Length=1229640 Score = 105 bits (116), Expect = 8e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663 || ||| | ||||||||||| || ||||| || || ||| | ||||||||| ||||| Sbjct 1017267 TACGGTAGAGTTGCACCACGTTCAGGTCTTGCCGTAAAGAACGGTATTCAAACCGGTGCT 1017326 Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723 |||||||| ||| || || || |||||||| |||||||| || ||||||||| || Sbjct 1017327 GGTGTTATCGATAGAGATTACACTGGTGAAGTTAAAGTCGTCCTGTTCAATCACACTGAT 1017386 Query 164724 AAAGACTTTGA 164734 || |||||||| Sbjct 1017387 AAGGACTTTGA 1017397 >seq7 Length=888749 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || || | ||| || |||| | |||| | ||| || |||||| |||||| Sbjct 211022 GGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTTAGACC 211081 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 |||||| |||||| ||||||||||||| | || || ||| ||||| ||||||||||| Sbjct 211082 TGGCATCAGACCCTTCTTCTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAAGAAGAT 211141 Query 122778 ACCCTCCAC 122786 ||| || || Sbjct 211142 ACCTTCAAC 211150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031591779200