Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3 100 4e-16 >seq3 Length=1313108 Score = 100 bits (110), Expect = 4e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 || || |||| || |||||||| ||||| | |||||||| || | | ||||||| | Sbjct 878670 GGCAGTGCGACCGAAGCCAGATTGCACACTGCTGTCTCATCTTTGGAACTATACTCTACA 878729 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || ||| || || ||| |||||||| ||||| || ||||||||||| || | Sbjct 878730 ATCTCACAGCATAAATTAGAAGATTTAATGGTACCCAAATTTTTTTGATTTGATTTAAAG 878789 Query 118824 TTACACGCATCCTTGTAAAGCAT 118846 ||||| | ||||||||||||||| Sbjct 878790 TTACATGAATCCTTGTAAAGCAT 878812 Score = 86.0 bits (94), Expect = 8e-12 Identities = 157/227 (69%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 117843 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 117902 || |||||||| || || || ||||| ||||| |||| | |||||| || ||| || Sbjct 877785 TAATACATCCCAGTTTTCAGTCCCTGTTTCCATGCATGAAAATGCATACTGGTCAATTTT 877844 Query 117903 GAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 117962 | |||||||| |||||| || || | |||||| |||||||||||||| || | Sbjct 877845 CCCATTGTTGGACTCCTCATGAAAAGATTTAAACTTTGTGATTGATCGATGAATGGTGCT 877904 Query 117963 CGATCCGCCGCCATATCAATCACATCCTTCATCT---TGATTTCCCACACAGTCCTGTAG 118019 | ||| ||||||||||| | | || ||| ||| ||||| || ||| ||||| Sbjct 877905 CTATCACGAGCCATATCAAT--TAGCGGTC-TCTGTGGGATCTCCCAAACGGTCTTGTAG 877961 Query 118020 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCC 118066 | || || || ||| || | | | || ||||||| |||||| Sbjct 877962 ATCTTTTTTATCCAATCCGGTAAACCTTGGACGTTTTGGACGGATCC 878008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434798017120