Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq6 214 2e-50 seq9 93.3 5e-14 >seq6 Length=915354 Score = 214 bits (236), Expect = 2e-50 Identities = 1092/1717 (64%), Gaps = 47/1717 (3%) Strand=Plus/Minus Query 104252 GGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGG 104310 ||||||||||| ||||| || | |||| | || || ||| | |||||| ||| Sbjct 274269 GGTATTCATGGTGAAGATATCAAATCTGCGATCGAAACTTACAATTTGATGTCATTGAGG 274210 Query 104311 TATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTC 104370 ||| ||||| || || | ||||| || |||||||| ||||| ||| || |||||| | Sbjct 274209 TAT-TTCATCCATGCTTCTCCAACTCTTTTCAATGCAGGTACTCCACATCCACAAATGGC 274151 Query 104371 CAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTAC 104430 ||| |||||| | || | || || || || || | ||||| |||| | | | Sbjct 274150 ATCTTGTTTCCTTGTGGCGATGAAAGACGATTCCATTGAAGGTATTTATGATTCATTAAA 274091 Query 104431 GGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAG 104490 || ||||| || || ||| ||||| ||||||||| |||| || ||| | | | Sbjct 274090 AGAATGTGCCATGATTTCCAAGACTGCTGGTGGTATTGGGTTGCATATTCATAACATTCG 274031 Query 104491 AGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCT 104550 | | ||| ||| || || |||||| || ||||| | || |||||| | Sbjct 274030 TTCTACGGGTTCTTACATTGCAGGTACTAATGGTACTTCCAATGGTTTAATCCCAATGGT 273971 Query 104551 TCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTC---GAAAGGGATC 104607 ||| || |||||| ||| || || ||||| |||||| ||| | || ||| | Sbjct 273970 TCGTGTTTTTAACAACACTGCACGTTATGTGGATCAAGGTGGCAATAAGAGACCTGGAGC 273911 Query 104608 TATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCT 104667 |||| | ||| | || ||||||||| | |||||| | || ||| |||| | | Sbjct 273910 ATTCGCCCTTTATTTGGAACCATGGCACTCAGATATCTTTGATTTCATTGATATCAGAAA 273851 Query 104668 CAACCAAGGTGACGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAG 104726 ||||| ||| | || || || ||| | ||| | ||| | || | |||||||| | Sbjct 273850 GAACCATGGTAAAGAAGAAATTCG-TGCAAGAGATTTATTCCCAGCATTATGGATTCCTG 273792 Query 104727 ATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGG 104786 || | |||||||| | || || ||| || | ||| | || || | |||| | | Sbjct 273791 ATTTGTTCATGAAACGTGTCGAAAAGAATGAAGAATGGACACTTTTCTCTCCAAGTGAAG 273732 Query 104787 CACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGG 104846 | |||||| | | |||| ||||| || |||||| | ||| | || || Sbjct 273731 CTCCTGGTTTAGCAGATGTATATGGTGAAGAATTTGAAAAATTGTACGAACGTTATGAAC 273672 Query 104847 AAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGT 104906 ||||||| || | | ||| | |||| | ||||| | || ||| | | Sbjct 273671 AAGAAGGCCGTGGTAGAAAGACAATTAGAGCTCAAAAGTTGTGGTATGCCATTTTAGAAG 273612 Query 104907 CTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTA 104966 | ||||| || ||||||||||| | |||||| || || || || ||||| ||||||||| Sbjct 273611 CACAAACTGAAACTGGTACACCTTTCATGCTCTATAAGGATGCATGTAATGAAAAGAGTA 273552 Query 104967 ATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTA 105026 | |||||||| | |||||||| || ||||||| | ||| |||||| |||||| Sbjct 273551 ACCAAAAGAACCTTGGTGTGATTAAATCTTCCAATTTATGTTGTGAAATCGTGGAATACT 273492 Query 105027 CAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGG 105086 | ||||| ||||| || || || ||||| | || || ||||| | || | ||||| Sbjct 273491 CTGACAAGGATGAAACTGCAGTTTGTAATTTAGCTTCTATCGCATTACCATCTTGTGTGG 273432 Query 105087 ----ATC--CAGAGACAAAG--ACATTTG----ATTATGAAAAACTCCACGAAGTTACGA 105134 ||| |||| ||| ||| | | || || ||| | || ||||| | | Sbjct 273431 AAGTATCGGCAGATGGTAAGGAACAATGGTACAGTTTTGCCAAATTACATGAAGTCGCTA 273372 Query 105135 AAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTG 105194 || || | || || | |||| || |||||| | || | ||||| ||| | Sbjct 273371 AAGCTATTACACGTAATTTGAACAAGGTCATTGATCGTAACTACTACCCAGTTCCTGAAG 273312 Query 105195 CTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATG 105254 | | ||| ||||||||||| | || |||| || |||||| | || | || || Sbjct 273311 CCAAGAGATCCAATATGAGACATAGACCTATTGCACTTGGTGTTAATGGGTTAGCAGACA 273252 Query 105255 TATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCA 105314 || || | | || | ||||||| || || || || | | || | | Sbjct 273251 CTTTTATGATGTTGCGTCTGCCATTTGAATCTCCTGAGGCAAAAATATTGAACCAACAAA 273192 Query 105315 TATTTGAGACCATGTATCACGCCGCTCTTGAGGCGA-GTTCAGAGTTGGCAGAGGTTGAT 105373 | ||||| || || || |||| || |||| | | || || ||||| || || | Sbjct 273191 TTTTTGAAACTATTTACCACGGTGC-CTTGGAACAATCTTGTGAATTGGCCAAGATTCAC 273133 Query 105374 GGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATG 105433 ||| | ||| |||| ||| ||||| || || ||||| | | ||||||||| | Sbjct 273132 GGTACTTATTCTACCTATGAAGGTTCCCCTATCTCCCAAGGTCTTTTACAATTTGATCTT 273073 Query 105434 TGGGAAGGTGAGACC--AAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGG 105491 |||| || || || || | | | || |||||| | | | || |||| || | Sbjct 273072 TGGG-AGAAGAATCCTTCAGAATTA-TGGGATTGGGAACCATTGAGACAAGGCATTAAAG 273015 Query 105492 AGAAGGGTCTTCGTAACAGTCTCCTCA----TGGCTCCAATGCCAACAGCCTCCACCGCA 105547 | | ||| |||| | ||| | | |||| || ||||| || || || || || Sbjct 273014 AACATGGT----GTAAGAAACTCATTATTAGTGGCCCCTATGCCCACTGCTTCAACATCA 272959 Query 105548 CAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAG 105606 |||||||||||| | || ||||| || ||||| ||||| | ||||| || ||| | | Sbjct 272958 CAAATCTTGGGTTACAACGAATGTTTCGAACCTTACACATCTAACATGTACTCT-CGTCG 272900 Query 105607 AACCCTCGCGGGAGAGTTTGTGATTGTCAA--CAAGCATCTCGTGGATGACCTCAAAGAG 105664 | | || || || ||||| || || | | | | | || | ||| Sbjct 272899 TGTTTTATCTGGTGAATTCCAAATTGTTAATCCATACTTGT--TAAAGGATTTGGTAGAT 272842 Query 105665 ATTGGTCTCTGG--TCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTC 105722 | ||| | ||| | ||| |||||| | | || | | | ||||||||||| Sbjct 272841 TTAGGTATTTGGGATGAAAG--TATGAAACAACAAATCATTACTGATAATGGTTCCATTC 272784 Query 105723 AAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAA--T 105780 | || ||| |||||||| | ||||| || | |||||| || || ||||||| | Sbjct 272783 AGAACATTCCAAATATTCCACAAGAAATCAAAGATTTGTACAAGACGGTGTGGGAAATTT 272724 Query 105781 CAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCA 105840 | | || |||| | |||||||| || ||||||| | |||||||||||| ||| Sbjct 272723 CTCAAAGA--CATGTTCTAGACATGGCTGCTGATCGTGCTGTGTTCATTGATCAATCTCA 272666 Query 105841 AAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTA 105900 ||||| || |||| || || ||| || | | ||||||| | || Sbjct 272665 TTCCTTGAATATCCACATGCGTGCCCCCACAATGGGTAAATTAACAAGTATGCACTTCTA 272606 Query 105901 CAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 105937 | ||||||||||||||||||| || || ||||| ||| Sbjct 272605 CGGTTGGAAGAAGGGTCTCAAGACTGGTATGTACTAC 272569 >seq9 Length=446282 Score = 93.3 bits (102), Expect = 5e-14 Identities = 264/390 (68%), Gaps = 23/390 (6%) Strand=Plus/Plus Query 9614 AAACCATCCATCTCTGTCAAAAG---TTGGTTAATAGTTTGTTCCCGTTCATCATTCGC- 9669 |||||||||||||| || ||| |||||| | ||| | ||| | ||| ||||| || Sbjct 223167 AAACCATCCATCTC---CACAAGCAATTGGTTTAAAGTGTTTTCTCTTTCGTCATTAGCA 223223 Query 9670 --TGGCATACCACCAGCACTGCGTTGCTTTCCC-ACGGCATCAATCTCATCAATGAAGAC 9726 || | | ||| ||| | ||||| || | ||||||||| ||||||| ||||| Sbjct 223224 CCTGAAAAATTACCCTT-CTGTCTAGCTTTACCGATGGCATCAATTTCATCAACGAAGAT 223282 Query 9727 GATGCATGGTTGATTTTCGCGAGC-GACTTCAAAGAGATCCCGTACACGCTTG--GCGCC 9783 ||| |||| ||| || | ||| | ||| ||| || |||| || || |||| || || Sbjct 223283 CATGGATGGCGCATTCTCCCTAGCAGTCTTGAAA-AGGTCCC-TA-ACTCTTGAGGCACC 223339 Query 9784 CACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGAT-GAAGGGGACATTAG 9842 |||||||||||||| |||||||| | | | ||| | || |||||| ||| || Sbjct 223340 AACACCAACAAACATTTCCACAAATTCAGAACCAGAA-ACGAAATAGAAGGGAACACCAG 223398 Query 9843 ATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGA 9902 |||||| ||| | || || | | |||||||| |||||||| ||| | || | Sbjct 223399 CTTCACCAGCAGTTGCCTTAGCCAATAATGTCTTACCAGTACCTGGTGCACCTGATAGAA 223458 Query 9903 GGGCACCTCGTGGAATCTTGGCGCC--ACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAA 9960 ||||| | ||| || || || || |||| | || || ||||| || | ||| Sbjct 223459 TAGCACCCCTTGGGATTTTAGCCCCCATCTTCTCA--TACCTAGAAGGTTCTTTCAAAAA 223516 Query 9961 ATCCACAATTTCTTCCAATTCATCTTTGGC 9990 ||||| || || | ||| |||||||| Sbjct 223517 GCTCACAAACTCCTCAATTTCTTCTTTGGC 223546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260420880480