Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq7 98.7 1e-15 seq6 93.3 5e-14 >seq7 Length=888749 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| || |||| | ||||| ||||||| |||||||| || || || | || || Sbjct 211022 GGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTTAGACC 211081 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 ||||| || || |||||||||||||||||||||| ||| || || ||||||||| Sbjct 211082 TGGCATCAGACCCTTCTTCTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAAGAAGAT 211141 Query 74870 GCCTTCGACACACGCAAAGGCGAC 74893 ||||| || ||||| ||||| Sbjct 211142 ACCTTCAACTGCGGCAAATGCGAC 211165 >seq6 Length=915354 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAG-TCTGATTGACATGAGT 55786 |||| || | ||| |||||||||||| ||| | || |||| | | | |||||| | Sbjct 272756 TCAAAGATTTGTACAAGACGGTGTGGGAAATTTCTCA-AAGACATGTTCTAGACATGGCT 272698 Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 |||||||||| || || ||| || || || || || |||| ||| |||| || Sbjct 272697 GCTGATCGTGCTGTGTTCATTGATCAATCTCATTCCTTGAATATCCACATGCGTGCCCCC 272638 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 || ||| || || | |||||||| ||||| ||||||||||| |||||||| ||| Sbjct 272637 ACAATGGGTAAATTAACAAGTATGCACTTCTACGGTTGGAAGAAGGGTCTCAAGACTGGT 272578 Query 55907 ATGTACTA 55914 |||||||| Sbjct 272577 ATGTACTA 272570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215644309600