Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq7 116 2e-21 >seq7 Length=888749 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | || ||||| || ||||| ||| || || ||||| ||||| || Sbjct 736421 CCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGAC 736362 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| ||||||| | ||| ||||| ||||| || || | ||||||||| || || Sbjct 736361 AGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGA 736302 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||| ||| | |||||| || || || || ||||| Sbjct 736301 ATACCTTCCTTGTCC-TGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCAC 736243 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || |||||||| || || ||||||||||| || ||||| Sbjct 736242 TTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 736195 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||| ||||| || |||||| ||||| || ||||| ||||| || Sbjct 735281 CCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAC 735222 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| ||||||| ||||| || || ||||| || || | |||||| ||||| || Sbjct 735221 AAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGA 735162 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | || || |||||| ||||||| | |||||| | || || || || || Sbjct 735161 ATACCTTCGTTGTCTTGGATCTTT-GACTTAACGTTGTCGATGGTATCAGAAGATTCAAC 735103 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || || ||||| || || || || || ||||||||||| Sbjct 735102 CTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 735055 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | | ||||| || ||||| ||||| || ||||| ||||| || Sbjct 735737 CCACCTCTTAGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAT 735678 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | || |||||||| ||||| ||||| || || | ||||||||| || || Sbjct 735677 AAAGTTCTGCCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGA 735618 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | || || ||||| |||||| | ||| ||| | || || || ||||| Sbjct 735617 ATGCCTTCTTTGTCCTGGATCTTA-GATTTGACGTTGTCGATAGTATCAGAAGATTCCAC 735559 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || |||||||||| || || || ||||||||||| Sbjct 735558 TTCCAAAGTGATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCAT 735511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729400540116