Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08]
52 sequences; 10,081,862 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq7 168 2e-36
seq6 152 1e-31
seq3 96.9 8e-15
>seq7
Length=888749
Score = 168 bits (186), Expect = 2e-36
Identities = 168/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
||||| || || | ||| ||||| ||||| || |||| ||||||||| | | |||||
Sbjct 735500 AGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGTGTTCTG 735441
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|||||||| |||||||| ||||| || || |||| ||||||||||| ||||||||||||
Sbjct 735440 CCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACCTTCC 735381
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| || |||||| ||| || ||||||||||| || | || || ||||| |||
Sbjct 735380 TTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTG 735321
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || || || | ||| || | ||| | ||||||
Sbjct 735320 ATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 735283
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| ||||||||||| || |||| |||||||| | ||||||||| ||
Sbjct 735270 TCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGACAAAGTTCTACC 735211
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| || ||||| ||||| || || | || ||||| || || ||||||||||| ||
Sbjct 735210 GTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGAATACCTTCGTT 735151
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||||||||||| ||| || |||||||| || || | ||| || || || || ||
Sbjct 735150 GTCTTGGATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCAACCTCCAAGGTAAT 735091
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || |||||||| || | ||| | |||||
Sbjct 735090 AGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 735055
Score = 159 bits (176), Expect = 8e-34
Identities = 156/201 (78%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| || || | ||| | ||| ||||| ||||||| ||||| || | ||| ||||| ||
Sbjct 849280 TCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGTTCTACC 849339
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||||||||| | || ||||||||| || || |||||||||||
Sbjct 849340 ATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 849399
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||| || |||||| ||| || || |||||||| |||| ||| || || || |||||
Sbjct 849400 GTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGAT 849459
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
||||| || |||||||| ||
Sbjct 849460 GGTCTTACCAGTCAAAGTCTT 849480
Score = 156 bits (172), Expect = 1e-32
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| ||||| ||||| || || | |||||||| | || |||||| ||
Sbjct 735954 TCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGAGTTCTACC 735895
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||||| || || ||||| || || |||| |||||||| || ||||||||||||||
Sbjct 735894 GTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGAATACCTTCCTT 735835
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| || |||||||| || || | |||||| || | |||||
Sbjct 735834 GTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACTTCCAGAGTGAT 735775
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || | ||| || | ||| | ||||||
Sbjct 735774 AGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 735739
Score = 156 bits (172), Expect = 1e-32
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| || || ||||| ||||| ||||| || |||| |||||||| | || ||||| ||
Sbjct 736182 TCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCC 736123
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||| || || ||||| ||||| ||||| |||| ||||||||| || |||||||| |||||
Sbjct 736122 ATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTT 736063
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|| || |||||| ||| || ||||||||||| || | || || ||||| |||||
Sbjct 736062 ATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGAT 736003
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || || | ||| || | ||| | ||||||
Sbjct 736002 AGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCAT 735967
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
||||| | || | ||| ||||| || ||||| |||| |||||||| | || ||||||
Sbjct 736412 AGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTA 736353
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| ||||| | ||||| || || || || | || |||||||| || ||||||||||||
Sbjct 736352 CCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCC 736293
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| || || || || ||| ||||| || || || | |||||| || || |||
Sbjct 736292 TTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTG 736233
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || || ||||| ||||| | || | ||||||
Sbjct 736232 ATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 736195
>seq6
Length=915354
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| ||||| | ||| | |||||||| ||||||| ||||| |||| ||| ||||| ||
Sbjct 604739 TCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 604798
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||| ||||| | || ||||||||| || || ||||| |||||
Sbjct 604799 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 604858
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||| || ||||| ||| ||| || || ||||| || | ||| || |||| || ||
Sbjct 604859 GTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 604918
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||||||||| || | || | ||||| ||
Sbjct 604919 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 604957
>seq3
Length=1313108
Score = 96.9 bits (106), Expect = 8e-15
Identities = 85/106 (80%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || ||||| || || || |||||||| || | ||||||
Sbjct 1053257 GAAAATTTGACCATCGGTAATGGAAATAACGTTAGTTGGAATATAAGCGGAGATATCACC 1053316
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCA 4575
|||| ||||||| || || ||||||||||| || ||| |||||
Sbjct 1053317 ACCTTGGGTTTCGATGACTGGCAAGGCTGTTAGGGAACCAGCACCA 1053362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530405476088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |