Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08]
52 sequences; 10,081,862 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq7 125 2e-23
seq6 102 2e-16
>seq7
Length=888749
Score = 125 bits (138), Expect = 2e-23
Identities = 167/231 (72%), Gaps = 1/231 (0%)
Strand=Plus/Minus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| || || || || |||||||| || || |||||||||||||| | | ||||| ||
Sbjct 736182 TCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCC 736123
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
||| || || || || || ||||| || || || ||||| | | || || |||||
Sbjct 736122 ATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTT 736063
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|| ||||| ||| ||||| | || | | |||| ||| ||| ||||| | ||| ||
Sbjct 736062 ATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGAT 736003
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
|||||| || || |||||||| ||||||| ||||| ||| |||| |||
Sbjct 736002 AGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCATACCACCTCTTAATCT 735952
Score = 111 bits (122), Expect = 4e-19
Identities = 167/236 (71%), Gaps = 1/236 (0%)
Strand=Plus/Minus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| ||||| || || | ||||||||||| || || |||||||||||||| | |||||||
Sbjct 735731 CTTAGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAGTT 735672
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| ||||| || || || || || || || | ||||| ||||| | | || |||
Sbjct 735671 CTGCCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATGCCT 735612
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
|| || || || || || |||||| | || | | || ||| || ||||| | |
Sbjct 735611 TCTTTGTCCTGGATCTTAGATTTGACGTTGTCGATAGTATCAGAAGATTCCACTTCCAAA 735552
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
|| || || || || || |||||||| ||||| | |||||| ||| |||| |||
Sbjct 735551 GTGATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCATACCACCTCTTAGTCT 735496
Score = 111 bits (122), Expect = 4e-19
Identities = 160/223 (72%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || |||||||| || || || ||||||||||| | | |||||| || |||||||
Sbjct 735945 CAAG-TGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGAGTTCTACCGTCTTCTA 735887
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
||| || || || || || ||||| ||||| | | || |||||||| ||||| |
Sbjct 735886 ATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGAATACCTTCCTTGTCTTGGA 735827
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||||| | || | | | || ||| || ||||| ||||| ||||| || |
Sbjct 735826 TCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACTTCCAGAGTGATAGTCTTAC 735767
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
| || |||||||| ||||| | ||||| ||| |||| |||
Sbjct 735766 CGGTTAGAGTCTTAACGAAAATTTGCATACCACCTCTTAGTCT 735724
Score = 102 bits (112), Expect = 2e-16
Identities = 158/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || |||||||||||||| |||||||||||||| | | |||||| || ||||| |
Sbjct 736401 CAAG-TGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTACCGTCTTCCA 736343
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || || || | ||||| ||||| | | || |||||||| || ||||
Sbjct 736342 ATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGAA 736283
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
|||| ||| ||| | || | | || ||| || ||||| | ||| || ||||| |
Sbjct 736282 TTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGTTTTAC 736223
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
| || | || ||||| |||| ||||| ||| |||| |||
Sbjct 736222 CAGTCAAGGTTTTCACAAAGATTTGCATACCACCTCTTAATCT 736180
Score = 100 bits (110), Expect = 7e-16
Identities = 150/210 (71%), Gaps = 5/210 (2%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||||||| || || || |||||||||||||| | |||||||| || ||||| |
Sbjct 735261 CAAG-TGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGACAAAGTTCTACCGTCTTCCA 735203
Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
| ||||| || || || || | ||||| || |||| | || ||||| || |||||
Sbjct 735202 GTTGCTTT--CCAGCAAAAATCAATCTCTGTTGATCCGGAGGAATACCTTCGTTGTCTTG 735145
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|| ||| || || | || | | | || ||| || || || | |||||||| ||
Sbjct 735144 GATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCAACCTCCAAGGTAATAGTCTT 735085
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || | |||||| ||||| | ||||||
Sbjct 735084 ACCAGTCAAAGTCTTAACGAAAATCTGCAT 735055
Score = 89.7 bits (98), Expect = 1e-12
Identities = 140/199 (70%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | |||||| || |||||||||||||| || | || ||||| |||||||| |
Sbjct 849289 CAAG-TGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGTTCTACCATCTTCCA 849347
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || |||||||| | || || ||||| | | ||| |||||||| || ||||
Sbjct 849348 ATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCCTGAA 849407
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||| ||||| | || | | |||| || || || || | ||| || || || |
Sbjct 849408 TCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGATGGTCTTAC 849467
Query 152077 CCGTGAGAGTCTTCACGAA 152095
| || | |||||| || ||
Sbjct 849468 CAGTCAAAGTCTTGACAAA 849486
>seq6
Length=915354
Score = 102 bits (112), Expect = 2e-16
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| ||||| | || | || || || |||||||||||||| |||| || ||||| ||
Sbjct 604739 TCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 604798
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|||||| | || || || ||||| | || || ||||| | | ||| || |||||
Sbjct 604799 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 604858
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|| ||||| || |||||| | || | |||| ||| || ||||| || |||||
Sbjct 604859 GTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 604918
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || ||||| | |||||| || || | |||||| ||
Sbjct 604919 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 604957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820031266892
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |