Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq6 172 1e-37 seq7 161 2e-34 >seq6 Length=915354 Score = 172 bits (190), Expect = 1e-37 Identities = 179/232 (77%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 |||||| | || | || |||| || || ||| ||| ||||||||||||||||| | Sbjct 604727 ACCACCTCTCAATCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGA 604786 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || | ||||| || | ||| || || ||||||||||| | |||||||||| | Sbjct 604787 CAAG-GTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 604845 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | |||||||||||||| || ||||| | || || | || |||||||| |||| ||| | Sbjct 604846 GGATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 604905 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 |||| || || || |||||||||||||||||||| || || |||||||| || Sbjct 604906 CTTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 604957 >seq7 Length=888749 Score = 161 bits (178), Expect = 2e-34 Identities = 151/192 (79%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| || ||||||||||| |||| | || | ||||||||| ||||| || || ||||| Sbjct 735702 TTCCTTCTGGATGTTGTAATCAGATAAAGTTCTGCCATCCTCAAGTTGCTTACCTGCAAA 735643 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | |||||||| ||||| || || ||||| |||||||| | ||| ||| | Sbjct 735642 AATCAATCTCTGTTGGTCTGGAGGAATGCCTTCTTTGTCCTGGATCTTAGATTTGACGTT 735583 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 |||||||| || |||| ||| ||||| | |||||| |||||||| || | ||||||||| Sbjct 735582 GTCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGTCTTACCGGTTAGAGTCTTAAC 735523 Query 283088 GAATATCTGCAT 283099 ||| |||||||| Sbjct 735522 GAAAATCTGCAT 735511 Score = 158 bits (174), Expect = 3e-33 Identities = 150/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| || ||||||||||| |||| || || | ||||||||| ||||| || || ||||| Sbjct 736158 TTCCTTCTGGATGTTGTAATCAGACAGGGTTCTGCCATCCTCAAGTTGCTTACCAGCAAA 736099 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | ||||||||| |||||||||||||| || || ||||||| || ||| | Sbjct 736098 GATTAGTCTTTGTTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTTTGACTTGACGTT 736039 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| ||||| |||| |||||||| | |||||| || ||||| || | |||||| || Sbjct 736038 GTCGATGGTGTCGGAAGACTCGACTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGAC 735979 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 735978 GAAGATTTGCAT 735967 Score = 149 bits (164), Expect = 1e-30 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| || || |||||||| |||| || || | || || |||| |||||| || ||||| Sbjct 735930 TTCCTTCTGAATGTTGTAATCAGACAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAA 735871 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || | | |||||||| |||||||| ||||||||||||||||| | || ||| | Sbjct 735870 AATTAGTCTCTGTTGGTCTGGGGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTT 735811 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| || || |||| ||| ||||| |||||||| |||||||| || | ||||||||| Sbjct 735810 GTCGATGGTATCAGAAGATTCCACTTCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAAC 735751 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 735750 GAAAATTTGCAT 735739 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | || |||| || || || ||| ||||||||||||||||||| Sbjct 849268 ACCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGA 849327 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | ||| | ||||| || | ||| || || || ||||| || | |||||||||| || Sbjct 849328 CAACGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGG 849387 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| |||||||| || ||||||| || ||| | || || ||||| || | |||||| Sbjct 849388 GATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGAC 849447 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || | |||||| |||||||| ||||||||||| || || Sbjct 849448 CTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 849486 Score = 143 bits (158), Expect = 6e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| || ||||||||||| |||| | || | || || || ||||| || || ||||| Sbjct 735246 TTCCTTCTGGATGTTGTAATCAGACAAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAA 735187 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | ||||| || |||||||| || |||||||||||||||| || ||| | Sbjct 735186 AATCAATCTCTGTTGATCCGGAGGAATACCTTCGTTGTCTTGGATCTTTGACTTAACGTT 735127 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| || || |||| ||| || || | || || |||||||| |||||||||||||| Sbjct 735126 GTCGATGGTATCAGAAGATTCAACCTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAAC 735067 Query 283088 GAATATCTGCAT 283099 ||| |||||||| Sbjct 735066 GAAAATCTGCAT 735055 Score = 138 bits (152), Expect = 2e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| ||||||||||| |||| || || | || || || | ||| || || ||||| Sbjct 736385 TCTTTCTGGATGTTGTAATCAGACAGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAA 736326 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | ||||||||| |||||||| |||||||| || || || | ||| || || Sbjct 736325 ATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGAATTTTAGATTTAACATTA 736266 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 |||||||| || |||| ||| ||||| | |||||| || ||||| ||||| || || || Sbjct 736265 TCGATAGTATCAGAAGATTCCACTTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACA 736206 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 736205 AAGATTTGCAT 736195 Score = 96.9 bits (106), Expect = 7e-15 Identities = 290/436 (67%), Gaps = 10/436 (2%) Strand=Plus/Minus Query 229980 GTTGAGGGTATTCTGTTCTCCGGGAGTTTCTGCGCCATCTTTTGGCTACGCAACAAGGGC 230039 ||||| ||||| | ||||| ||| |||| |||||||||||| | || ||||| Sbjct 211150 GTTGAAGGTATCTTCTTCTCAGGGTCTTTCGCTGCCATCTTTTGGTTGAAGAAGAAGGGT 211091 Query 230040 GTCATGCCCGGGCTCGGTCTGTCGAACGAATTCATCAGCAGGGACGAAGGTCTTCACCAG 230099 | ||||| || || | || |||||||| || |||| ||||||||| | || | Sbjct 211090 CTGATGCCAGGTCTAACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCA-TAC 211032 Query 230100 CAATTTGGCGAGGTCTTGTATTCG--AAGCTAAATAACAAACTACCTTTCGAAACGGTGA 230157 | | || || |||| |||||| | | ||| ||| || | | || | ||| Sbjct 211031 CGACTTTGC-CTGTCTATTATTCGCTCACTTGAATCACAGACCAAGTCCAGATATTGTGG 210973 Query 230158 AACAAATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTG-CGACGCTAT-TCC 230215 || | || | || |||| ||| ||| |||||| ||| | |||| || ||| | || Sbjct 210972 AAAAGATTATTACTGAAGCTGTTTCAATTGAAAA-GAGATACTTTGAAGATGCTCTCCCC 210914 Query 230216 TTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGA 230275 || | ||| | |||||||| || | || ||| ||||| |||||||||| || || Sbjct 210913 GTGGC-TCTGCTGGGCATGAACGCCGCGCTAATGAACCAATACGTCGAATTCGTTGCCGA 210855 Query 230276 TCGTATTTTCGTGGCGCTAGGGTACGAGAAAGT-GTATAACTCCAAGAACCCCTTCGCTT 230334 | || | ||||| || || |||| ||||| || || || || || |||| | Sbjct 210854 CAGACTTCTAGTGGCTCTTGGTAACGA-AAAGTACTACAATGTCACAAATCCATTCGACT 210796 Query 230335 TTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATT 230394 ||||||| ||| || || ||| || || || ||||| || ||| | ||| ||||| Sbjct 210795 TTATGGAAAACATCTCTCTAGCGGGTAAGACCAATTTCTTTGAGAAGAGAGTCTCCGATT 210736 Query 230395 ATCAAAGGCCCGGTGT 230410 | |||| | | ||||| Sbjct 210735 ACCAAAAGGCTGGTGT 210720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738502610008