Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq7 129 4e-25 seq6 91.5 1e-13 >seq7 Length=888749 Score = 129 bits (142), Expect = 4e-25 Identities = 183/252 (73%), Gaps = 8/252 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | |||||| |||| |||||| ||| ||||| ||||||||||| Sbjct 735288 TTGCATACCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTA 735229 Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 ||| | |||| | |||| ||||| ||||| || ||||| ||||| | ||| ||| Sbjct 735228 ATCAGACAAAGTT--CTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGA 735171 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGC 44280 || | ||| | |||||| || || ||||| || | || ||| | ||||| || | Sbjct 735170 TCCGGAGGAATACCTTCGTTGTCTTGGATCTT-TGACTTAACGTTGTCGATGGTATCAGA 735112 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 ||||| ||||||| ||||| ||||| || || | ||||| ||||| || ||||| || Sbjct 735111 AGATTCAACCTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCATAAT 735052 Query 44341 GTGAA--TGAAA 44350 | || ||||| Sbjct 735051 ATCAAACTGAAA 735040 Score = 107 bits (118), Expect = 1e-18 Identities = 165/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG- 44168 ||| ||||| ||||| || |||| ||| || || ||| || |||||||||||||| | Sbjct 736422 TCCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGA 736363 Query 44169 -CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 ||||| | |||| |||| ||||| || ||||| ||||| | ||| || || | | Sbjct 736362 CAGAGTT--CTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGA 736305 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTC 44286 || | ||||||||| ||| | | || | || || || | || || || | ||||| Sbjct 736304 GGAATACCTTCCTTGTCC-TGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTC 736246 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| |||| || || || || || || | ||| ||||| ||||||||||| Sbjct 736245 CACTTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 736195 Score = 102 bits (112), Expect = 6e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| ||||| | |||| ||| || || ||||| ||||| |||||||| Sbjct 735513 CATACCACCTCTTAGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATC 735454 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| | | || ||||||||||| || ||||| |||| | ||| || || | Sbjct 735453 AGATAGTGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGG 735394 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||||||| ||| ||||| ||| | | | |||||||||| || || Sbjct 735393 TGGAATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTC 735334 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | || || || || || || || ||||| ||||| |||||||| Sbjct 735333 GACTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 735283 Score = 100 bits (110), Expect = 2e-16 Identities = 167/237 (70%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| ||||| | |||| |||||| || ||||| ||||||||||| Sbjct 735744 TTGCATACCACCTCTTAGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTA 735685 Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 ||| | |||| | | || || || ||||| || ||||| ||||| | ||| || Sbjct 735684 ATCAGATAAAGTT--CTGCCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGG 735627 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGC 44280 |||| ||| | ||||| || ||| ||||| | || | ||| | || || || | Sbjct 735626 TCTGGAGGAATGCCTTCTTTGTCCTGGATCTT-AGATTTGACGTTGTCGATAGTATCAGA 735568 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| |||| || || ||||| || || || ||||| ||||| || ||||| Sbjct 735567 AGATTCCACTTCCAAAGTGATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCAT 735511 Score = 100 bits (110), Expect = 2e-16 Identities = 165/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | ||| | |||||||| || || ||||| ||||||||||| Sbjct 736200 TTGCATACCACCTCTTAATCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTA 736141 Query 44164 ATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 ||| | || || || | || || || ||||| || |||||||| | | || || Sbjct 736140 ATCAGACAG--GGTTCTGCCATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGG 736083 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 |||| ||| | ||| ||||| ||| ||||| ||| | | | |||||||||| Sbjct 736082 TCTGGAGGAATACCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAA 736023 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || | || || || || || || || ||||| |||||||||||||| Sbjct 736022 GACTCGACTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCAT 735967 Score = 96.9 bits (106), Expect = 2e-15 Identities = 164/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | |||||| |||| ||| || || ||||| || |||||||| Sbjct 735972 TTGCATACCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTA 735913 Query 44164 ATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 ||| | ||||| | |||| || | || || || ||||| || | | ||| || Sbjct 735912 ATCAGACAGAGTT--CTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGG 735855 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 |||| || | ||||||||| || ||||| ||| | | | ||||| || | Sbjct 735854 TCTGGGGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAA 735795 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| |||| || || ||||| || || || ||||| ||||| |||||||| Sbjct 735794 GATTCCACTTCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 735739 >seq6 Length=915354 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169 || ||||||| ||| | |||| ||| | ||| ||||||||||||||||| |||| | Sbjct 604728 CCACCTCTCAATCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 604787 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 || | | | || |||| ||||| || ||||||||||| | || || || | || Sbjct 604788 AAGGTTCTAC-CATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 604846 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287 | ||| ||||| ||| ||||| ||| || ||| | || ||||| | ||||| Sbjct 604847 GATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGT--CAATAGTGTCAGAAGATTCA 604904 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| ||||| ||||| | ||||| || || || ||||| Sbjct 604905 ACTTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCAT 604954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990171856084