Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08]
52 sequences; 10,081,862 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq7 152 1e-31
seq6 118 3e-21
seq2 111 4e-19
>seq7
Length=888749
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||||| || || ||||| ||||| | || || || || |||
Sbjct 735286 CAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCCGAC 735345
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||||||||||||| ||||| || || || ||||| ||
Sbjct 735346 ACCATCGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATTCCACCCGACCAACAG 735405
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || || || || || ||||| |||||||| || || || | ||||| || ||
Sbjct 735406 AGACTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCAGAACACTATCTGATTACAATATC 735465
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || ||||| || ||||| | ||| | ||||| |||
Sbjct 735466 CAGAAGGAATCTACTCTGCACTTGGTTCTAAGACTAAGA 735504
Score = 147 bits (162), Expect = 5e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || ||||| || || ||||| ||||| | || || || || |||
Sbjct 735970 CAAATCTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCCGAC 736029
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| |||||||||||| || || || || ||||| ||||| |||
Sbjct 736030 ACCATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAACAA 736089
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| || || || || || || ||||| || || || | ||||| ||| ||
Sbjct 736090 AGACTAATCTTTGCTGGTAAGCAACTTGAGGATGGCAGAACCCTGTCTGATTACAACATC 736149
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || ||||| || ||||| || ||| | ||| | |||
Sbjct 736150 CAGAAGGAATCTACTCTGCACCTGGTTCTAAGATTAAGA 736188
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||||| || || || || ||||| || || |||||| || ||
Sbjct 735742 CAAATTTTCGTTAAGACTCTAACCGGTAAGACTATCACTCTGGAAGTGGAATCTTCTGAT 735801
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| || ||||| ||||| || || || ||||| ||
Sbjct 735802 ACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAACAG 735861
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || || || || ||||| | ||||| || || ||||| | ||||| ||| |
Sbjct 735862 AGACTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTGTCTGATTACAACATT 735921
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || ||||| || ||||| | || |||||| | |||
Sbjct 735922 CAGAAGGAATCTACTCTGCACTTGGTCTTGAGATTAAGA 735960
Score = 134 bits (148), Expect = 3e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || ||||| || || || || ||||| | || |||||| || ||
Sbjct 735514 CAGATTTTCGTTAAGACTCTAACCGGTAAGACCATCACTTTGGAAGTGGAATCTTCTGAT 735573
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||||||| ||||| |||||||||||||| || ||||| ||||| ||
Sbjct 735574 ACTATCGACAACGTCAAATCTAAGATCCAGGACAAAGAAGGCATTCCTCCAGACCAACAG 735633
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || || || || || || || ||||| || ||| | | ||||| ||| ||
Sbjct 735634 AGATTGATTTTTGCAGGTAAGCAACTTGAGGATGGCAGAACTTTATCTGATTACAACATC 735693
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || ||||| || || || | ||| | ||||| |||
Sbjct 735694 CAGAAGGAATCTACTCTTCACTTGGTTCTAAGACTAAGA 735732
Score = 134 bits (148), Expect = 3e-26
Identities = 158/214 (74%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||| || || ||| | || || || || ||||| | ||||| ||| ||| ||||||||
Sbjct 849487 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGACACCAT 849428
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
|| |||||||| ||||||||||||||| ||||| ||||| || ||||| ||| || |
Sbjct 849427 TGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 849368
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
|||||||| || || || | |||||||| || || | | || || ||| |||||||
Sbjct 849367 AATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCTGACTACAACATCCAAAA 849308
Query 178109 AGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| || |||| | ||| | ||| | |||
Sbjct 849307 GGAATCTACTTTGCACTTGGTTCTAAGATTGAGA 849274
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || |||||||| | || || ||||| ||||| | || |||||| || ||
Sbjct 736198 CAAATCTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCTGAT 736257
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || ||| || ||||||||||| ||||| || ||||| ||||| ||
Sbjct 736258 ACTATCGATAATGTTAAATCTAAAATTCAGGACAAGGAAGGTATTCCTCCTGACCAACAG 736317
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || || || || || | ||||| || || ||||| | ||||| ||| ||
Sbjct 736318 AGATTGATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAACATC 736377
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||||| || || ||||| | ||||| ||||| |||
Sbjct 736378 CAGAAAGAGTCTACTCTGCACTTGGTTTTAAGACTAAGA 736416
>seq6
Length=915354
Score = 118 bits (130), Expect = 3e-21
Identities = 152/206 (74%), Gaps = 3/206 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || ||| | || || || || || ||||| || || ||| || |||
Sbjct 604951 CAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATCTTCTGAC 604892
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||||||||| || || ||||| || ||||| |||
Sbjct 604891 ACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGACCAACAA 604832
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | ||||| || || || || | |||||||| || || |||| |||| || ||| |
Sbjct 604831 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAAC-CTTGTCCGACTACAACAT 604773
Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128
|||||| ||||| || |||| ||||
Sbjct 604772 CCAAAAGGAATCCACCTTGCA-CTTG 604748
>seq2
Length=1400432
Score = 111 bits (122), Expect = 4e-19
Identities = 315/476 (66%), Gaps = 10/476 (2%)
Strand=Plus/Plus
Query 254468 TCTGCGACTTTTCTCAAATAGTTGTGTCTTTTTTCTTTTCGAAGTCTTTCGAACCGGAGG 254527
||||| || ||||||| |||||||||||||||||| | || || | | | || || | |
Sbjct 491480 TCTGCCACCTTTCTCACATAGTTGTGTCTTTTTTCCTCTCTTAGACGTGCAAAACGCATG 491539
Query 254528 GCTGACTGTCCTCCTCGACCGTGTTTCTTTGGGAGAGACACATCAAAA---GACAAAAGC 254584
|| || || || |||| ||||||||||||||| ||| ||| | |||| | || | |
Sbjct 491540 GCAGATTGACCACCTCTACCGTGTTTCTTTGGTAGATCCAC-TGAAAATTTGTGAAGAAC 491598
Query 254585 GTTGTCCTTGTGCTTCCAGAAAGAGTCGCAAAGAGAG-CCCCTGAGCCATCCACAATAAT 254643
| || || ||| | || ||||| | |||| | | |||||| ||||||| || ||
Sbjct 491599 G--GTTCTAGTGTTACCGGAAAGCGAACCAAACAATGATCCCTGA-CCATCCATAACGAT 491655
Query 254644 AAAGCCGTATGTTTTGTCGTCGTACAAAAGCTCTTTGAGACAATCCGTGTGAAAGACATT 254703
|| ||| || | | ||| | | || || || ||| || || || || ||
Sbjct 491656 GAAACCGAATTTGTCATCGGCTTCCAGCAGTTCGGATAGAACTTCGGTATGGAATTTGTT 491715
Query 254704 ATCACAAGCGTACACTTTTTGGCTTATCGGACGGAAAGGTTCGACGTCGAATGCCACTTT 254763
|||||| || | | | | || || ||||||| | || || | |||||
Sbjct 491716 ATCACACAAATATAGGGATGTGTTGATTGGTTTATAAGGTTCAATATCAAAGGTGACTTT 491775
Query 254764 CTTCTCTTTGCCTTCAGGAAGCATCACTGTC-CCACTAAAAATAACGAGGCCGTTTTCGG 254822
||| || || ||||| | || | | || |||| | ||||| | || ||| |
Sbjct 491776 CTTTTCCTTACCTTCTTCATTGATGA-TATCACCACAGTAGATAACTAACCCATTTGGTG 491834
Query 254823 GGACTTTCGACAAGAGTTTTAGCTTTTGCTGGCATGAAACAATTGCCCCAAGAACGGAGA 254882
| ||||| | | |||||||| ||||| ||| ||| ||| || | |||||| |
Sbjct 491835 GAACTTTAGTGTAAAGTTTTAGTTTTTGTTGGGTGGAAGTAATGGCAGATAAAACGGACA 491894
Query 254883 GCCTGTTTACCCTCGACTTGATATTCGATGCCGTTCCGTGTTCGTTTGTCAACATT 254938
| | |||||| ||||| ||||| || ||||| || || | ||| | ||| ||||||
Sbjct 491895 GACGGTTTACTCTCGATTTGATGTTAGATGCAGTACCATATTCATCTGTTAACATT 491950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730398014088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |