Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq7 152 1e-31 seq6 118 3e-21 seq2 111 4e-19 >seq7 Length=888749 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||||| || || ||||| ||||| | || || || || ||| Sbjct 735286 CAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCCGAC 735345 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||||||||||||| ||||| || || || ||||| || Sbjct 735346 ACCATCGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATTCCACCCGACCAACAG 735405 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| || || || || || ||||| |||||||| || || || | ||||| || || Sbjct 735406 AGACTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCAGAACACTATCTGATTACAATATC 735465 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || ||||| || ||||| | ||| | ||||| ||| Sbjct 735466 CAGAAGGAATCTACTCTGCACTTGGTTCTAAGACTAAGA 735504 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || || ||||| ||||| | || || || || ||| Sbjct 735970 CAAATCTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCCGAC 736029 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||||||| || || || || ||||| ||||| ||| Sbjct 736030 ACCATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAACAA 736089 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || || || || || ||||| || || || | ||||| ||| || Sbjct 736090 AGACTAATCTTTGCTGGTAAGCAACTTGAGGATGGCAGAACCCTGTCTGATTACAACATC 736149 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || ||||| || ||||| || ||| | ||| | ||| Sbjct 736150 CAGAAGGAATCTACTCTGCACCTGGTTCTAAGATTAAGA 736188 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||||| || || || || ||||| || || |||||| || || Sbjct 735742 CAAATTTTCGTTAAGACTCTAACCGGTAAGACTATCACTCTGGAAGTGGAATCTTCTGAT 735801 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| || ||||| ||||| || || || ||||| || Sbjct 735802 ACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAACAG 735861 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| || || || || ||||| | ||||| || || ||||| | ||||| ||| | Sbjct 735862 AGACTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTGTCTGATTACAACATT 735921 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || ||||| || ||||| | || |||||| | ||| Sbjct 735922 CAGAAGGAATCTACTCTGCACTTGGTCTTGAGATTAAGA 735960 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||||| || || || || ||||| | || |||||| || || Sbjct 735514 CAGATTTTCGTTAAGACTCTAACCGGTAAGACCATCACTTTGGAAGTGGAATCTTCTGAT 735573 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||||||| ||||| |||||||||||||| || ||||| ||||| || Sbjct 735574 ACTATCGACAACGTCAAATCTAAGATCCAGGACAAAGAAGGCATTCCTCCAGACCAACAG 735633 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || || || || || || ||||| || ||| | | ||||| ||| || Sbjct 735634 AGATTGATTTTTGCAGGTAAGCAACTTGAGGATGGCAGAACTTTATCTGATTACAACATC 735693 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || ||||| || || || | ||| | ||||| ||| Sbjct 735694 CAGAAGGAATCTACTCTTCACTTGGTTCTAAGACTAAGA 735732 Score = 134 bits (148), Expect = 3e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||| || || ||| | || || || || ||||| | ||||| ||| ||| |||||||| Sbjct 849487 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCTGACACCAT 849428 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 || |||||||| ||||||||||||||| ||||| ||||| || ||||| ||| || | Sbjct 849427 TGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 849368 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||| || || || | |||||||| || || | | || || ||| ||||||| Sbjct 849367 AATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACGTTGTCTGACTACAACATCCAAAA 849308 Query 178109 AGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| || |||| | ||| | ||| | ||| Sbjct 849307 GGAATCTACTTTGCACTTGGTTCTAAGATTGAGA 849274 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || |||||||| | || || ||||| ||||| | || |||||| || || Sbjct 736198 CAAATCTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAAGTGGAATCTTCTGAT 736257 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || ||||||||||| ||||| || ||||| ||||| || Sbjct 736258 ACTATCGATAATGTTAAATCTAAAATTCAGGACAAGGAAGGTATTCCTCCTGACCAACAG 736317 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || || || || | ||||| || || ||||| | ||||| ||| || Sbjct 736318 AGATTGATTTTTGCAGGTAAGCAATTGGAAGACGGTAGAACTCTGTCTGATTACAACATC 736377 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || ||||| || || ||||| | ||||| ||||| ||| Sbjct 736378 CAGAAAGAGTCTACTCTGCACTTGGTTTTAAGACTAAGA 736416 >seq6 Length=915354 Score = 118 bits (130), Expect = 3e-21 Identities = 152/206 (74%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || ||| | || || || || || ||||| || || ||| || ||| Sbjct 604951 CAGATTTTTGTCAAGACTTTGACGGGTAAGACCATTACCCTAGAAGTTGAATCTTCTGAC 604892 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||||||||| || || ||||| || ||||| ||| Sbjct 604891 ACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGACCAACAA 604832 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||| || || || || | |||||||| || || |||| |||| || ||| | Sbjct 604831 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAAC-CTTGTCCGACTACAACAT 604773 Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128 |||||| ||||| || |||| |||| Sbjct 604772 CCAAAAGGAATCCACCTTGCA-CTTG 604748 >seq2 Length=1400432 Score = 111 bits (122), Expect = 4e-19 Identities = 315/476 (66%), Gaps = 10/476 (2%) Strand=Plus/Plus Query 254468 TCTGCGACTTTTCTCAAATAGTTGTGTCTTTTTTCTTTTCGAAGTCTTTCGAACCGGAGG 254527 ||||| || ||||||| |||||||||||||||||| | || || | | | || || | | Sbjct 491480 TCTGCCACCTTTCTCACATAGTTGTGTCTTTTTTCCTCTCTTAGACGTGCAAAACGCATG 491539 Query 254528 GCTGACTGTCCTCCTCGACCGTGTTTCTTTGGGAGAGACACATCAAAA---GACAAAAGC 254584 || || || || |||| ||||||||||||||| ||| ||| | |||| | || | | Sbjct 491540 GCAGATTGACCACCTCTACCGTGTTTCTTTGGTAGATCCAC-TGAAAATTTGTGAAGAAC 491598 Query 254585 GTTGTCCTTGTGCTTCCAGAAAGAGTCGCAAAGAGAG-CCCCTGAGCCATCCACAATAAT 254643 | || || ||| | || ||||| | |||| | | |||||| ||||||| || || Sbjct 491599 G--GTTCTAGTGTTACCGGAAAGCGAACCAAACAATGATCCCTGA-CCATCCATAACGAT 491655 Query 254644 AAAGCCGTATGTTTTGTCGTCGTACAAAAGCTCTTTGAGACAATCCGTGTGAAAGACATT 254703 || ||| || | | ||| | | || || || ||| || || || || || Sbjct 491656 GAAACCGAATTTGTCATCGGCTTCCAGCAGTTCGGATAGAACTTCGGTATGGAATTTGTT 491715 Query 254704 ATCACAAGCGTACACTTTTTGGCTTATCGGACGGAAAGGTTCGACGTCGAATGCCACTTT 254763 |||||| || | | | | || || ||||||| | || || | ||||| Sbjct 491716 ATCACACAAATATAGGGATGTGTTGATTGGTTTATAAGGTTCAATATCAAAGGTGACTTT 491775 Query 254764 CTTCTCTTTGCCTTCAGGAAGCATCACTGTC-CCACTAAAAATAACGAGGCCGTTTTCGG 254822 ||| || || ||||| | || | | || |||| | ||||| | || ||| | Sbjct 491776 CTTTTCCTTACCTTCTTCATTGATGA-TATCACCACAGTAGATAACTAACCCATTTGGTG 491834 Query 254823 GGACTTTCGACAAGAGTTTTAGCTTTTGCTGGCATGAAACAATTGCCCCAAGAACGGAGA 254882 | ||||| | | |||||||| ||||| ||| ||| ||| || | |||||| | Sbjct 491835 GAACTTTAGTGTAAAGTTTTAGTTTTTGTTGGGTGGAAGTAATGGCAGATAAAACGGACA 491894 Query 254883 GCCTGTTTACCCTCGACTTGATATTCGATGCCGTTCCGTGTTCGTTTGTCAACATT 254938 | | |||||| ||||| ||||| || ||||| || || | ||| | ||| |||||| Sbjct 491895 GACGGTTTACTCTCGATTTGATGTTAGATGCAGTACCATATTCATCTGTTAACATT 491950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730398014088