Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq16 105 1e-17
seq10 84.2 5e-11
>seq16
Length=283865
Score = 105 bits (116), Expect = 1e-17
Identities = 328/490 (67%), Gaps = 22/490 (4%)
Strand=Plus/Plus
Query 281545 CTACGATGTCTTTGGGATTATAACTGGGAATGTTAGTAGACCAACCGGTTCCAATACCAC 281604
||||||| || ||||| ||||||||||||| || ||||| || ||||| |||||
Sbjct 98478 CTACGATATCAGCCGGATTGAAACTGGGAATGTTCGTCGACCATCCTGTTCCGATACCCT 98537
Query 281605 TTGAACCATTTACCAAAATACTCGGGATAATAGGTACATAACATTCTGGTTCAATTTTAT 281664
| |||||||||||||| | ||||| | ||| | ||| || || ||||||| |
Sbjct 98538 CAGCACCATTTACCAAAAGCATTGGGATTACAGGCAAATACCACTCGGGTTCAACCGTCA 98597
Query 281665 CACCATCATCATACAAATACTT---CAGAAGGTTATCATCTGTATCGA-CGAAAACCTGT 281720
||||||| | |||||| || || |||| |||||| | || |||||| | |
Sbjct 98598 GCTCATCATCTTGCAAATAGTTGTACA-AAGG--ATCATC-CAACGGATTGAAAACTTTT 98653
Query 281721 CGCGTCTTAGGGTTCAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCC 281780
| ||| | ||| | | ||||||||||| || | | | | || |||||| ||
Sbjct 98654 CTCGTGATTTCGTTTAACTGGGTGAAGATATATCTCGGAGCTGAGAAATCCTTACCA-CC 98712
Query 281781 TGCAGCCTCG---ACCCAAACTGACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCG 281837
|||| |||| ||| |||| ||| | || |||| |||| | |||||| ||
Sbjct 98713 AGCAG-CTCGGGTACCAAAAC-CACCGTTGGGTTTCAACAAGTTCAAGTTATTTGAACCA 98770
Query 281838 ACGTAATCCTGAGCCAGGTTGACGATTG-TCCCCTGAAGCGATACCTCACCGTGGTGATA 281896
||| ||| ||||||| | ||||| | | | ||| || |||||| ||||||||
Sbjct 98771 ACGAAATTTTGAGCCAAACCAATGATTGTTTGCATCAAG-GACTGCTCACCATGGTGATA 98829
Query 281897 GGCGCTGTGTTCGGCAACATAACCACTGAACTGTGCTACCTTCACGTC--TGATGTCAAG 281954
| | | || ||| ||||||||| ||||| || || || | || ||| |||
Sbjct 98830 ACCCGTTTTCTCTCCAATATAACCACTCAACTGGGCCACTTTGATTTCATTGA--CCAAA 98887
Query 281955 TTGCGTTTGAAAGCGCAATATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACA 282014
|| | |||||| | | | | ||||||| ||| ||| ||||||||||| | |||
Sbjct 98888 TTTCTCTTGAAACAACCAAACATGACTTTTCTTTGGCCAGGTTTGAAACCATCCA-AACA 98946
Query 282015 -GACGGAATG 282023
|| ||||||
Sbjct 98947 TGAAGGAATG 98956
>seq10
Length=432243
Score = 84.2 bits (92), Expect = 5e-11
Identities = 130/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511
|| |||||| ||| | ||| | || ||| |||| ||||| ||||| | | ||||
Sbjct 412514 GGAATGAACTGTGACTTGATGTGCCAATACGTCGAGTTCGTTGCCGATAGATTGCTTGTG 412455
Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571
|| | ||| || |||| || ||||| | ||||| || | ||||||||| ||||
Sbjct 412454 GCCTTGGGTAACAAGAAGGTTTACAATGTCACCAACCCATTCGACTTTATGGAGAACATT 412395
Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631
|| | ||| ||||||||||| ||||| ||| | || ||||| |||| | |||||
Sbjct 412394 TCCTTGGCAGGAAAGACCAACTTTTTCGAGAAGAGAGTTTCGGACTACCAGAAGGCTGGT 412335
Query 230632 GTGATG 230637
|| |||
Sbjct 412334 GTCATG 412329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823281671390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |