Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq16 105 1e-17 seq10 84.2 5e-11 >seq16 Length=283865 Score = 105 bits (116), Expect = 1e-17 Identities = 328/490 (67%), Gaps = 22/490 (4%) Strand=Plus/Plus Query 281545 CTACGATGTCTTTGGGATTATAACTGGGAATGTTAGTAGACCAACCGGTTCCAATACCAC 281604 ||||||| || ||||| ||||||||||||| || ||||| || ||||| ||||| Sbjct 98478 CTACGATATCAGCCGGATTGAAACTGGGAATGTTCGTCGACCATCCTGTTCCGATACCCT 98537 Query 281605 TTGAACCATTTACCAAAATACTCGGGATAATAGGTACATAACATTCTGGTTCAATTTTAT 281664 | |||||||||||||| | ||||| | ||| | ||| || || ||||||| | Sbjct 98538 CAGCACCATTTACCAAAAGCATTGGGATTACAGGCAAATACCACTCGGGTTCAACCGTCA 98597 Query 281665 CACCATCATCATACAAATACTT---CAGAAGGTTATCATCTGTATCGA-CGAAAACCTGT 281720 ||||||| | |||||| || || |||| |||||| | || |||||| | | Sbjct 98598 GCTCATCATCTTGCAAATAGTTGTACA-AAGG--ATCATC-CAACGGATTGAAAACTTTT 98653 Query 281721 CGCGTCTTAGGGTTCAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCC 281780 | ||| | ||| | | ||||||||||| || | | | | || |||||| || Sbjct 98654 CTCGTGATTTCGTTTAACTGGGTGAAGATATATCTCGGAGCTGAGAAATCCTTACCA-CC 98712 Query 281781 TGCAGCCTCG---ACCCAAACTGACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCG 281837 |||| |||| ||| |||| ||| | || |||| |||| | |||||| || Sbjct 98713 AGCAG-CTCGGGTACCAAAAC-CACCGTTGGGTTTCAACAAGTTCAAGTTATTTGAACCA 98770 Query 281838 ACGTAATCCTGAGCCAGGTTGACGATTG-TCCCCTGAAGCGATACCTCACCGTGGTGATA 281896 ||| ||| ||||||| | ||||| | | | ||| || |||||| |||||||| Sbjct 98771 ACGAAATTTTGAGCCAAACCAATGATTGTTTGCATCAAG-GACTGCTCACCATGGTGATA 98829 Query 281897 GGCGCTGTGTTCGGCAACATAACCACTGAACTGTGCTACCTTCACGTC--TGATGTCAAG 281954 | | | || ||| ||||||||| ||||| || || || | || ||| ||| Sbjct 98830 ACCCGTTTTCTCTCCAATATAACCACTCAACTGGGCCACTTTGATTTCATTGA--CCAAA 98887 Query 281955 TTGCGTTTGAAAGCGCAATATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACA 282014 || | |||||| | | | | ||||||| ||| ||| ||||||||||| | ||| Sbjct 98888 TTTCTCTTGAAACAACCAAACATGACTTTTCTTTGGCCAGGTTTGAAACCATCCA-AACA 98946 Query 282015 -GACGGAATG 282023 || |||||| Sbjct 98947 TGAAGGAATG 98956 >seq10 Length=432243 Score = 84.2 bits (92), Expect = 5e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511 || |||||| ||| | ||| | || ||| |||| ||||| ||||| | | |||| Sbjct 412514 GGAATGAACTGTGACTTGATGTGCCAATACGTCGAGTTCGTTGCCGATAGATTGCTTGTG 412455 Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571 || | ||| || |||| || ||||| | ||||| || | ||||||||| |||| Sbjct 412454 GCCTTGGGTAACAAGAAGGTTTACAATGTCACCAACCCATTCGACTTTATGGAGAACATT 412395 Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631 || | ||| ||||||||||| ||||| ||| | || ||||| |||| | ||||| Sbjct 412394 TCCTTGGCAGGAAAGACCAACTTTTTCGAGAAGAGAGTTTCGGACTACCAGAAGGCTGGT 412335 Query 230632 GTGATG 230637 || ||| Sbjct 412334 GTCATG 412329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823281671390