Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq10 154 2e-32 >seq10 Length=432243 Score = 154 bits (170), Expect = 2e-32 Identities = 564/869 (65%), Gaps = 33/869 (4%) Strand=Plus/Plus Query 15914 TGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCC 15973 ||||| || ||| | || ||||| ||||| || ||||| | || || || || ||| Sbjct 412345 TGGTAGTCCGAAACTCTCTTCTCGAAAAAGTTGGTCTTTCCTGCCAAGGAAATGTTCTCC 412404 Query 15974 ATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAACTA 16031 ||||| || || || || || | || ||| | | | ||||| || || || | Sbjct 412405 ATAAAGTCGAATGGGTTGGTGACATTGTAAACCTTCTTGT-TACCCAAGG-CCACAAGCA 412462 Query 16032 ATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTC 16091 ||||||| || || || || | ||||| ||||| ||||| || || ||||| | | | Sbjct 412463 ATCTATCGGCAACGAACTCGACGTATTGGCACATCAAGTCACAGTTCATTCCCAACAAGC 412522 Query 16092 GTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATAT 16151 | | || | || | || || ||| || ||| || || || || |||| || | Sbjct 412523 TTGCTGGCAAGGCATCGGTAAAGTATTCTTTTTCAATAGTGACGGCCTCAGTAATAATCT 412582 Query 16152 ------CGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACG 16205 || | ||| | |||| ||| | | ||| | ||| |||| | || | Sbjct 412583 TCTCCACGATAGCTGG-GTTT-----GGTCTGTTGTTCAAGTGAGAGAACAACAAGCAGG 412636 Query 16206 CGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTG 16265 | ||||| || | ||||||||||||| || | ||||||||| || || | || | Sbjct 412637 CAAAGTCAGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTGGAGAACGTAAGACCAG 412696 Query 16266 GCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATAC 16325 |||| |||| ||||| |||||||| || | ||||| || || || ||||| |||| Sbjct 412697 GCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACGAGCCAGAGAAGAAAATAC 412756 Query 16326 CCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTAT-TACGAATC 16384 | || |||| ||||| || | |||| ||| || || || || | | | || ||| Sbjct 412757 CTTCGACAGCAGCAAAGGCCACCAATCTTTCGGCAAACAAGGCCTCGTCGTCTGCG-ATC 412815 Query 16385 CATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAAC 16444 ||| || |||| ||||| || | || || ||| || |||| || || || ||| Sbjct 412816 CATCTCAAGGCCCACTCGGCCTTCTTCTTAATGCAAGGGATGTTTTCGATAGCGTTGAAC 412875 Query 16445 AATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCT 16504 || || || | | || | || || | || |||| ||| ||| |||| Sbjct 412876 AAAAAGTCAGCCTCTTTAGGGTCTTTGATGTAGGAGTCGATCAACAAAGAGTAGGTTTCC 412935 Query 16505 GAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGT 16564 ||||| ||||| || || ||||| ||||| ||||| ||| ||||| | || || Sbjct 412936 GAGTGGATGTTTTCCATCATGATCTGGAATCCGTAGAAACATTTGGCCTCTGGGATCTGG 412995 Query 16565 ACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAA 16624 || || | |||| ||| ||| ||||||||| || || ||||| |||||||| Sbjct 412996 ACCTCAGCAGAAAAGTTCTCCACCAAGTTCTCATTGACAATTCCGTCCGAAGCAGCAAAG 413055 Query 16625 AACGCCAATA-TGTGCTTAATGAAATATTTTTCGTCAGATGTAAG--AATATG-----CC 16676 || ||||| | | || ||||| || | |||| ||| || | | || || Sbjct 413056 AAAGCCAACACTCTG-GAGATGAAGAATCTCTCGT----TGTCAGTCATTCTGTTCTTCC 413110 Query 16677 AATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCA-AAAGCTAGCCACTGCC 16735 | || || | ||||| || | || | |||||| | ||||| |||| | || | ||| Sbjct 413111 AGTCGTTGATGTCTTTCGACAAGTCAATTTCTTCCGCAGTCCAGAAAGAT-GCTTCGGCC 413169 Query 16736 TTTTTATACATTTTCCAAATATCATTGTA 16764 ||||| ||||||| |||||| || ||||| Sbjct 413170 TTTTTGTACATTTGCCAAATCTCGTTGTA 413198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414061187960