Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 seq14 91.5 1e-13 >seq1 Length=1779567 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | || || ||||| || || ||||||||| || ||| || | Sbjct 999478 ATGCAAATCTTTGTTAAGACTTTGACAGGTAAGACCATTACCTTGGAGGTCGAATCCTCT 999537 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | || | ||| || || || || |||||| | || || || Sbjct 999538 GACACCATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAG 999597 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 |||||| | |||||||| || || |||||||| || || ||| || |||| ||||| Sbjct 999598 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGACGGCAGAACCTTGTCCGACTACAAC 999657 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || |||||||||||||| | ||| ||||||| |||| |||| || Sbjct 999658 ATCCAAAAGGAATCTACCTTGCACTTGGTGTTGAGATTGAGAGGTGG 999704 >seq14 Length=288459 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208 || || |||||| | ||||| || || || |||||||||||| || |||| || |||| Sbjct 84047 GACCAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGAC 83988 Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| ||||| |||||||| ||| | ||| ||||||| |||| |||| || Sbjct 83987 TACAACATTCAGAAGGAATCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 83935 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 25119 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 25178 |||||| || || ||||| | || ||| || |||||| | ||||| || || || Sbjct 84533 AAAATTCAAGACAAGGAAGGAATTCCTCCAGACCAGCAAAGATTGATCTTCGCTGGTAAG 84474 Query 25179 CAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCAC 25238 ||||||||||| || |||| || |||| ||||| || |||||||| || ||| | ||| Sbjct 84473 CAATTGGAAGACGGCAGAACTTTGTCCGACTACAACATCCAAAAGGAGTCCACTTTGCAC 84414 Query 25239 ATGGTGTTACGATTACGAGGAGG 25261 ||||||| |||| |||| || Sbjct 84413 TTGGTGTTGAGATTGAGAGGTGG 84391 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208 || || |||||| | ||||| || || || ||||||||||| || |||| || |||| Sbjct 84275 GACCAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGAC 84216 Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| || |||||||| || ||| | ||| ||||||| |||| |||| || Sbjct 84215 TACAACATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 84163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410796534650942