Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq10 221 1e-52
seq14 95.1 1e-14
seq1 86.0 6e-12
>seq10
Length=432243
Score = 221 bits (244), Expect = 1e-52
Identities = 521/781 (67%), Gaps = 13/781 (2%)
Strand=Plus/Minus
Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTAC 116650
|||||| ||||| || ||| | ||||| || | ||| || || |||| ||||||
Sbjct 413234 GAGAACAAGCGCCGTTTTGTGTTGTTCCCTATCAAGTACAACGAGATTTGGCAAATGTAC 413175
Query 116651 AAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGC 116710
||||||||||| || || |||||||| | || || | ||| |||| || |||| | |
Sbjct 413174 AAAAAGGCCGAAGCATCTTTCTGGACTGCGGAAGAAATTGACTTGTCGAAAGACATCAAC 413115
Query 116711 GACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTT 116767
|||||| || | ||| ||||||||| | |||||| ||| |||| ||
Sbjct 413114 GACTGGAAGAACAGAATGACTGACAACGAGAGATTCTTCATCTCCAGAGTGTTGGCTTTC 413055
Query 116768 TTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAG--CGTTTC-GCTCAGGAG 116824
|| || || ||||| || ||||| ||||| |||| ||| | |||| ||| |||
Sbjct 413054 TTTGCTGCTTCGGACGGAATTGTCAATGAGAACTTGGTGGAGAACTTTTCTGCT---GAG 412998
Query 116825 GTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCAC 116884
|| ||| | | ||||| || |||||||| || |||||| ||||| ||| | |||
Sbjct 412997 GTCCAGATCCCAGAGGCCAAATGTTTCTACGGATTCCAGATCATGATGGAAAACATCCAC 412938
Query 116885 TCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCT--CC 116942
||||||| || || | |||||| | ||| | | | ||| ||| |
Sbjct 412937 TCGGAAACCTACTCTTTGTTGATCGACTCCTACATCAAAGACCCTAAAGAG--GCTGACT 412880
Query 116943 GTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGC 117002
|||||| ||||| ||||| | || || ||| | || |||||||||||||||| ||
Sbjct 412879 TTTTGTTCAACGCTATCGAAAACATCCCTTGCATTAAGAAGAAGGCCGAGTGGGCCTTGA 412820
Query 117003 GCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCG 117062
| |||||||| | | |||||| || | ||| | |||||||||| || || ||||
Sbjct 412819 GATGGATCGCAGACGACGAGGCCTTGTTTGCCGAAAGATTGGTGGCCTTTGCTGCTGTCG 412760
Query 117063 AGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCA 117122
| || | ||||| || ||| || ||| | || || ||| | ||||| | || | |
Sbjct 412759 AAGGTATTTTCTTCTCTGGCTCGTTTGCCTCTATCTTCTGGTTGAAGAAGAGAGGTTTGA 412700
Query 117123 TGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACT 117182
|||| || || || ||| |||||| | || | ||| ||||| ||| |||| ||||
Sbjct 412699 TGCCTGGTCTTACGTTCTCCAACGAATTGATTTGCAGAGACGAAGGTTTGCACACTGACT 412640
Query 117183 TTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGA 117242
||||||| ||| ||||| || ||| | |||| | | | || ||| | |||
Sbjct 412639 TTGCCTGCTTGTTGTTCTCTCACTTGAACAACAGACCAAACCCAGCTATCGTGGAGAAGA 412580
Query 117243 TCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTC 117302
| | || || || ||| | || || | | | | ||||| || |||| | |
Sbjct 412579 TTATTACTGAGGCCGTCACTATTGAAAAAGAATACTTTACCGATGCCTTGCCAGCAAGCT 412520
Query 117303 TGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGC 117362
|| ||||| | || || || ||||| |||||| |||||||||| ||||| || |||
Sbjct 412519 TGTTGGGAATGAACTGTGACTTGATGTGCCAATACGTCGAGTTCGTTGCCGATAGATTGC 412460
Query 117363 T 117363
|
Sbjct 412459 T 412459
>seq14
Length=288459
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || | || || || |||||||| | || || ||| | ||
Sbjct 84389 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCGTCC 84330
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||| || || | ||||| ||||| || || | ||||||
Sbjct 84329 GACACTATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATTCCACCTGACCAG 84270
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||| || | |||| ||| || || || |||| |||| | || | ||||||||||
Sbjct 84269 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACAAC 84210
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||| |||||| |||| |||| | |||||| | ||||| || ||
Sbjct 84209 ATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 84163
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| || || ||||| | || ||||| |||||||| | || || ||| | |
Sbjct 85074 AATGCAAATCTTTGTTAAAACCTTGACCGGCAAGACCATCACATTGGAAGTTGAATCTTC 85015
Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
||||| | | |||| | ||| || || | || || ||||| || || | ||||
Sbjct 85014 CGACACTATCGACAACGTT-AAGTCCAAGATCCAAGATAAGGAGGGAATTCCTCCTGACC 84956
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
||||| || | || | || || || || |||| |||| | ||| | ||||||||
Sbjct 84955 AGCAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACA 84896
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||| |||||| |||| |||| | |||||| | ||||| || ||
Sbjct 84895 ACATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 84847
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || | || || || |||||||| | || || || | |
Sbjct 84617 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAGTCTTCT 84558
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | || |||| ||| ||||| || || || || | |||||
Sbjct 84557 GACACCATTGACAACGTTAAATCTAAAA-TTCAAGACAAGGAAGGAATTCCTCCAGACCA 84499
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||| || | |||| ||| || || || |||| |||| | || | |||||||||
Sbjct 84498 GCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACAA 84439
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||| |||||| |||| |||| | |||||| | ||||| || ||
Sbjct 84438 CATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 84391
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || | || || || |||||||| | || || ||| | ||
Sbjct 84161 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCGTCC 84102
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||| || || | ||||| ||||| || || | ||||||
Sbjct 84101 GACACTATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATTCCACCTGACCAG 84042
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||| || | |||| ||| || || || |||| || | | || | ||||||||||
Sbjct 84041 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTACAAC 83982
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|| |||||||| |||| |||| | |||||| | ||||| || ||
Sbjct 83981 ATTCAGAAGGAATCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 83935
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || | || || || |||||||| | || || ||| | ||
Sbjct 84845 ATGCAAATTTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 84786
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||| || || | ||||| ||||| ||||| | ||||||
Sbjct 84785 GACACAATTGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGACCAG 84726
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||| || | |||| ||| || || || |||| |||| | ||| | |||||||||
Sbjct 84725 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAAC 84666
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|| |||||||| | || |||| | || ||| | ||||| || ||
Sbjct 84665 ATTCAGAAGGAATCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 84619
>seq1
Length=1779567
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || | || || || ||||| ||| | || |||||| || |
Sbjct 999478 ATGCAAATCTTTGTTAAGACTTTGACAGGTAAGACCATTACCTTGGAGGTCGAATCCTCT 999537
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | ||| || || | ||||| || || || || | ||||||
Sbjct 999538 GACACCATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAG 999597
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||| || | |||| || || || || |||| |||| | ||| | ||||||||||
Sbjct 999598 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGACGGCAGAACCTTGTCCGACTACAAC 999657
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGG 40919
||||| ||||| | || |||| | |||||| | ||||| || || ||
Sbjct 999658 ATCCAAAAGGAATCTACCTTGCACTTGGTGTTGAGATTGAGAGGTGGTGG 999707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218858667280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |