Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq14 114 2e-20
seq1 98.7 1e-15
>seq14
Length=288459
Score = 114 bits (126), Expect = 2e-20
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||||||||| | ||| || ||||| || ||||| ||||| || || || || || |
Sbjct 83933 TTCCACCTCTCAATCTCAACACCAAGTGCAAAGTGGATTCCTTCTGAATGTTGTAGTCGG 83992
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| | |||||||| ||| || ||||| || ||||| || |||||||||||||| || || |
Sbjct 83993 ACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTG 84052
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
||||||| || || ||||| ||| || || ||| |
Sbjct 84053 GAATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAA 84112
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||||| ||||| || ||||| || || || |||| ||| ||||||||
Sbjct 84113 CTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84161
Score = 113 bits (124), Expect = 7e-20
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| || ||||| || || || || || || || ||
Sbjct 84847 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84906
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || || ||||| || ||||||||||||||||||||||| || ||||||
Sbjct 84907 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGGA 84966
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
||||| || |||||||| ||| || ||| ||| |||
Sbjct 84967 ATTCCCTCCTTATCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGATTCAACT 85026
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|| | |||||| || || || || || ||||||| || |||||||||
Sbjct 85027 TCCAATGTGATGGTCTTGCCGGTCAAGGTTTTAACAAAGATTTGCATT 85074
Score = 107 bits (118), Expect = 3e-18
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| || ||||| || || || || || || || ||
Sbjct 84391 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84450
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||||| || || ||||| || ||||| || |||||||||||||| || ||||||
Sbjct 84451 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGAGGA 84510
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||| || |||||
Sbjct 84511 ATTCCTTCCTTGTCTTG 84527
Score = 102 bits (112), Expect = 1e-16
Identities = 154/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| || ||||| || || || || || || || ||
Sbjct 84163 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84222
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||||| || || ||||| || ||||| || |||||||||||||| || || |||
Sbjct 84223 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGA 84282
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
||||| || || ||||| ||| || || ||| |||
Sbjct 84283 ATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAACT 84342
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| ||||| || ||||| || || || |||| ||| ||||||||
Sbjct 84343 TCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84389
Score = 93.3 bits (102), Expect = 6e-14
Identities = 152/227 (67%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| || || |||||||| || || || || || ||
Sbjct 84619 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGATTCCTTCTGAATGTTGTAGTCAGAC 84678
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || || ||||| || ||||| || |||||||||||||| || || ||
Sbjct 84679 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGG 84738
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
||||| || || ||||| || || ||| ||| |||
Sbjct 84739 ATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCAATTGTGTCGGAAGATTCAACT 84798
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| ||||| || ||||| || || || |||| ||| ||||||||
Sbjct 84799 TCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAAATTTGCAT 84845
>seq1
Length=1779567
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| || || |||||||| || || || || || ||
Sbjct 999704 CCACCTCTCAATCTCAACACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGAC 999645
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||||| || || ||||| || || ||||| |||||||||||||| || || |||
Sbjct 999644 AAGGTTCTGCCGTCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCAGGTGGA 999585
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 999584 ATACCTTCCTTGTCTTG 999568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743525907413760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |