Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq14 105 4e-18
seq1 91.5 1e-13
>seq14
Length=288459
Score = 105 bits (116), Expect = 4e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || | || |||| ||||| ||| ||||| ||| ||||| ||||||||||||||
Sbjct 83934 TCCACCTCTCAATCTCAACACCAAGTGCAAAGTGGATTCCTTCTGAATGTTGTAGTCGGA 83993
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| | | | || ||||| ||||| || ||||| || | | |||||||| ||
Sbjct 83994 CAAAGTTCTGCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGG 84053
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | ||||||||| ||||| ||| | || | | || | |||| |||||| ||
Sbjct 84054 AATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAAC 84113
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| || ||||| | ||| || || ||||| |||||
Sbjct 84114 TTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84161
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234
|||| ||||| ||| ||||| || || || |||||||||||||||| | | ||
Sbjct 84175 CTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCG 84234
Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294
|| ||||| ||||| || ||||| || | | |||||||| || | | |||||||
Sbjct 84235 TCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCCTCCTTG 84294
Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATG 34354
|| ||||| ||| | || | | || | |||| |||||| || || | ||||||
Sbjct 84295 TCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAACTTCTAAAGTGATG 84354
Query 34355 GTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || ||||| | ||| || || ||||| |||||
Sbjct 84355 GTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84389
Score = 95.1 bits (104), Expect = 8e-15
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234
|||| ||||| ||| ||||| || || || |||||||||||||||| | ||
Sbjct 84859 CTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCG 84918
Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294
|| ||||| ||||| || || ||||| | | |||||||| || | | ||||||
Sbjct 84919 TCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGGAATTCCCTCCTTA 84978
Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATG 34354
|| ||||| ||| | | | | || | |||| ||||| || |||| ||||||
Sbjct 84979 TCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGATTCAACTTCCAATGTGATG 85038
Query 34355 GTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| |||||||| | ||||| |||||||| |||||
Sbjct 85039 GTCTTGCCGGTCAAGGTTTTAACAAAGATTTGCAT 85073
Score = 82.4 bits (90), Expect = 5e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234
|||| |||| ||| || ||| ||| ||||| ||||||||||| |||| | ||
Sbjct 84631 CTCAAAACCAAGTGCAAGGTAGATTCCTTCTGAATGTTGTAGTCAGACAAGGTTCTACCG 84690
Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294
|| ||||| ||||| || ||||| || | | |||||||| || | | |||||||
Sbjct 84691 TCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGGATTCCCTCCTTG 84750
Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATG 34354
|| ||||| ||| | || | | || | |||| ||||| || || | ||||||
Sbjct 84751 TCTTGGATCTTGGACTTAACATTGTCAATTGTGTCGGAAGATTCAACTTCTAAAGTGATG 84810
Query 34355 GTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || || || | ||| || || || || |||||
Sbjct 84811 GTCTTACCAGTCAAAGTCTTAACGAAAATTTGCAT 84845
>seq1
Length=1779567
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234
|||| ||||| ||| || ||| ||| || || |||||||||||||||| | | ||
Sbjct 999692 CTCAACACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCG 999633
Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294
|| ||||| ||||| || || || || | | |||||||| || | | ||||||
Sbjct 999632 TCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTG 999573
Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATG 34354
|| ||||| ||| | || | | || | || | |||||||| |||| || |||
Sbjct 999572 TCTTGGATCTTGGACTTAACATTGTCGATGGTGTCAGAGGATTCGACCTCCAAGGTAATG 999513
Query 34355 GTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || || || | ||| || |||||||| |||||
Sbjct 999512 GTCTTACCTGTCAAAGTCTTAACAAAGATTTGCAT 999478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071791315680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |