Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq10 152 5e-32 >seq10 Length=432243 Score = 152 bits (168), Expect = 5e-32 Identities = 469/716 (66%), Gaps = 16/716 (2%) Strand=Plus/Plus Query 13927 AACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAA 13986 |||||| || || || ||||| || || ||| ||| || || || |||||||| || || Sbjct 412356 AACTCTCTTCTCGAAAAAGTTGGTCTTTCCTGCCAAGGAAATGTTCTCCATAAAGTCGAA 412415 Query 13987 TGGATTTGTTGACAT---AAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGC 14043 ||| || || ||||| |||| ||| | | || || | | || |||||||| || Sbjct 412416 TGGGTTGGT-GACATTGTAAAC-CTTCTTGTTACCCAAGGCCACA-AGCAATCTATCGGC 412472 Query 14044 AATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAAT 14103 || |||||| | ||||| |||| || ||||| ||||| || | | || | || | Sbjct 412473 AACGAACTCGACGTATTGGCACATCAAGTCACAGTTCATTCCCAACAAGCTTGCTGGCAA 412532 Query 14104 TATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAAT 14163 || ||| || |||||||||| |||| || ||||| | ||||| || | || Sbjct 412533 GGCATCGGTAAAGTATTCTTTTTCAATAGTGACGGCCTCAGTAATAATCTTCTCCACGAT 412592 Query 14164 TTCA---TTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATG 14220 | || | | | | || || || || | || || ||||| ||| || Sbjct 412593 AGCTGGGTTTG--GTCTGTTGTTCAAG-TGAGAGAACAACAAGCAGGCAAAGTCAGTGTG 412649 Query 14221 AAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCG 14280 | || || ||||| | ||| | |||||| || || || | || |||||||| |||| Sbjct 412650 CAAACCTTCGTCTCTGCAAATCAATTCGTTGGAGAACGTAAGACCAGGCATCAAACCTCT 412709 Query 14281 tttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGC 14340 || || ||||| || || | || || || || || ||||| || || || || ||||| Sbjct 412710 CTTCTTCAACCAGAAGATAGAGGCAAACGAGCCAGAGAAGAAAATACCTTCGACAGCAGC 412769 Query 14341 AAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCA 14400 ||| || | |||| ||| ||||| | || | | || | |||||| | ||||| Sbjct 412770 AAAGGCCACCAATCTTTCGGCAAACAAGGCCTCGTCGTCTGCGATCCATCTCAAGGCCCA 412829 Query 14401 TTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTC 14460 || | || || ||||| || || |||| ||||| || || ||| || ||| Sbjct 412830 CTCGGCCTTCTTCTTAATGCAAGGGATGTTTTCGATAGCGTTGAACAAAAAGTCAGCCTC 412889 Query 14461 TTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTT 14518 ||||| | |||| |||| | || || | || || |||| ||||| |||||| Sbjct 412890 TTTAGGGTCTTTGA--TGTAGGAGTCGATCAACAAAGAGTAGGTTTCCGAGTGGATGTTT 412947 Query 14519 TCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAA 14578 ||||| ||||| || || || |||||| | || |||| || ||||| | || Sbjct 412948 TCCATCATGATCTGGAATCCGTAGAAACATTTGGCCTCTGGGATCTGGACCTCAGCAGAA 413007 Query 14579 AATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAA 14634 || | || |||| || ||||| || || || || ||| ||||| || ||||| Sbjct 413008 AAGTTCTCCACCAAGTTCTCATTGACAATTCCGTCCGAAGCAGCAAAGAAAGCCAA 413063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345280446040