Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq10 152 5e-32
>seq10
Length=432243
Score = 152 bits (168), Expect = 5e-32
Identities = 469/716 (66%), Gaps = 16/716 (2%)
Strand=Plus/Plus
Query 13927 AACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAA 13986
|||||| || || || ||||| || || ||| ||| || || || |||||||| || ||
Sbjct 412356 AACTCTCTTCTCGAAAAAGTTGGTCTTTCCTGCCAAGGAAATGTTCTCCATAAAGTCGAA 412415
Query 13987 TGGATTTGTTGACAT---AAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGC 14043
||| || || ||||| |||| ||| | | || || | | || |||||||| ||
Sbjct 412416 TGGGTTGGT-GACATTGTAAAC-CTTCTTGTTACCCAAGGCCACA-AGCAATCTATCGGC 412472
Query 14044 AATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAAT 14103
|| |||||| | ||||| |||| || ||||| ||||| || | | || | || |
Sbjct 412473 AACGAACTCGACGTATTGGCACATCAAGTCACAGTTCATTCCCAACAAGCTTGCTGGCAA 412532
Query 14104 TATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAAT 14163
|| ||| || |||||||||| |||| || ||||| | ||||| || | ||
Sbjct 412533 GGCATCGGTAAAGTATTCTTTTTCAATAGTGACGGCCTCAGTAATAATCTTCTCCACGAT 412592
Query 14164 TTCA---TTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATG 14220
| || | | | | || || || || | || || ||||| ||| ||
Sbjct 412593 AGCTGGGTTTG--GTCTGTTGTTCAAG-TGAGAGAACAACAAGCAGGCAAAGTCAGTGTG 412649
Query 14221 AAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCG 14280
| || || ||||| | ||| | |||||| || || || | || |||||||| ||||
Sbjct 412650 CAAACCTTCGTCTCTGCAAATCAATTCGTTGGAGAACGTAAGACCAGGCATCAAACCTCT 412709
Query 14281 tttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGC 14340
|| || ||||| || || | || || || || || ||||| || || || || |||||
Sbjct 412710 CTTCTTCAACCAGAAGATAGAGGCAAACGAGCCAGAGAAGAAAATACCTTCGACAGCAGC 412769
Query 14341 AAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCA 14400
||| || | |||| ||| ||||| | || | | || | |||||| | |||||
Sbjct 412770 AAAGGCCACCAATCTTTCGGCAAACAAGGCCTCGTCGTCTGCGATCCATCTCAAGGCCCA 412829
Query 14401 TTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTC 14460
|| | || || ||||| || || |||| ||||| || || ||| || |||
Sbjct 412830 CTCGGCCTTCTTCTTAATGCAAGGGATGTTTTCGATAGCGTTGAACAAAAAGTCAGCCTC 412889
Query 14461 TTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTT 14518
||||| | |||| |||| | || || | || || |||| ||||| ||||||
Sbjct 412890 TTTAGGGTCTTTGA--TGTAGGAGTCGATCAACAAAGAGTAGGTTTCCGAGTGGATGTTT 412947
Query 14519 TCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAA 14578
||||| ||||| || || || |||||| | || |||| || ||||| | ||
Sbjct 412948 TCCATCATGATCTGGAATCCGTAGAAACATTTGGCCTCTGGGATCTGGACCTCAGCAGAA 413007
Query 14579 AATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAA 14634
|| | || |||| || ||||| || || || || ||| ||||| || |||||
Sbjct 413008 AAGTTCTCCACCAAGTTCTCATTGACAATTCCGTCCGAAGCAGCAAAGAAAGCCAA 413063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345280446040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |