Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq13 343 1e-89 seq10 206 2e-48 seq14 102 7e-17 seq28 89.7 5e-13 >seq13 Length=360411 Score = 343 bits (380), Expect = 1e-89 Identities = 1394/2170 (64%), Gaps = 52/2170 (2%) Strand=Plus/Minus Query 22082 TTGCAAGCTGCGAAAGCGGCGGTCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGT 22141 |||| || || |||| | | | | ||| || |||||||| || || || || | | Sbjct 46648 TTGCCTGCAGCAGAAGCAGAGTTTTGGTCAACAGTAAACTGGATCGCAGCAGCAGCAGCT 46589 Query 22142 TTGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATC 22201 | || | | || ||||| |||||||||| ||| ||||||| ||||||| || || Sbjct 46588 TGCGTTCTCAAGTAGTACATACCCGTCTTCAATCCCTTCTTCCATCCGTAAAAGTGCATG 46529 Query 22202 GACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCG 22261 || ||||| || || | | || |||| | || |||||||| |||||| Sbjct 46528 GAAGTCAACTTACCCATAGTAGGTTCTCTGATGTGGATGTTCAACGACTGTGACTGATCA 46469 Query 22262 ATAAACGCTCCTCGATCGGCGGCCATATTTATCAATG-TACGCATC---GACATTTCCCA 22317 |||||||| ||| ||||| ||||| | ||||| || || || || |||||||| Sbjct 46468 ATAAACGCAGCTCTGTCGGCAGCCATGT----CAATGATATGCTTCTGAGAGATTTCCCA 46413 Query 22318 TACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCG-ATCCTCTGGACGGACC 22376 ||||| || || | || |||| || || | | || | | ||| | ||| | Sbjct 46412 CACGGTTTTATATAAACGCTTGATTTCGTCTGGGA-CATTTGGTAAAGACTGAATGGATC 46354 Query 22377 CGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAAT 22436 |||| ||| ||||| || || || | || ||||| | ||| | | | || | Sbjct 46353 CGTTGTTGGCAATGATGTTGTTCTTCATATTGTCATTCCAAATACCTAAGTCAACTAAGT 46294 Query 22437 CTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAG-ACGCGGCGTTGGTAA 22495 | || | || || |||| || | || |||||||||| |||| || | | |||| Sbjct 46293 CCTTCAACATGTGTGGGTTAACAATCTGGAACTCGCCGG-CAAGCACTCTTCTGGAGTAA 46235 Query 22496 ATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCG 22555 |||||||||||| | ||||| || |||| ||||| |||| || |||| || || || Sbjct 46234 ATGTTGGATGTGTAAGGTTCAAAGCATTCGTTGTTACCCAAGATTTGAGAAGTAGAGGCT 46175 Query 22556 GTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTG--AAATTTTACTCT 22613 || |||||||| || | || | || ||||| | ||||| || | ||||||| || Sbjct 46174 GTTGGCATCGGAGCAACAAGCAAAGAATTTCTGAGACCGTGTTTGGCCAAATTTTGCTTC 46115 Query 22614 TGAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCA 22673 || ||| ||||||||||| ||||| ||| | ||||||||| ||||| |||| Sbjct 46114 AAAGTATC--CCAGTCCCACAACTCGGATGGCTT---TCTGTCCCACAAGTCGTACTGCA 46060 Query 22674 ACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAA 22733 ||| || ||| || ||||| || || || || ||||| | | |||| Sbjct 46059 ACAATCCCTTTGACGCAGGAGAACCTTCATATGTCTCATATGGACCTTCCTCCTGAGCAA 46000 Query 22734 GTTCG-CAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAAT 22792 | ||| || | || |||| || | | ||| || |||||||| || | ||||||| Sbjct 45999 GCTCGATAGAT-GCTTCCACAGCAGCATGATAAATGGTCTCGAATATCTGAATGTTCAAC 45941 Query 22793 TCGGCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCC 22852 || || | | ||| | |||| | || || ||| || || || | ||| Sbjct 45940 TCTTTAGCTTCCTGGGAGTCGAAAGGCAATCTCAAGGACATGAATGCATCAGCAAGACCT 45881 Query 22853 TGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAA-AGG 22911 ||||| || | | | || |||| |||| ||| ||| || ||| || || ||| ||| Sbjct 45880 TGAACTCCAAGAGCAATAGGTCTGTTTCTCATATTGGA-TCTTCTGGCTTCCTCAACAGG 45822 Query 22912 ATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNN 22971 || |||| || || |||||||||||||||| || |||| || || | Sbjct 45821 GTAAAAATTTCTGTCAATGATTCTGTTCAAGTTTCTAGTAACAACCTTGGTCACCTCGTG 45762 Query 22972 NNNNNNNTCAAAGTCGTA-----AAC-----GCCCGATTGTACAACAAACTTGTTG--AC 23019 ||||||| ||| ||| || || | |||| || || | | Sbjct 45761 CAACTTATCAAAGTTGTACCAGGAACTAGATGCATCTTTCT-CAACGAA--TGAAGGCAA 45705 Query 23020 GGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTC 23079 || || ||||| | || || || || || || ||| ||| | |||||| ||||| || Sbjct 45704 AGCAATGGAGGCCAAGTTACAGACAGCAACTTCTTCTGGGGAAGAGTACTCGACAATCTC 45645 Query 23080 GGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCA 23139 ||| | || | || || | ||||| || | ||||| |||| || || Sbjct 45644 ACAACACAAGTTAGATGATTTGATAATACCCAAGTTCTTTTGGTTAGTTTTCTTGTTACA 45585 Query 23140 CGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCG 23199 | ||||||||| | |||| | || || || ||||| |||| || | ||| | Sbjct 45584 AGCATCCTTGTACAACATGAATGGAGTTCCTGTCTCAGTTTGCGCTTCCAAGATAGAGTA 45525 Query 23200 CCACATAGTCTGAGCGTGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGT 23258 ||| | | ||||| | || || | | | | | ||||||| ||| ||||||| || Sbjct 45524 CCAAAGCTTTTGAGCCTTGAC-GGTGGATCTTCCACGGCCTTCTCTCTCATACTTTTCGT 45466 Query 23259 ACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACAC 23317 |||| || ||||| || | ||||| ||| || |||| || || | || | ||| | Sbjct 45465 ACAAAGCTTCAAACTCATCGCCGTAGACA-TCAGCCAAACCAGGAGCTTCATTTGGAGAA 45407 Query 23318 ATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGA 23377 | | | |||| || | |||||| | |||| || | |||||| ||||| ||| Sbjct 45406 AACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAACAAATCCGGGATCCAAAGA 45347 Query 23378 GCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAA 23437 || ||||| || | ||| | | || || || ||| ||||||| | | || | Sbjct 45346 GCAGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTGGTTCTTTCTAATGTCGATG 45287 Query 23438 AAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTA 23497 ||||| || | ||| |||||||| ||||| | ||||| ||||| ||||| || ||||| Sbjct 45286 AAGTCGAAAATGTCAGCATGCCAAGGCTCCAAGTAAATCGCAAAAGCGCCTGGCCTCTTG 45227 Query 23498 TTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGA 23557 ||||| || || ||||| ||||| || ||||||||| | || | | ||| || | || | Sbjct 45226 TTGCCACCTTGGTCGACATAACGTGCTGTGTTGTTGAAAACACGCACCATTGGAATGATA 45167 Query 23558 CCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACG 23617 ||||| || | ||| || || | | || | || | |||||| | | Sbjct 45166 CCGTTAGAAGTACCGTTAGTACCTGCAATGTAAGCGCCAGTACTTCTGATGTTGTGGATG 45107 Query 23618 TGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAG 23677 || ||||| || || || | || || || | |||||| || | |||||||| Sbjct 45106 TGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGCGCATGTCTTTAATGTGTCGTAA 45047 Query 23678 ATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTG 23737 || || |||||| ||| || || | || || | |||||| || |||||||| | | Sbjct 45046 ATACCGTCGATGGAGTCATCCTTCATGGCAACAAGGAAACAAGACGACATTTGGGGGCTT 44987 Query 23738 GGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGA 23797 || ||| | || ||||| || || |||| |||||||||| | ||||| | | Sbjct 44986 GGGGTACCTGCATTGAACAAGGTTGGAGAACCGTGAGTAAAGTATCTCTGGGACATCAAA 44927 Query 23798 TTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATC 23857 ||||| || ||||| | |||||||| | ||||| ||||| | || || | ||| Sbjct 44926 TTGTAAGTTTCGATCACACGTTCAATGTCATTCCCGTGAATACCAACCGCAACTCTCATG 44867 Query 23858 ATCATGTATTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAGATATGAACGT 23914 |||| | || ||||| | | ||| | ||||| | | ||| || ||||| | | Sbjct 44866 ATCAAATGCTGTGGTCTTTCAGCAACCTT---CCCGTTGACTCTGAGCAAGTATGATCTT 44810 Query 23915 TGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAA 23974 | || || || || || || |||| ||||| || || | || | || ||||| || Sbjct 44809 TCCAAAGTCTTGAAACCGAAGTAGTTGTAGTTGAAATCTCTGTCATAGACGATGGCAGAG 44750 Query 23975 TTCAAACGGTACGCATTGGCAGCGATGATGTTGTAATGAAAATTC-GATATCATCGGCGT 24033 ||||| || || || || |||||| |||| ||| ||| || ||||| || | Sbjct 44749 TTCAACTCGTCAGCGTTTTCACAGATGATCTTGT-ATGTTTCTTCTGAAATCATTGGTGA 44691 Query 24034 TTTAACGCCGGTCTTTGGATCGATCGCTTCATACATATCGATAATGACAT-CGAAAAAAG 24092 | | | | |||||||| | ||| || || | | | || | |||||| | Sbjct 44690 GTGCAAGTCAGTCTTTGGGTTGATGTACTCGTATAAAATCTTTGCAACTTGCGAAAACTG 44631 Query 24093 AATCTTTAGTCTCCTTGTGCAAATTAGACACGGCCAATCTAGCCGCAAGCAACGAATAGT 24152 || |||||| |||||||| || || ||||| | ||| || || | | || || | Sbjct 44630 TTTC-GTAGTCTGTTTGTGCAAGTTGGAAACGGCGATTCTTGCTGCCAAGATCGCGTAAT 44572 Query 24153 CGGAATGATCGATGGTCATGGCCGCTGCCGTCTCGGCGATTAGATTGTCCAATTCAGCGG 24212 | | |||| | | |||||| ||| || ||||| || | |||||||| ||| || Sbjct 44571 CTGGATGAATGGTTGTCATGTACGCAGCAGTCTCTGCAGCCAAGTTGTCCAACTCAATGG 44512 Query 24213 TGGTCACGCC 24222 |||| || || Sbjct 44511 TGGTGACACC 44502 >seq10 Length=432243 Score = 206 bits (228), Expect = 2e-48 Identities = 493/741 (67%), Gaps = 27/741 (4%) Strand=Plus/Minus Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 || |||||| | |||||||||||||| |||||||| || ||||| | |||||| | ||| Sbjct 413192 GAGATTTGGCAAATGTACAAAAAGGCCGAAGCATCTTTCTGGACTGCGGAAGAAATTGAC 413133 Query 57627 CTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAAT--CTGAGA--GAAATTTTAT 57682 |||| || || | | ||| ||| | | ||||| |||| | || | || | Sbjct 413132 TTGTCGAAAGACATCAACGACTGGAAGAAC-----AGAATGACTGACAACGAGAGATTCT 413078 Query 57683 TAAACAC----GTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGG 57738 | | | | |||||||| || || || || || || || ||||| || ||||| |||| Sbjct 413077 TCATCTCCAGAGTGTTGGCTTTCTTTGCTGCTTCGGACGGAATTGTCAATGAGAACTTGG 413018 Query 57739 TCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAG 57798 | || | ||||| || || || | | ||||| | ||| || |||||||| || Sbjct 413017 TGGAGAACTTTTCTGCTGAGGTCCAGATCCCAGAGGCCAAATGTTTCTACGGATTCCAGA 412958 Query 57799 TGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGG 57858 | || |||||| | || || |||| || || | | ||||| | ||| | || | Sbjct 412957 TCATGATGGAAAACATCCACTCGGAAACCTACTCTTTGTTGATCGACTCCTACATCAAAG 412898 Query 57859 ACAACGACGAGAAACGTAGACT----GTTCAACGCGATCGAAACAATGCCCGCGATCGCC 57914 || | ||| | |||| ||||||||| ||||||| || || || Sbjct 412897 ACCCTAAAGAG----GCTGACTTTTTGTTCAACGCTATCGAAAACATCCCTTGCATTAAG 412842 Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974 |||||||| |||||| | | | |||||| | || | |||| ||| ||||| || Sbjct 412841 AAGAAGGCCGAGTGGGCCTTGAGATGGATCGCAGACGACGAGGCCTTGTTTGCCGAAAGA 412782 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 | | || || || || ||||||||||| ||||| || ||| ||||| | || || Sbjct 412781 TTGGTGGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCTGGCTCGTTTGCCTCTATCTTC 412722 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| ||||||| | || ||||||| || || ||||| |||||| ||||| | | Sbjct 412721 TGGTTGAAGAAGAGAGGTTTGATGCCTGGTCTTACGTTCTCCAACGAATTGATTTGCAGA 412662 Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG 58154 ||||| ||| | || ||||| ||||| ||| | ||| ||||||| | ||| | ||| Sbjct 412661 GACGAAGGTTTGCACACTGACTTTGCCTGCTTGTTGTTCTCTCACTTGAACAACAGACCA 412602 Query 58155 ACGCGGGATCGCATCTTGG---ACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTT 58211 | | | | ||| ||| | ||||| || ||||| ||| | || ||||| || | Sbjct 412601 AACCCAGCT---ATCGTGGAGAAGATTATTACTGAGGCCGTCACTATTGAAAAAGAATAC 412545 Query 58212 GTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTAC 58271 | ||||| ||| | || | | || | || |||||| ||| ||||||| | ||| Sbjct 412544 TTTACCGATGCCTTGCCAGCAAGCTTGTTGGGAATGAACTGTGACTTGATGTGCCAATAC 412485 Query 58272 ATTGAGTTTGTTGCCGACAGA 58292 | ||||| |||||||| ||| Sbjct 412484 GTCGAGTTCGTTGCCGATAGA 412464 >seq14 Length=288459 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||| |||| || || || ||||| | || ||||| | || Sbjct 84617 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAGTCTTCT 84558 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| | ||| ||||||||||| | || || |||||| Sbjct 84557 GACACCATTGACAACGTTAAATCTAAAATTCAAGACAAGGAAGGAATTCCTCCAGACCAG 84498 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || |||||||| || || ||||||||| | ||| || ||| || ||| Sbjct 84497 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACAAC 84438 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| || || ||| | || |||| | ||| |||| || |||| Sbjct 84437 ATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGGTA 84389 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| |||||| |||| || || || ||||| | || |||||| | ||| Sbjct 84845 ATGCAAATTTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 84786 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || |||||||| || | || || |||||| Sbjct 84785 GACACAATTGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGACCAG 84726 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || |||||||| || || ||||||||| || || || || || ||| Sbjct 84725 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAAC 84666 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || ||||| || | || |||| | ||| |||| || |||| Sbjct 84665 ATTCAGAAGGAATCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGGTA 84617 >seq28 Length=63775 Score = 89.7 bits (98), Expect = 5e-13 Identities = 169/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 23323 ACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTA 23382 ||||||| || || ||||| || || |||| || | ||| || ||||| | || | Sbjct 54194 ACTCCACTTTCCGTTATTTTTCACCCGCTTCATGAATAAATCTGGGATCCACAAGGCAAA 54253 Query 23383 GAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTC 23442 ||||| || | || | || || || ||| |||||| | || | | || Sbjct 54254 GAACAAGTCTCTCGCTCTCAATTCATCAGGGCCATGATTCTTTCGAAGTTCAAGCACTTC 54313 Query 23443 CAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCC 23502 || | |||| | ||||| ||||||| ||||| ||||| |||||||||| || || || Sbjct 54314 CATGATGTCCCCGTGCCAAGGCTCGATGTAAATAGCAAATGCGCCCGGTCGTTTGTTTCC 54373 Query 23503 GCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTT 23562 ||||||||||| || | || ||||| ||| | ||| | | ||| || || | ||||| Sbjct 54374 TCCCTGATCGACATATCTTGCAGTGTTATTGAAGACTTTCAACATTGGAACTAATCCGTT 54433 Query 23563 GGACGCGCC 23571 || | ||| Sbjct 54434 TGAGGTGCC 54442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766104679760