Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq10 154 3e-32 >seq10 Length=432243 Score = 154 bits (170), Expect = 3e-32 Identities = 566/862 (66%), Gaps = 67/862 (8%) Strand=Plus/Minus Query 101516 TGGGAAATGTACAAAAAAGAGGTTGCCTGTTTTTGGACATTGGAAGAGATTGATTT--CG 101573 ||| ||||||||||||| | | || | ||| ||||| |||||| ||||| || || Sbjct 413186 TGGCAAATGTACAAAAAGGCCGAAGCATCTTTCTGGACTGCGGAAGAAATTGACTTGTCG 413127 Query 101574 AAAGGGATCCTAAAGATTGGGAGAA---ACTCACTCAAGATGAGAAGGATT--TCATTCT 101628 |||| ||| || || ||| |||| | | ||| | | |||| |||| |||| || Sbjct 413126 AAAGACATC--AACGACTGGAAGAACAGAATGACTGACAACGAGA--GATTCTTCAT-CT 413072 Query 101629 CCAGATTCT-GGCGTTCTTTGCATCCTCTGACGGAATTGTAATTGAAAATCTT-----AC 101682 ||||| | | ||| |||||||| | || ||||||||||| | ||| || ||| | Sbjct 413071 CCAGAGTGTTGGCTTTCTTTGCTGCTTCGGACGGAATTGTCAATGAGAA-CTTGGTGGAG 413013 Query 101683 AACACGTCTTCGTCAAGTGGCGCAGATTCCAGAAGCGAGGAGTTTCTTTGACTTCCAAGT 101742 ||| ||| | | || ||||| ||||| || | |||||| | ||||| | Sbjct 413012 AACTTTTCTGCT----GAGGTCCAGATCCCAGAGGCCAAATGTTTCTACGGATTCCAGAT 412957 Query 101743 TGGAATGGAGAGTATTCAT--GGCAACGTCTACGGAGAACTGATTGATAGACTGGTGCCC 101800 ||||| | || || || ||| |||| || ||||| |||| || Sbjct 412956 CATGATGGAAAACATCCACTCGGAAAC--CTACTCTT---TG-TTGATCGACT-----CC 412908 Query 101801 GACGAAAAAGACA------AGGCTATCTT---GTTTAACGCTGCACAACACTTCCCCGCC 101851 || |||||| ||||| ||| ||| |||||| || || |||| | Sbjct 412907 TACATCAAAGACCCTAAAGAGGCTGACTTTTTGTTCAACGCTATCGAAAACATCCCTTGC 412848 Query 101852 ATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGAT-GCAAAGCAATAACGATTTG---GC 101907 || |||||||||| ||||||| | | ||||| ||| | | | | | ||| || Sbjct 412847 ATTAAGAAGAAGGCCGAGTGGGCCTTGAGATGGATCGCAGA-CGACGAGGCCTTGTTTGC 412789 Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967 ||| | | || ||||||||||| || ||||| || ||||| ||| | || || || Sbjct 412788 CGAAAGATTGGTGGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCTGGCTCGTTTGCCTC 412729 Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027 || |||||| | ||||| || ||| | |||||||||| || | |||||| || || || Sbjct 412728 TATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGTCTTACGTTCTCCAACGAATTGAT 412669 Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGT 102087 || || ||||||||| | || |||||||| ||| || |||| | ||| Sbjct 412668 TTGCAGAGACGAAGGTTTGCACACTGACTTTGCCTGCTTGTTGTTCTCTCA----CTTG- 412614 Query 102088 TGATACCCCATCAAGAGAAAGGATTCTTG----AAATTGTCACTGAAGCCGTCCGAATTG 102143 | | | | ||| | || || || | ||| | ||||| |||||| |||| Sbjct 412613 -AACAACAGACCAA-ACCCAGCTATCGTGGAGAAGATTATTACTGAGGCCGTCACTATTG 412556 Query 102144 AACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGA 102203 || |||||| | || | | || |||| | | || ||||||||||||| | |||| Sbjct 412555 AAAAAGAATACTTTACCGATGCCTTGCCAGCAAGCTTGTTGGGAATGAACTGTGACTTGA 412496 Query 102204 TGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAA 102261 || |||| ||| | || || || || |||| | | | || | |||| || || || Sbjct 412495 TGTGCCAATACGTCGAGTTCGTTGCCGATAGATTGCTTGTGGCCTTGGGTAACAAG--AA 412438 Query 102262 GCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCG-AGAATAAGA 102320 | || ||||| |||||||| ||| || ||||| || |||||| | | || | |||| Sbjct 412437 GGTTTACAATGTCACCAACCCATTCGACTTTATGGAGAACATTTCCTTGGCAGGA-AAGA 412379 Query 102321 CCAACTTTTTTGAAAAGAGAGT 102342 |||||||||| || |||||||| Sbjct 412378 CCAACTTTTTCGAGAAGAGAGT 412357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583328010615