Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq13 297 2e-75
seq10 259 6e-64
seq28 111 2e-19
>seq13
Length=360411
Score = 297 bits (328), Expect = 2e-75
Identities = 1161/1817 (64%), Gaps = 45/1817 (2%)
Strand=Plus/Minus
Query 62085 TAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG 62144
|||||||| ||||| || | || ||||||||||||| ||||| || | ||
Sbjct 46576 TAGTACATACCCGTCTTCAATCCCTTCTTCCATCCGTAAAAGTGCATGGAAGTCAACTTA 46517
Query 62145 GAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCC 62204
| | || ||| || ||||| |||| || || ||||| || || || |
Sbjct 46516 CCCATAGTAGGTTCTCTGATGTGGATGTTCAACGACTGTGACTGATCAATAAACGCAGCT 46457
Query 62205 CTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACT 62264
||||| |||||||| | ||||| ||| || | |||||||| | |||||||| |
Sbjct 46456 CTGTCGGCAGCCATGTCAATGATATGCTTCTGAGAGATTTCCCACACGGTTTTATATAAA 46397
Query 62265 CGCTTAATATCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTACCATAATC 62321
||||| || || ||||| | |||| | |||||||||||| | | || ||
Sbjct 46396 CGCTTGATTTCGTCTGGGACATTTGGTAAAGACTGAATGGATCCGTTGTTGGCAATGATG 46337
Query 62322 CTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA--AACTC--TAAGGAGATG 62377
| ||||| || | |||||||| | | || || || || || | | | ||
Sbjct 46336 TTGTTCTTCATATTGTCATTCCAAA----TACCTAAGTCAACTAAGTCCTTCAACATGTG 46281
Query 62378 CGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATA 62437
|||||||| | ||||| || || | | ||||| | | |||||| || || ||
Sbjct 46280 TGGGTTAACAATCTGGAACTCGCCGGCAAGCACTCTTCTGGAGTAAATGTTGGATGTGTA 46221
Query 62438 CGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 62497
||||| | | || || || ||||| ||||||| ||| || || || ||||| || ||
Sbjct 46220 AGGTTCAAAGCATTCGTTGTTACCCAAGATTTGAGAAGTAGAGGCTGTTGGCATCGGAGC 46161
Query 62498 CACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATT 62557
|| | ||| |||||| ||||||| | | | || | || | | ||||| |
Sbjct 46160 AACAAGCAAAGAATTTCTGAGACCGTGTTTGGCCAAATTTTGCTTCAAAGTATCCCAGTC 46101
Query 62558 CCAAAGATCCGACGG-------TACAACANNNNNNNNNNNATATTGTAG-AATACCGTTA 62609
||| | || || || | | ||| || || | ||| || ||
Sbjct 46100 CCACAACTCGGATGGCTTTCTGTCCCACAAGTCG-------TACTGCAACAATCCCTTTG 46048
Query 62610 CTGGCGTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTC 62669
| | | || ||| ||||||| |||||||| ||||||| || ||| || | |
Sbjct 46047 ACGCAGGA-GAACCTTCATATGTCTCATATGGACCTTCCTCCTGAGCAAGCTCGATAGAT 45989
Query 62670 GCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCC 62729
|| || | ||| | | ||||||||| || || |||| | || | |||| ||||||
Sbjct 45988 GCTTCCACAGCAGCATGATAAATGGTCTCGAATATCTGAATGTTCAACTCTTTAGCTTCC 45929
Query 62730 GGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATA 62789
|| || || || | | ||| || || || || || | |||||||| |||| |
Sbjct 45928 TGGGAGTCGAAAGGCAATCTCAAGGACATGAATGCATCAGCAAGACCTTGAACTCCAAGA 45869
Query 62790 CCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATA 62849
| |||||||| | |||| |||| || || ||||| || ||| ||| |||| |
Sbjct 45868 GCAATAGGTCTGTTTCTCATATTGGATCTTCTGGCTTCCTCAACAGGGTAAAAATTTCTG 45809
Query 62850 TCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAA 62909
|| || ||| | || | ||||| || || ||| ||| || | || || |||
Sbjct 45808 TCAATGATTCTGTTCAAGTTTCTAGTAACAACCTTGGTCACCTCGTGCAACTTATCAAAG 45749
Query 62910 TC--------AAATCGCC-CATCTATTACAAACA-TGTT--CAATGCAACAGATGCCAGA 62957
| || | | ||||| | ||| | || ||| |||| || ||||
Sbjct 45748 TTGTACCAGGAACTAGATGCATCTTTCTCAACGAATGAAGGCAAAGCAATGGAGGCCAAG 45689
Query 62958 TTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTA 63017
||||| || || || || | | | || | | |||||| || | |||
Sbjct 45688 TTACAGACAGCAACTTCTTCTGGGGAAGAGTACTCGACAATCTCACAACACAAGTTAGAT 45629
Query 63018 CACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 63077
| |||||| | || || || | ||| ||| | || |||||||| |||||||| || |
Sbjct 45628 GATTTGATAATACCCAAGTTCTTTTGGTTAGTTTTCTTGTTACAAGCATCCTTGTACAAC 45569
Query 63078 ATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCC 63137
||||||||||| || || ||| | || | ||| | || | | ||| | | |||||
Sbjct 45568 ATGAATGGAGTTCCTGTCTCAGTTTGCGCTTCCAAGATAGAGTACCAAAGCTTTTGAGCC 45509
Query 63138 TTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCG 63197
|| | | ||| | | | |||||| || || ||||| ||| |||||
Sbjct 45508 TTGACGGTGGATCTTCCACGGCCTTCTCTCTCATACTTTTCGTACAAAGCTTCAAACTCA 45449
Query 63198 TCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCG 63257
|| || | |||| |||| | |||| ||||| ||| | | ||| | ||| || |||
Sbjct 45448 TCGCCGTAGACATCAGCCAAACCAGGAGCTTCATTTGGAGAAAACAAAGTCCAGTCACCG 45389
Query 63258 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTT 63317
| | | |||| ||||| || | ||| || ||||||||||| || | ||||||
Sbjct 45388 TTTTGTTCAACTCTCTTCATGAACAAATCCGGGATCCAAAGAGCAGGGAACAAATCTCTG 45329
Query 63318 GTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 63377
| |||| ||| || || || |||||| ||| |||| ||| | | ||| |||| |
Sbjct 45328 GCTCTAATTTCTTCCTTACCGTGGTTCTTTCTAATGTCGATGAAGTCGAAAATGTCAGCA 45269
Query 63378 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 63437
||||| || |||||||| || || | | | || |||| ||||| || || || || |
Sbjct 45268 TGCCAAGGCTCCAAGTAAATCGCAAAAGCGCCTGGCCTCTTGTTGCCACCTTGGTCGACA 45209
Query 63438 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTG 63497
|| | || ||||| || |||| | || ||||||||| |||||||| || |||| ||
Sbjct 45208 TAACGTGCTGTGTTGTTGAAAACACGCACCATTGGAATGATACCGTTAGAAGTACCGTTA 45149
Query 63498 GTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCT 63557
||||| | || || | ||| | | || || || | ||| || || ||
Sbjct 45148 GTACCTGCAATGTAAGCGCCAGTACTTCTGATGTTGTGGATGTGCAAACCAATACCACCA 45089
Query 63558 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCA 63617
|| | || || ||||| |||||| ||||| ||||| || || || || ||| |||
Sbjct 45088 GCACTCTTGGAAATTAAAGCGCATGTCTTTAATGTGTCGTAAATACCGTCGATGGAGTCA 45029
Query 63618 TCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAAT 63677
|| ||||| || || ||||| ||||||||| | | | || || ||||| ||
Sbjct 45028 TCCTTCATGGCAACAAGGAAACAAGACGACATTTGGGGGCTTGGGGTACCTGCATTGAAC 44969
Query 63678 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 63737
||||| |||||| |||| ||||| || | | || | | |||||| || || || |
Sbjct 44968 AAGGTTGGAGAACCGTGAGTAAAGTATCTCTGGGACATCAAATTGTAAGTTTCGATCACA 44909
Query 63738 GAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 63795
|| || | |||| ||||| || || || || | ||| | || ||||| ||||
Sbjct 44908 CGTTCAATGT--CATTCCCGTGAATACCAACCGCAACTCTCATGATCAAATGCTGTGGTC 44851
Query 63796 TTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 63855
||||| ||| || ||| | | | | |||||| ||| |||||||||| || ||||| |
Sbjct 44850 TTTCAGCAACCTTCCCGTTGACTCTGAGCAAGTATGATCTTTCCAAAGTCTTGAAACCGA 44791
Query 63856 AATAGTTGTA--TGAAA 63870
| |||||||| |||||
Sbjct 44790 AGTAGTTGTAGTTGAAA 44774
>seq10
Length=432243
Score = 259 bits (286), Expect = 6e-64
Identities = 581/865 (67%), Gaps = 22/865 (3%)
Strand=Plus/Plus
Query 33312 TTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 33371
|| |||||||| || || |||||| |||| || || || ||||| || || || || |||
Sbjct 412363 TTCTCGAAAAAGTTGGTCTTTCCTGCCAAGGAAATGTTCTCCATAAAGTCGAATGGGTTG 412422
Query 33372 GTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCT 33431
|| |||||||||| || || ||||| | || ||||||||| || ||||| ||
Sbjct 412423 GTGACATTGTAAACCTTCTTGTTACCCAAGGCCACAAGCAATCTATCGGCAACGAACTCG 412482
Query 33432 ATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTA 33491
| ||| ||||| ||||| |||||||| | | | |||| | || | |||
Sbjct 412483 ACGTATTGGCACATCAAGTCACAGTTCATTCCCAACAAGCTTGCTGGCAAGGCATCGGTA 412542
Query 33492 AGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAATCTA-ACGGTTTCTTCACT 33550
| |||||| |||||| | || || | || ||||| ||| ||| | || |
Sbjct 412543 AAGTATTCTTTTTCAATAGTGACGGCCTCAGTAATAATCT-TCTCCACGATAGCTGGGTT 412601
Query 33551 CGGTG-GATGTAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGT 33609
||| | ||| || || |||| ||| || || || || ||||| ||| ||||
Sbjct 412602 TGGTCTGTTGTTC-AAGTGAGAGAACAACAAGCAGGCAAAGTCAGTGTGCAAACCTTCGT 412660
Query 33610 CTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCC 33669
|||| | ||| |||||||| || ||||| || || ||||| | || | ||| || | ||
Sbjct 412661 CTCTGCAAATCAATTCGTTGGAGAACGTAAGACCAGGCATCAAACCTCTCTTCTTCAACC 412720
Query 33670 AAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAA 33729
| || || || || || || || || ||||| || ||||| || ||||||||||| | |
Sbjct 412721 AGAAGATAGAGGCAAACGAGCCAGAGAAGAAAATACCTTCGACAGCAGCAAAGGCCACCA 412780
Query 33730 GTCTCTCTCCATAACCGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCT 33786
||| || || | ||| ||| | | ||||| | ||||| ||||||||||
Sbjct 412781 ATCTTTCGGCAAACAAGGCCTCGTCGTCTGCGATCCATCTCAAGGCCCACTCGGCCTTCT 412840
Query 33787 TTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTT 33846
| || | ||||| || |||| || || || || | | ||| || ||| ||||
Sbjct 412841 TCTTAATGCAAGGGATGTTTTCGATAGCGTTGAACAAAAAGTCAGCCTCTTTAGGGTCTT 412900
Query 33847 TAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCT 33906
| | || | |||||||| | | || ||||||| || |||||||| || ||||
Sbjct 412901 TGATGTAGGAGTCGATCAACAAAGAGTAGGTTTCCGAGTGGATGTTTTCCATCATGATCT 412960
Query 33907 GAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCT--GC 33964
| ||||||||||||||| | ||||| | ||||| || || | | |||| ||||| |
Sbjct 412961 GGAATCCGTAGAAACATTTGGCCTCTGGGATCTGGACCTCAGCAGAAAA--GTTCTCCAC 413018
Query 33965 TAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA 34024
|| || ||||| || ||||| || || ||||| || ||||| || || ||
Sbjct 413019 CAAGTTCTCATTGACAATTCCGTCCGAAGCAGCAAAGAAAGCCAACACTCTGGAGATGAA 413078
Query 34025 ATATTTTTCGTCTGGTGTTAGT-------TTATTCCAATCATTGATATCTTTAGATATAT 34077
|| | |||| ||| ||| || ||||| || ||||| ||||| || | |
Sbjct 413079 GAATCTCTCGT----TGTCAGTCATTCTGTTCTTCCAGTCGTTGATGTCTTTCGACAAGT 413134
Query 34078 CCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCAT 34137
| | ||||||| | ||||| || ||||| || |||||||| ||||| | ||| || || |
Sbjct 413135 CAATTTCTTCCGCAGTCCAGAAAGATGCTTCGGCCTTTTTGTACATTTGCCAAATCTCGT 413194
Query 34138 GATATTGGATTGGGAAAATAACAAA 34162
|| | ||| ||||| | |||||
Sbjct 413195 TGTACTTGATAGGGAACAACACAAA 413219
>seq28
Length=63775
Score = 111 bits (122), Expect = 2e-19
Identities = 176/250 (70%), Gaps = 2/250 (1%)
Strand=Plus/Plus
Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307
||||| ||||| || ||||| || ||||| || | ||| || ||||| | || | ||
Sbjct 54197 CCACTTTCCGTTATTTTTCACCCGCTTCATGAATAAATCTGGGATCCACAAGGCAAAGAA 54256
Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367
| ||||| | ||| ||| || || ||||||| ||| || || | ||||
Sbjct 54257 CAAGTCTCTCGCTCTCAATTCATCAGGGCCATGATTCTTTCGAAGTTCAAGCACTTCCAT 54316
Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427
|| || ||||| || || | ||| || || | | || || ||||||||||||||
Sbjct 54317 GATGTCCCCGTGCCAAGGCTCGATGTAAATAGCAAATGCGCCCGGTCGTTTGTTTCCTCC 54376
Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA-TAATACCGTTTG 63486
|||||| | ||||| || |||||||| | ||| |||||||||||| |||| |||||||
Sbjct 54377 CTGATCGACATATCTTGCAGTGTTATTGAAGACTTTCAACATTGGAACTAAT-CCGTTTG 54435
Query 63487 ATATACCATT 63496
| | |||||
Sbjct 54436 AGGTGCCATT 54445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817182745840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |